RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W ERG13P54839 491 aaKnown RBP3.33□□□□□ -1.88
CTK3YML112W MTD1Q02046 320 aaKnown RBP3.33□□□□□ -1.88
CTK3YML112W BSP1Q06604 576 aa3.33□□□□□ -1.88
CTK3YML112W TRE2Q08693 809 aa3.33□□□□□ -1.88
CTK3YML112W AHA1Q12449 350 aaKnown RBP3.33□□□□□ -1.88
CTK3YML112W URE2P23202 354 aaKnown RBP3.32□□□□□ -1.88
CTK3YML112W HEM12P32347 362 aaPredicted RBP3.32□□□□□ -1.88
CTK3YML112W CDC5P32562 705 aa3.32□□□□□ -1.88
CTK3YML112W YBR071WP38243 211 aa3.32□□□□□ -1.88
CTK3YML112W BPL1P48445 690 aaPredicted RBP3.32□□□□□ -1.88
CTK3YML112W MPS1P54199 764 aa3.32□□□□□ -1.88
CTK3YML112W RSC9Q03124 581 aa3.32□□□□□ -1.88
CTK3YML112W HRD3Q05787 833 aa3.32□□□□□ -1.88
CTK3YML112W GEP3Q08622 556 aa3.32□□□□□ -1.88
CTK3YML112W HOS1Q12214 470 aa3.32□□□□□ -1.88
CTK3YML112W ARG1P22768 420 aa3.31□□□□□ -1.88
CTK3YML112W YJU2P28320 278 aaPredicted RBP3.31□□□□□ -1.88
CTK3YML112W EMP65P40085 556 aa3.31□□□□□ -1.88
CTK3YML112W YIL092WP40497 633 aa3.31□□□□□ -1.88
CTK3YML112W COS12P53053 380 aa3.31□□□□□ -1.88
CTK3YML112W IDP3P53982 420 aaKnown RBP3.31□□□□□ -1.88
CTK3YML112W ECM38Q05902 660 aaPredicted RBP3.31□□□□□ -1.88
CTK3YML112W SPN1Q06505 410 aaPredicted RBP3.31□□□□□ -1.88
CTK3YML112W CRT10Q08226 957 aa3.31□□□□□ -1.88
CTK3YML112W DIN7Q12086 430 aa3.31□□□□□ -1.88
CTK3YML112W RTK1Q12100 620 aaPredicted RBP3.31□□□□□ -1.88
CTK3YML112W YLR111WQ12528 110 aa3.31□□□□□ -1.88
CTK3YML112W URA3P03962 267 aa3.3□□□□□ -1.88
CTK3YML112W CBP3P21560 335 aa3.3□□□□□ -1.88
CTK3YML112W PET309P32522 965 aaPredicted RBP3.3□□□□□ -1.88
CTK3YML112W GRX4P32642 244 aa3.3□□□□□ -1.88
CTK3YML112W ECM32P32644 1121 aaKnown RBP3.3□□□□□ -1.88
CTK3YML112W SDH8P38345 138 aa3.3□□□□□ -1.88
CTK3YML112W STL1P39932 569 aa3.3□□□□□ -1.88
CTK3YML112W MAD2P40958 196 aa3.3□□□□□ -1.88
CTK3YML112W HOL1P53389 586 aa3.3□□□□□ -1.88
CTK3YML112W YNL092WP53934 400 aa3.3□□□□□ -1.88
CTK3YML112W RAD33Q04231 177 aa3.3□□□□□ -1.88
CTK3YML112W TMA17Q12513 150 aa3.3□□□□□ -1.88
CTK3YML112W BI2P03873 423 aa3.29□□□□□ -1.88
CTK3YML112W TSR4P25040 408 aa3.29□□□□□ -1.88
CTK3YML112W YJR120WP47157 116 aa3.29□□□□□ -1.88
CTK3YML112W YNR071CP53757 342 aa3.29□□□□□ -1.88
CTK3YML112W TPO3Q06451 622 aa3.29□□□□□ -1.88
CTK3YML112W GDA1P32621 518 aa3.28□□□□□ -1.88
CTK3YML112W STB5P38699 743 aa3.28□□□□□ -1.88
CTK3YML112W MTG2P38860 518 aa3.28□□□□□ -1.88
CTK3YML112W SSP120P39931 234 aaKnown RBP3.28□□□□□ -1.88
CTK3YML112W LAS21P40367 830 aa3.28□□□□□ -1.88
CTK3YML112W YNL058CP53947 316 aa3.28□□□□□ -1.88
CTK3YML112W YPL071CQ02864 156 aa3.28□□□□□ -1.88
CTK3YML112W CYK3Q07533 885 aa3.28□□□□□ -1.88
CTK3YML112W PEX15Q08215 383 aa3.28□□□□□ -1.88
CTK3YML112W CIR2Q08822 631 aa3.28□□□□□ -1.88
CTK3YML112W YMR085WP0CF18 432 aa3.27□□□□□ -1.89
CTK3YML112W KAR1P11927 433 aa3.27□□□□□ -1.89
CTK3YML112W JHD1P40034 492 aa3.27□□□□□ -1.89
CTK3YML112W GSM1P42950 618 aa3.27□□□□□ -1.89
CTK3YML112W IRC7P43623 340 aa3.27□□□□□ -1.89
CTK3YML112W COG6P53959 839 aa3.27□□□□□ -1.89
CTK3YML112W YPL068CQ02749 293 aa3.27□□□□□ -1.89
CTK3YML112W CRC1Q12289 327 aa3.27□□□□□ -1.89
CTK3YML112W PNO1Q99216 274 aaKnown RBP3.27□□□□□ -1.89
CTK3YML112W CHO2P05374 869 aaKnown RBP3.26□□□□□ -1.89
CTK3YML112W YAP1P19880 650 aaKnown RBP3.26□□□□□ -1.89
CTK3YML112W ENP1P38333 483 aaKnown RBP3.26□□□□□ -1.89
CTK3YML112W RRP8P38961 392 aaKnown RBP3.26□□□□□ -1.89
CTK3YML112W MAM1P40065 302 aa3.26□□□□□ -1.89
CTK3YML112W MNT3P40549 630 aa3.26□□□□□ -1.89
CTK3YML112W IDS2P46958 469 aa3.26□□□□□ -1.89
CTK3YML112W COG2P53271 262 aa3.26□□□□□ -1.89
CTK3YML112W UBP16Q02863 499 aa3.26□□□□□ -1.89
CTK3YML112W YML119WQ03208 357 aa3.26□□□□□ -1.89
CTK3YML112W SLX4Q12098 748 aa3.26□□□□□ -1.89
CTK3YML112W AMD2P22580 549 aa3.25□□□□□ -1.89
CTK3YML112W MAK32P23060 363 aa3.25□□□□□ -1.89
CTK3YML112W PLC1P32383 869 aa3.25□□□□□ -1.89
CTK3YML112W TFC4P33339 1025 aa3.25□□□□□ -1.89
CTK3YML112W IMD2P38697 523 aaKnown RBP3.25□□□□□ -1.89
CTK3YML112W SPC97P38863 823 aa3.25□□□□□ -1.89
CTK3YML112W VPS8P39702 1274 aa3.25□□□□□ -1.89
CTK3YML112W CIR1P42940 261 aa3.25□□□□□ -1.89
CTK3YML112W IMD3P50095 523 aaKnown RBP3.25□□□□□ -1.89
CTK3YML112W SCS3P53012 380 aa3.25□□□□□ -1.89
CTK3YML112W TRI1Q05024 226 aa3.25□□□□□ -1.89
CTK3YML112W DBP10Q12389 995 aaKnown RBP3.25□□□□□ -1.89
CTK3YML112W CET1O13297 549 aaPredicted RBP3.24□□□□□ -1.89
CTK3YML112W YPR089WO13585 888 aa3.24□□□□□ -1.89
CTK3YML112W RRP43P25359 394 aaPredicted RBP3.24□□□□□ -1.89
CTK3YML112W PRP45P28004 379 aaPredicted RBP3.24□□□□□ -1.89
CTK3YML112W PRE2P30656 287 aaKnown RBP3.24□□□□□ -1.89
CTK3YML112W LNP1P38878 278 aa3.24□□□□□ -1.89
CTK3YML112W VFA1P40080 203 aa3.24□□□□□ -1.89
CTK3YML112W PCI8P40512 444 aa3.24□□□□□ -1.89
CTK3YML112W YIL024CP40543 189 aa3.24□□□□□ -1.89
CTK3YML112W SCW4P53334 386 aaKnown RBP3.24□□□□□ -1.89
CTK3YML112W PHM6Q05637 104 aa3.24□□□□□ -1.89
CTK3YML112W Q0010Q9ZZX9 128 aa3.24□□□□□ -1.89
CTK3YML112W RTC1Q08281 1341 aa3.23□□□□□ -1.89
CTK3YML112W TGL1P34163 548 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms