RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W STU2P46675 888 aa5.38□□□□□ -1.55
SSO1YPL232W AMA1P50082 593 aa5.38□□□□□ -1.55
SSO1YPL232W HOS3Q02959 697 aaKnown RBP5.38□□□□□ -1.55
SSO1YPL232W YOL073CQ08232 322 aa5.38□□□□□ -1.55
SSO1YPL232W PNS1Q12412 539 aa5.38□□□□□ -1.55
SSO1YPL232W YPR015CQ12531 247 aa5.38□□□□□ -1.55
SSO1YPL232W PAB1P04147 577 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55 RIP-Chip
SSO1YPL232W BEM1P29366 551 aa5.37□□□□□ -1.55
SSO1YPL232W NPR3P38742 1146 aa5.37□□□□□ -1.55
SSO1YPL232W CHS7P38843 316 aa5.37□□□□□ -1.55
SSO1YPL232W ELO1P39540 310 aa5.37□□□□□ -1.55
SSO1YPL232W STL1P39932 569 aa5.37□□□□□ -1.55
SSO1YPL232W NBP35P52920 328 aa5.37□□□□□ -1.55
SSO1YPL232W AIM14P53109 570 aa5.37□□□□□ -1.55
SSO1YPL232W PUS2P53167 370 aa5.37□□□□□ -1.55
SSO1YPL232W ORC3P54790 616 aa5.37□□□□□ -1.55
SSO1YPL232W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SSO1YPL232W VPS20Q04272 221 aa5.37□□□□□ -1.55
SSO1YPL232W YMR018WQ04364 514 aa5.37□□□□□ -1.55
SSO1YPL232W COG4Q06096 861 aa5.37□□□□□ -1.55
SSO1YPL232W YOL075CQ08234 1294 aa5.37□□□□□ -1.55
SSO1YPL232W GYP1Q08484 637 aa5.37□□□□□ -1.55
SSO1YPL232W SEC39Q12745 709 aa5.37□□□□□ -1.55
SSO1YPL232W MIH1P23748 554 aa5.36□□□□□ -1.55
SSO1YPL232W SLD2P34252 453 aa5.36□□□□□ -1.55
SSO1YPL232W APM3P38153 483 aa5.36□□□□□ -1.55
SSO1YPL232W KAP104P38217 918 aaKnown RBP5.36□□□□□ -1.55
SSO1YPL232W HSL7P38274 827 aa5.36□□□□□ -1.55
SSO1YPL232W REF2P42073 533 aaPredicted RBP5.36□□□□□ -1.55
SSO1YPL232W ALR2P43553 858 aa5.36□□□□□ -1.55
SSO1YPL232W SNG1P46950 547 aa5.36□□□□□ -1.55
SSO1YPL232W GLG2P47011 380 aa5.36□□□□□ -1.55
SSO1YPL232W LSC2P53312 427 aa5.36□□□□□ -1.55
SSO1YPL232W YNR063WP53749 607 aa5.36□□□□□ -1.55
SSO1YPL232W SUR7P54003 302 aa5.36□□□□□ -1.55
SSO1YPL232W KTR6P54070 446 aa5.36□□□□□ -1.55
SSO1YPL232W YLR297WQ05899 129 aa5.36□□□□□ -1.55
SSO1YPL232W ATG10Q07879 167 aa5.36□□□□□ -1.55
SSO1YPL232W THI20Q08224 551 aa5.36□□□□□ -1.55
SSO1YPL232W FRE7Q12333 620 aa5.36□□□□□ -1.55
SSO1YPL232W PEX11Q12462 236 aa5.36□□□□□ -1.55
SSO1YPL232W STT4P37297 1900 aa5.36□□□□□ -1.55
SSO1YPL232W IPP1P00817 287 aaKnown RBP5.35□□□□□ -1.55
SSO1YPL232W RPL22AP05749 121 aaKnown RBP5.35□□□□□ -1.55
SSO1YPL232W SPT5P27692 1063 aaKnown RBP5.35□□□□□ -1.55
SSO1YPL232W PCA1P38360 1216 aa5.35□□□□□ -1.55
SSO1YPL232W SPT8P38915 602 aa5.35□□□□□ -1.55
SSO1YPL232W EDC3P39998 551 aaKnown RBP5.35□□□□□ -1.55
SSO1YPL232W MNT2P53059 558 aa5.35□□□□□ -1.55
SSO1YPL232W HOP2P53187 214 aa5.35□□□□□ -1.55
SSO1YPL232W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
SSO1YPL232W ADI1Q03677 179 aa5.35□□□□□ -1.55
SSO1YPL232W YDR444WQ04093 687 aa5.35□□□□□ -1.55
SSO1YPL232W ARA2Q04212 335 aa5.35□□□□□ -1.55
SSO1YPL232W SPP382Q06411 708 aaPredicted RBP5.35□□□□□ -1.55
SSO1YPL232W RPS3P05750 240 aaKnown RBP5.34□□□□□ -1.55
SSO1YPL232W MET16P18408 261 aaPredicted RBP5.34□□□□□ -1.55
SSO1YPL232W NAR1P23503 491 aaKnown RBP5.34□□□□□ -1.55
SSO1YPL232W LIP5P32875 414 aa5.34□□□□□ -1.55
SSO1YPL232W SRB2P34162 210 aa5.34□□□□□ -1.55
SSO1YPL232W YKL050CP35736 922 aa5.34□□□□□ -1.55
SSO1YPL232W QNS1P38795 714 aaKnown RBP5.34□□□□□ -1.55
SSO1YPL232W TMA108P40462 946 aa5.34□□□□□ -1.55
SSO1YPL232W PHO86P46956 311 aa5.34□□□□□ -1.55
SSO1YPL232W YTP1P53584 459 aa5.34□□□□□ -1.55
SSO1YPL232W YDR131CQ03899 556 aa5.34□□□□□ -1.55
SSO1YPL232W AAD4Q07747 329 aa5.34□□□□□ -1.55
SSO1YPL232W APL5Q08951 932 aaKnown RBP5.34□□□□□ -1.55
SSO1YPL232W TFB4Q12004 338 aa5.34□□□□□ -1.55
SSO1YPL232W SFI1Q12369 946 aa5.34□□□□□ -1.55
SSO1YPL232W EMP46Q12396 444 aa5.34□□□□□ -1.55
SSO1YPL232W HIS1P00498 297 aaKnown RBP5.33□□□□□ -1.56
SSO1YPL232W INH1P01097 85 aa5.33□□□□□ -1.56
SSO1YPL232W RAS1P01119 309 aa5.33□□□□□ -1.56
SSO1YPL232W MIS1P09440 975 aaKnown RBP5.33□□□□□ -1.56
SSO1YPL232W MRPL8P22353 238 aa5.33□□□□□ -1.56
SSO1YPL232W KAR9P32526 644 aa5.33□□□□□ -1.56
SSO1YPL232W PXL1P36166 706 aa5.33□□□□□ -1.56
SSO1YPL232W CBR1P38626 284 aaKnown RBP5.33□□□□□ -1.56
SSO1YPL232W FSH1P38777 243 aaKnown RBP5.33□□□□□ -1.56
SSO1YPL232W PRM9P39551 298 aa5.33□□□□□ -1.56
SSO1YPL232W CNN1P43618 361 aa5.33□□□□□ -1.56
SSO1YPL232W SET2P46995 733 aaKnown RBP5.33□□□□□ -1.56
SSO1YPL232W UBX6P47049 396 aa5.33□□□□□ -1.56
SSO1YPL232W PEX31P53203 462 aa5.33□□□□□ -1.56
SSO1YPL232W DOS2P54858 310 aa5.33□□□□□ -1.56
SSO1YPL232W RPL34AP87262 121 aaPredicted RBP5.33□□□□□ -1.56
SSO1YPL232W YMR178WQ03219 274 aaKnown RBP5.33□□□□□ -1.56
SSO1YPL232W MCP2Q06567 569 aa5.33□□□□□ -1.56
SSO1YPL232W SST2P11972 698 aaKnown RBP5.32□□□□□ -1.56
SSO1YPL232W PDR1P12383 1068 aa5.32□□□□□ -1.56
SSO1YPL232W PUT4P15380 627 aa5.32□□□□□ -1.56
SSO1YPL232W AMS1P22855 1083 aa5.32□□□□□ -1.56
SSO1YPL232W SNT1P25357 1226 aa5.32□□□□□ -1.56
SSO1YPL232W SAC6P32599 642 aaKnown RBP5.32□□□□□ -1.56
SSO1YPL232W ADD66P36040 267 aa5.32□□□□□ -1.56
SSO1YPL232W FUI1P38196 639 aa5.32□□□□□ -1.56
SSO1YPL232W EFM2P38347 419 aa5.32□□□□□ -1.56
SSO1YPL232W SRP68P38687 599 aaKnown RBP5.32□□□□□ -1.56
SSO1YPL232W BCD1P38772 366 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms