RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C PPH22P23595 377 aa10.74□□□□□ -0.69
SHM2YLR058C TPS2P31688 896 aaKnown RBP10.74□□□□□ -0.69
SHM2YLR058C PPE1P38796 400 aa10.74□□□□□ -0.69
SHM2YLR058C ATM1P40416 690 aa10.74□□□□□ -0.69
SHM2YLR058C EMW1P42842 904 aaKnown RBP10.74□□□□□ -0.69
SHM2YLR058C RPS10BP46784 105 aaKnown RBP10.74□□□□□ -0.69
SHM2YLR058C YJR039WP47107 1121 aa10.74□□□□□ -0.69
SHM2YLR058C YJR079WP47126 109 aa10.74□□□□□ -0.69
SHM2YLR058C MRX6P48564 524 aa10.74□□□□□ -0.69
SHM2YLR058C TRM112P53738 135 aaPredicted RBP10.74□□□□□ -0.69
SHM2YLR058C PNP1Q05788 311 aa10.74□□□□□ -0.69
SHM2YLR058C ECM38Q05902 660 aaPredicted RBP10.74□□□□□ -0.69
SHM2YLR058C RPS10AQ08745 105 aaPredicted RBP10.74□□□□□ -0.69
SHM2YLR058C YOR387CQ08910 206 aa10.74□□□□□ -0.69
SHM2YLR058C YKL068W-AQ3E826 78 aa10.74□□□□□ -0.69
SHM2YLR058C AI5_ALPHAQ9ZZX1 630 aa10.74□□□□□ -0.69
SHM2YLR058C QCR6P00127 147 aa10.73□□□□□ -0.69
SHM2YLR058C CMD1P06787 147 aaKnown RBP10.73□□□□□ -0.69
SHM2YLR058C SEC6P32844 805 aa10.73□□□□□ -0.69
SHM2YLR058C MUD2P36084 527 aaKnown RBP10.73□□□□□ -0.69
SHM2YLR058C YIL161WP40449 235 aaKnown RBP10.73□□□□□ -0.69
SHM2YLR058C OYE3P41816 400 aaPredicted RBP10.73□□□□□ -0.69
SHM2YLR058C YJL132WP47014 750 aa10.73□□□□□ -0.69
SHM2YLR058C INP2Q03824 705 aa10.73□□□□□ -0.69
SHM2YLR058C NRT1Q08485 598 aa10.73□□□□□ -0.69
SHM2YLR058C IMA3P0CW40 589 aa10.72□□□□□ -0.69
SHM2YLR058C IMA4P0CW41 589 aa10.72□□□□□ -0.69
SHM2YLR058C MET22P32179 357 aa10.72□□□□□ -0.69
SHM2YLR058C PSE1P32337 1089 aaKnown RBP10.72□□□□□ -0.69
SHM2YLR058C YBP1P38315 674 aa10.72□□□□□ -0.69
SHM2YLR058C MSR1P38714 643 aa10.72□□□□□ -0.69
SHM2YLR058C SAP1P39955 897 aaKnown RBP10.72□□□□□ -0.69
SHM2YLR058C SCC4P40090 624 aa10.72□□□□□ -0.69
SHM2YLR058C TAN1P53072 289 aaPredicted RBP10.72□□□□□ -0.69
SHM2YLR058C NRD1P53617 575 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
SHM2YLR058C NSE5Q03718 556 aa10.72□□□□□ -0.69
SHM2YLR058C IMA2Q08295 589 aa10.72□□□□□ -0.69
SHM2YLR058C RAD1P06777 1100 aa10.71□□□□□ -0.69
SHM2YLR058C ADH4P10127 382 aa10.71□□□□□ -0.69
SHM2YLR058C HEM15P16622 393 aa10.71□□□□□ -0.69
SHM2YLR058C RPC37P36121 282 aa10.71□□□□□ -0.69
SHM2YLR058C KTR4P38131 464 aa10.71□□□□□ -0.69
SHM2YLR058C FUI1P38196 639 aa10.71□□□□□ -0.69
SHM2YLR058C KAP104P38217 918 aaKnown RBP10.71□□□□□ -0.69
SHM2YLR058C ATG12P38316 186 aa10.71□□□□□ -0.69
SHM2YLR058C KTR7P40504 517 aa10.71□□□□□ -0.69
SHM2YLR058C LSB6P42951 607 aa10.71□□□□□ -0.69
SHM2YLR058C PRP24P49960 444 aaKnown RBP10.71□□□□□ -0.69
SHM2YLR058C CPR6P53691 371 aaKnown RBP10.71□□□□□ -0.69
SHM2YLR058C COG6P53959 839 aa10.71□□□□□ -0.69
SHM2YLR058C LEE1Q02799 301 aaKnown RBP10.71□□□□□ -0.69
SHM2YLR058C SWC7Q06707 132 aa10.71□□□□□ -0.69
SHM2YLR058C AAD15Q08361 143 aa10.71□□□□□ -0.69
SHM2YLR058C TSR4P25040 408 aa10.7□□□□□ -0.7
SHM2YLR058C UTR2P32623 467 aa10.7□□□□□ -0.7
SHM2YLR058C ECM32P32644 1121 aaKnown RBP10.7□□□□□ -0.7
SHM2YLR058C YME1P32795 747 aa10.7□□□□□ -0.7
SHM2YLR058C SGE1P33335 543 aa10.7□□□□□ -0.7
SHM2YLR058C YAT2P40017 923 aa10.7□□□□□ -0.7
SHM2YLR058C SMX2P40204 77 aaKnown RBP10.7□□□□□ -0.7
SHM2YLR058C BST1P43571 1029 aa10.7□□□□□ -0.7
SHM2YLR058C YPR003CP53394 754 aa10.7□□□□□ -0.7
SHM2YLR058C RPN4Q03465 531 aa10.7□□□□□ -0.7
SHM2YLR058C SGO1Q08490 590 aa10.7□□□□□ -0.7
SHM2YLR058C AFI1Q99222 893 aa10.7□□□□□ -0.7
SHM2YLR058C PYC1P11154 1178 aaKnown RBP10.69□□□□□ -0.7
SHM2YLR058C CCT2P39076 527 aaKnown RBP10.69□□□□□ -0.7
SHM2YLR058C IML2P47031 731 aa10.69□□□□□ -0.7
SHM2YLR058C TAH11P47112 604 aa10.69□□□□□ -0.7
SHM2YLR058C RTA1P53047 317 aa10.69□□□□□ -0.7
SHM2YLR058C ADI1Q03677 179 aa10.69□□□□□ -0.7
SHM2YLR058C YMR160WQ03823 816 aa10.69□□□□□ -0.7
SHM2YLR058C YMR027WQ04371 470 aa10.69□□□□□ -0.7
SHM2YLR058C RTN1Q04947 295 aaKnown RBP10.69□□□□□ -0.7
SHM2YLR058C ARP9Q05123 467 aa10.69□□□□□ -0.7
SHM2YLR058C STE23Q06010 1027 aa10.69□□□□□ -0.7
SHM2YLR058C FRA1Q07825 749 aa10.69□□□□□ -0.7
SHM2YLR058C ARG4P04076 463 aaPredicted RBP10.68□□□□□ -0.7
SHM2YLR058C RPB2P08518 1224 aaKnown RBP10.68□□□□□ -0.7
SHM2YLR058C CDC20P26309 610 aa10.68□□□□□ -0.7
SHM2YLR058C URA7P28274 579 aaKnown RBP10.68□□□□□ -0.7
SHM2YLR058C PMI40P29952 429 aaKnown RBP10.68□□□□□ -0.7
SHM2YLR058C VAC8P39968 578 aa10.68□□□□□ -0.7
SHM2YLR058C DLD2P46681 530 aaKnown RBP10.68□□□□□ -0.7
SHM2YLR058C SAE2P46946 345 aa10.68□□□□□ -0.7
SHM2YLR058C PCL10P53124 433 aa10.68□□□□□ -0.7
SHM2YLR058C SHR3Q02774 210 aa10.68□□□□□ -0.7
SHM2YLR058C PML39Q03760 334 aa10.68□□□□□ -0.7
SHM2YLR058C ENT5Q03769 411 aaKnown RBP10.68□□□□□ -0.7
SHM2YLR058C YCS4Q06156 1176 aa10.68□□□□□ -0.7
SHM2YLR058C YLR012CQ07927 99 aa10.68□□□□□ -0.7
SHM2YLR058C MIS1P09440 975 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C HSF1P10961 833 aa10.67□□□□□ -0.7
SHM2YLR058C MRS6P32864 603 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C KES1P35844 434 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C ALA1P40825 983 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C TRF5P48561 642 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C DOS2P54858 310 aa10.67□□□□□ -0.7
SHM2YLR058C TOF2Q02208 771 aa10.67□□□□□ -0.7
SHM2YLR058C YDR344CQ05510 147 aa10.67□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms