RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSL1	YLR005W	YAP6	Q03935	383 aa		4.19	□□□□□ -1.74
SSL1	YLR005W	SIZ1	Q04195	904 aa		4.19	□□□□□ -1.74
SSL1	YLR005W	TAF10	Q12030	206 aa		4.19	□□□□□ -1.74
SSL1	YLR005W	ZPS1	Q12512	249 aa		4.19	□□□□□ -1.74
SSL1	YLR005W	MEX67	Q99257	599 aa	Known RBP	4.19	□□□□□ -1.74
SSL1	YLR005W	FOB1	O13329	566 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	YEL076C-A	P0CX16	216 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	YLR464W	P0CX17	216 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	YKL107W	P34251	309 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	KDX1	P36005	433 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	MNN4	P36044	1178 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	YBR284W	P38150	797 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	SHE3	P38272	425 aa	Known RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	YEL076C	P39971	216 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	ULP2	P40537	1034 aa	Predicted RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	THI6	P41835	540 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	VPS25	P47142	202 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	ASN1	P49089	572 aa	Known RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	CUE3	P53137	624 aa	Known RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	ARK1	P53974	638 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	SLG1	P54867	378 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	YML053C	Q04978	212 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	JIP5	Q06214	492 aa	Predicted RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	SHS1	Q07657	551 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	LEA1	Q08963	238 aa	Predicted RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	SGT2	Q12118	346 aa	Known RBP	4.18	□□□□□ -1.74
SSL1	YLR005W	DCS2	Q12123	353 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	MPD2	Q99316	277 aa		4.18	□□□□□ -1.74
SSL1	YLR005W	RPS14A	P06367	137 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	ENA1	P13587	1091 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	MTF1	P14908	341 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	MCM3	P24279	971 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	PRR1	P28708	518 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	ABD1	P32783	436 aa	Predicted RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	CSE1	P33307	960 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	YKL151C	P36059	337 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	DUG2	P38149	878 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	ERC1	P38767	581 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	SFB3	P38810	929 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	GGA2	P38817	585 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	RPS14B	P39516	138 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	NPP2	P39997	493 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	BTT1	P40314	149 aa	Predicted RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	IES1	P43579	692 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	CCM1	P48237	864 aa	Predicted RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	PIL1	P53252	339 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	ENA2	Q01896	1091 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	YHM2	Q04013	314 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	SPO20	Q04359	397 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	ADY4	Q05955	493 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	FMP25	Q08023	583 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	CDC53	Q12018	815 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	PDH1	Q12428	516 aa	Known RBP	4.17	□□□□□ -1.74
SSL1	YLR005W	ENA5	Q12691	1091 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	CTF3	Q12748	733 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	MSB2	P32334	1306 aa		4.17	□□□□□ -1.74
SSL1	YLR005W	CET1	O13297	549 aa	Predicted RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	HIS4	P00815	799 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	CUP1-1	P0CX80	61 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	CUP1-2	P0CX81	61 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	RPL19A	P0CX82	189 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	RPL19B	P0CX83	189 aa	Predicted RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	RPL4A	P10664	362 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	PHO8	P11491	566 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	NAT1	P12945	854 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	ECM32	P32644	1121 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	PEX2	P32800	271 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	ZRG8	P40021	1076 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	RPL4B	P49626	362 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	CTF18	P49956	741 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	ORC5	P50874	479 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	UBA2	P52488	636 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	YGR053C	P53234	283 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	TOF1	P53840	1238 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	IMP4	P53941	290 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	EIS1	Q05050	843 aa	Known RBP	4.16	□□□□□ -1.74
SSL1	YLR005W	HRQ1	Q05549	1077 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	YLR224W	Q05947	369 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	TPO1	Q07824	586 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	HMI1	Q12039	706 aa		4.16	□□□□□ -1.74
SSL1	YLR005W	TPK1	P06244	397 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	ASP3-2	P0CX77	362 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	ASP3-3	P0CX78	362 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	ASP3-4	P0CX79	362 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	ASP3-1	P0CZ17	362 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	ISY1	P21374	235 aa	Predicted RBP	4.15	□□□□□ -1.74
SSL1	YLR005W	YKL023W	P36103	277 aa	Known RBP	4.15	□□□□□ -1.74
SSL1	YLR005W	PET10	P36139	283 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	MND2	P40577	368 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	POL31	P46957	487 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	ZAP1	P47043	880 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	STB4	P50104	949 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	MNN10	P50108	393 aa	Known RBP	4.15	□□□□□ -1.74
SSL1	YLR005W	PHO23	P50947	330 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	UTP8	P53276	713 aa	Known RBP	4.15	□□□□□ -1.74
SSL1	YLR005W	CWC24	P53769	259 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	TMN2	Q04562	672 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	FLC1	Q08967	793 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	YPL150W	Q12152	901 aa		4.15	□□□□□ -1.74
SSL1	YLR005W	SPO11	P23179	398 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms