RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	SNF7	P39929	240 aa	Known RBP	7.01	□□□□□ -1.29
TSR2	YLR435W	SIP5	P40210	489 aa	Known RBP	7.01	□□□□□ -1.29
TSR2	YLR435W	DAS1	P47005	663 aa		7.01	□□□□□ -1.29
TSR2	YLR435W	SPT20	P50875	604 aa		7.01	□□□□□ -1.29
TSR2	YLR435W	GCN5	Q03330	439 aa		7.01	□□□□□ -1.29
TSR2	YLR435W	PIG1	Q06216	648 aa		7.01	□□□□□ -1.29
TSR2	YLR435W	SPO75	Q07798	868 aa		7.01	□□□□□ -1.29
TSR2	YLR435W	SGT2	Q12118	346 aa	Known RBP	7.01	□□□□□ -1.29
TSR2	YLR435W	SNF1	P06782	633 aa	Known RBP	7	□□□□□ -1.29
TSR2	YLR435W	MAS1	P10507	462 aa		7	□□□□□ -1.29
TSR2	YLR435W	VPS3	P23643	1011 aa		7	□□□□□ -1.29
TSR2	YLR435W	CYS3	P31373	394 aa	Known RBP	7	□□□□□ -1.29
TSR2	YLR435W	SWI3	P32591	825 aa		7	□□□□□ -1.29
TSR2	YLR435W	ABZ1	P37254	787 aa	Predicted RBP	7	□□□□□ -1.29
TSR2	YLR435W	HMT1	P38074	348 aa		7	□□□□□ -1.29
TSR2	YLR435W	MEF2	P39677	819 aa		7	□□□□□ -1.29
TSR2	YLR435W	FTR1	P40088	404 aa		7	□□□□□ -1.29
TSR2	YLR435W	CNN1	P43618	361 aa		7	□□□□□ -1.29
TSR2	YLR435W	GFD1	Q04839	188 aa	Known RBP	7	□□□□□ -1.29
TSR2	YLR435W	HCR1	Q05775	265 aa	Known RBP	7	□□□□□ -1.29
TSR2	YLR435W	IWR1	Q07532	353 aa	Predicted RBP	7	□□□□□ -1.29
TSR2	YLR435W	ABP140	Q08641	628 aa	Known RBP	7	□□□□□ -1.29
TSR2	YLR435W	TMA16	Q08687	178 aa		7	□□□□□ -1.29
TSR2	YLR435W	GAL80	P04387	435 aa		6.99	□□□□□ -1.29
TSR2	YLR435W	PDE1	P22434	369 aa		6.99	□□□□□ -1.29
TSR2	YLR435W	RAD27	P26793	382 aa		6.99	□□□□□ -1.29
TSR2	YLR435W	SPT8	P38915	602 aa		6.99	□□□□□ -1.29
TSR2	YLR435W	MMF1	P40185	145 aa	Known RBP	6.99	□□□□□ -1.29
TSR2	YLR435W	POL31	P46957	487 aa		6.99	□□□□□ -1.29
TSR2	YLR435W	RSM24	Q03976	319 aa		6.99	□□□□□ -1.29
TSR2	YLR435W	GCR1	P07261	785 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	SPE1	P08432	466 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	YER152C	P10356	443 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	NAT1	P12945	854 aa	Known RBP	6.98	□□□□□ -1.29
TSR2	YLR435W	ATE1	P16639	503 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	CDC42	P19073	191 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	PGS1	P25578	521 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	MLS1	P30952	554 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	YBR056W	P38081	501 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	YBR284W	P38150	797 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	SIF2	P38262	535 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	YFL054C	P43549	646 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	SMC3	P47037	1230 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	ZAP1	P47043	880 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	CPR7	P47103	393 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	SPR28	Q04921	423 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	COG4	Q06096	861 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	SDH5	Q08230	162 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	SGO1	Q08490	590 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	CWC2	Q12046	339 aa	Predicted RBP	6.98	□□□□□ -1.29
TSR2	YLR435W	YPR027C	Q12079	277 aa		6.98	□□□□□ -1.29
TSR2	YLR435W	GAL10	P04397	699 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	ATP1	P07251	545 aa	Known RBP	6.97	□□□□□ -1.29
TSR2	YLR435W	CHS1	P08004	1131 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	CTS1	P29029	562 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	EFB1	P32471	206 aa	Known RBP	6.97	□□□□□ -1.29
TSR2	YLR435W	XRS2	P33301	854 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	SAH1	P39954	449 aa	Known RBP	6.97	□□□□□ -1.29
TSR2	YLR435W	FYV8	P46949	817 aa	Known RBP	6.97	□□□□□ -1.29
TSR2	YLR435W	RPA49	Q01080	415 aa	Predicted RBP	6.97	□□□□□ -1.29
TSR2	YLR435W	MUB1	Q03162	620 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	WAR1	Q03631	944 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	ROT1	Q03691	256 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	TIF35	Q04067	274 aa	Known RBP	6.97	□□□□□ -1.29
TSR2	YLR435W	YLR297W	Q05899	129 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	HRT3	Q12347	344 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	APM4	Q99186	491 aa		6.97	□□□□□ -1.29
TSR2	YLR435W	FAB1	P34756	2278 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	KGD2	P19262	463 aa	Predicted RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	APL1	P27351	700 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	SEC65	P29478	273 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	VPH1	P32563	840 aa	Known RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	SLA2	P33338	968 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	MIP6	P38760	659 aa	Known RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	KAP123	P40069	1113 aa	Known RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.96	□□□□□ -1.3	not detected
TSR2	YLR435W	EAF7	P53911	425 aa	Known RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	ADA2	Q02336	434 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	PPM1	Q04081	328 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	PRM6	Q04705	352 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	CSR1	Q06705	408 aa	Known RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	LEA1	Q08963	238 aa	Predicted RBP	6.96	□□□□□ -1.3
TSR2	YLR435W	GIS3	Q12418	502 aa		6.96	□□□□□ -1.3
TSR2	YLR435W	TPK1	P06244	397 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	CMP2	P14747	604 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	APE1	P14904	514 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	RNR1	P21524	888 aa	Known RBP	6.95	□□□□□ -1.3
TSR2	YLR435W	DAL2	P25335	343 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	PPZ1	P26570	692 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	FRE1	P32791	686 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	CTM1	P38818	585 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	GEM1	P39722	662 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	MOB1	P40484	314 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	COS5	P47187	383 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
TSR2	YLR435W	TSR1	Q07381	788 aa	Known RBP	6.95	□□□□□ -1.3
TSR2	YLR435W	FMP25	Q08023	583 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	RRD2	Q12461	358 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	ECM3	Q99252	613 aa		6.95	□□□□□ -1.3
TSR2	YLR435W	COX11	P19516	300 aa	Known RBP	6.94	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms