RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	MTC7	P32633	139 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	UBS1	P38290	277 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	YHR097C	P38809	366 aa	Known RBP	4.68	□□□□□ -1.66
YTM1	YOR272W	STL1	P39932	569 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	TMN3	P40071	706 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	MTD1	Q02046	320 aa	Known RBP	4.68	□□□□□ -1.66
YTM1	YOR272W	SND1	Q04007	877 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	YCG1	Q06680	1035 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	YOR378W	Q08902	515 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	TAF3	Q12297	353 aa		4.68	□□□□□ -1.66
YTM1	YOR272W	GFA1	P14742	717 aa	Known RBP	4.67	□□□□□ -1.66
YTM1	YOR272W	KCC4	P25389	1037 aa		4.67	□□□□□ -1.66
YTM1	YOR272W	CWH43	P25618	953 aa		4.67	□□□□□ -1.66
YTM1	YOR272W	KSP1	P38691	1029 aa	Known RBP	4.67	□□□□□ -1.66
YTM1	YOR272W	SSP120	P39931	234 aa	Known RBP	4.67	□□□□□ -1.66
YTM1	YOR272W	YEL025C	P39991	1188 aa		4.67	□□□□□ -1.66
YTM1	YOR272W	NOP58	Q12499	511 aa	Known RBP	4.67	□□□□□ -1.66
YTM1	YOR272W	EDE1	P34216	1381 aa		4.67	□□□□□ -1.66
YTM1	YOR272W	TUP1	P16649	713 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	EAF5	P39995	279 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	THI6	P41835	540 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	CCT7	P42943	550 aa	Known RBP	4.66	□□□□□ -1.66
YTM1	YOR272W	NMA2	P53204	395 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	YGR054W	P53235	642 aa	Known RBP	4.66	□□□□□ -1.66
YTM1	YOR272W	DIP5	P53388	608 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	DAK1	P54838	584 aa	Known RBP	4.66	□□□□□ -1.66
YTM1	YOR272W	UFO1	Q04511	668 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	RKI1	Q12189	258 aa		4.66	□□□□□ -1.66
YTM1	YOR272W	RMA1	P36001	430 aa	Known RBP	4.65	□□□□□ -1.66
YTM1	YOR272W	DHR2	P36009	735 aa	Predicted RBP	4.65	□□□□□ -1.66
YTM1	YOR272W	ELF1	P36053	145 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	PPE1	P38796	400 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	RAD26	P40352	1085 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	DJP1	P40564	432 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	QRI1	P43123	477 aa	Known RBP	4.65	□□□□□ -1.66
YTM1	YOR272W	TAH11	P47112	604 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	VPS73	P53142	486 aa	Known RBP	4.65	□□□□□ -1.66
YTM1	YOR272W	MDR1	P53258	950 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	SPC98	P53540	846 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	CNM67	P53865	581 aa	Known RBP	4.65	□□□□□ -1.66
YTM1	YOR272W	YNL034W	P53963	612 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	YNL018C	P53976	612 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	TGL2	P54857	326 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
YTM1	YOR272W	MHP1	P43638	1398 aa		4.65	□□□□□ -1.66
YTM1	YOR272W	NIC96	P34077	839 aa		4.65	□□□□□ -1.67
YTM1	YOR272W	YIL092W	P40497	633 aa		4.65	□□□□□ -1.67
YTM1	YOR272W	YDL183C	P48569	320 aa		4.65	□□□□□ -1.67
YTM1	YOR272W	TIM50	Q02776	476 aa		4.65	□□□□□ -1.67
YTM1	YOR272W	PSF3	Q12146	194 aa		4.65	□□□□□ -1.67
YTM1	YOR272W	NUP192	P47054	1683 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	SEC12	P11655	471 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	HOP1	P20050	605 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	SDS22	P36047	338 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	LRO1	P40345	661 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	SMC3	P47037	1230 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	MNT2	P53059	558 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	NGL2	Q03264	515 aa	Known RBP	4.64	□□□□□ -1.67
YTM1	YOR272W	EFR3	Q03653	782 aa	Known RBP	4.64	□□□□□ -1.67
YTM1	YOR272W	GIS1	Q03833	894 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	IOC4	Q04213	475 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	ARR3	Q06598	404 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	HOS1	Q12214	470 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	MPD2	Q99316	277 aa		4.64	□□□□□ -1.67
YTM1	YOR272W	LAM4	P38800	1345 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	RPN13	O13563	156 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	ATP4	P05626	244 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	PCT1	P13259	424 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	VPS33	P20795	691 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	CAP1	P28495	268 aa	Known RBP	4.63	□□□□□ -1.67
YTM1	YOR272W	PET309	P32522	965 aa	Predicted RBP	4.63	□□□□□ -1.67
YTM1	YOR272W	TAF5	P38129	798 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	EHT1	P38295	451 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	TDP1	P38319	544 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	YJL193W	P39542	402 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	SAW1	P39735	261 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	YIL166C	P40445	542 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	SNF12	P53628	566 aa		4.63	□□□□□ -1.67
YTM1	YOR272W	SST2	P11972	698 aa	Known RBP	4.62	□□□□□ -1.67
YTM1	YOR272W	PHO3	P24031	467 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	YKL133C	P36066	463 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	MRPL7	P36519	292 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	MAD2	P40958	196 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	PMT6	P42934	759 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	PUS4	P48567	403 aa	Known RBP	4.62	□□□□□ -1.67
YTM1	YOR272W	VPS4	P52917	437 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	TRI1	Q05024	226 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	NUR1	Q12066	484 aa		4.62	□□□□□ -1.67
YTM1	YOR272W	RTK1	Q12100	620 aa	Predicted RBP	4.62	□□□□□ -1.67
YTM1	YOR272W	HSP82	P02829	709 aa	Known RBP	4.61	□□□□□ -1.67
YTM1	YOR272W	SWE1	P32944	819 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	TGL1	P34163	548 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	ASK10	P48361	1146 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	YNR071C	P53757	342 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	MFM1	Q02783	413 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	PLP2	Q12017	286 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	DIN7	Q12086	430 aa		4.61	□□□□□ -1.67
YTM1	YOR272W	MDM20	Q12387	796 aa	Known RBP	4.61	□□□□□ -1.67
YTM1	YOR272W	YRF1-2	P40105	1681 aa		4.6	□□□□□ -1.67
YTM1	YOR272W	MSP1	P28737	362 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms