RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W VAM6Q07468 1049 aa4.82□□□□□ -1.64
ABF1YKL112W ATG29Q12092 213 aa4.82□□□□□ -1.64
ABF1YKL112W RIF1P29539 1916 aa4.82□□□□□ -1.64
ABF1YKL112W PRP16P15938 1071 aaPredicted RBP4.81□□□□□ -1.64
ABF1YKL112W RPI1P23250 407 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W CDC10P25342 322 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W SMI1P32566 505 aa4.81□□□□□ -1.64
ABF1YKL112W MDL1P33310 695 aa4.81□□□□□ -1.64
ABF1YKL112W YKL063CP35725 167 aa4.81□□□□□ -1.64
ABF1YKL112W EAP1P36041 632 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W PCH2P38126 564 aa4.81□□□□□ -1.64
ABF1YKL112W KAP104P38217 918 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W CIN4P39110 191 aa4.81□□□□□ -1.64
ABF1YKL112W BOL3P39724 118 aa4.81□□□□□ -1.64
ABF1YKL112W YER137CP40083 148 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W YGL140CP53120 1219 aa4.81□□□□□ -1.64
ABF1YKL112W COP1P53622 1201 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W SAM50P53969 484 aa4.81□□□□□ -1.64
ABF1YKL112W PRO2P54885 456 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W PDR8Q06149 701 aa4.81□□□□□ -1.64
ABF1YKL112W SAM3Q08986 587 aa4.81□□□□□ -1.64
ABF1YKL112W POL3P15436 1097 aa4.81□□□□□ -1.64
ABF1YKL112W PDX1P16451 410 aa4.81□□□□□ -1.64
ABF1YKL112W FUS3P16892 353 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W MSB1P21339 1137 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W CLB3P24870 427 aa4.81□□□□□ -1.64
ABF1YKL112W RRP43P25359 394 aaPredicted RBP4.81□□□□□ -1.64
ABF1YKL112W CDC15P27636 974 aa4.81□□□□□ -1.64
ABF1YKL112W DBF4P32325 704 aa4.81□□□□□ -1.64
ABF1YKL112W MEI5P32489 222 aa4.81□□□□□ -1.64
ABF1YKL112W RPT3P33298 428 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W LOT5P34234 306 aa4.81□□□□□ -1.64
ABF1YKL112W MTH1P35198 433 aa4.81□□□□□ -1.64
ABF1YKL112W SDS22P36047 338 aa4.81□□□□□ -1.64
ABF1YKL112W KHA1P40309 873 aa4.81□□□□□ -1.64
ABF1YKL112W YRB2P40517 327 aa4.81□□□□□ -1.64
ABF1YKL112W IRC6P43615 237 aa4.81□□□□□ -1.64
ABF1YKL112W VMA10P48836 114 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W TAF4P50105 388 aa4.81□□□□□ -1.64
ABF1YKL112W ASE1P50275 885 aa4.81□□□□□ -1.64
ABF1YKL112W BSC5P53755 489 aa4.81□□□□□ -1.64
ABF1YKL112W TFB2Q02939 513 aa4.81□□□□□ -1.64
ABF1YKL112W PEX25Q02969 394 aa4.81□□□□□ -1.64
ABF1YKL112W SPC24Q04477 213 aa4.81□□□□□ -1.64
ABF1YKL112W RBS1Q05672 457 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W TDA5Q06417 326 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W TAH18Q12181 623 aa4.81□□□□□ -1.64
ABF1YKL112W MDY2Q12285 212 aa4.81□□□□□ -1.64
ABF1YKL112W FRE6Q12473 712 aa4.81□□□□□ -1.64
ABF1YKL112W PAR32Q12515 295 aaKnown RBP4.81□□□□□ -1.64
ABF1YKL112W LAG2Q92325 660 aa4.81□□□□□ -1.64
ABF1YKL112W RAP1P11938 827 aa4.8□□□□□ -1.64
ABF1YKL112W PRP9P19736 530 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W SEC14P24280 304 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W GRR1P24814 1151 aa4.8□□□□□ -1.64
ABF1YKL112W CMK1P27466 446 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W NPL6P32832 435 aa4.8□□□□□ -1.64
ABF1YKL112W UTP11P34247 250 aaPredicted RBP4.8□□□□□ -1.64
ABF1YKL112W IFA38P38286 347 aa4.8□□□□□ -1.64
ABF1YKL112W YMR262WP38430 313 aa4.8□□□□□ -1.64
ABF1YKL112W SIP3P38717 1229 aa4.8□□□□□ -1.64
ABF1YKL112W MTG2P38860 518 aa4.8□□□□□ -1.64
ABF1YKL112W LSM5P40089 93 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W KTR7P40504 517 aa4.8□□□□□ -1.64
ABF1YKL112W ULP2P40537 1034 aaPredicted RBP4.8□□□□□ -1.64
ABF1YKL112W MND2P40577 368 aa4.8□□□□□ -1.64
ABF1YKL112W ARF3P40994 183 aaRIP-Chip data4.8□□□□□ -1.64not detected
ABF1YKL112W ERR3P42222 437 aa4.8□□□□□ -1.64
ABF1YKL112W NOP9P47077 666 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W UME1Q03010 460 aa4.8□□□□□ -1.64
ABF1YKL112W GFD1Q04839 188 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W DUS4Q06063 367 aa4.8□□□□□ -1.64
ABF1YKL112W VPS36Q06696 566 aa4.8□□□□□ -1.64
ABF1YKL112W SNA4Q07549 140 aa4.8□□□□□ -1.64
ABF1YKL112W CMS1Q07897 291 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W THI73Q07904 523 aa4.8□□□□□ -1.64
ABF1YKL112W CDC19P00549 500 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W PHO4P07270 312 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W MET3P08536 511 aa4.8□□□□□ -1.64
ABF1YKL112W ALG1P16661 449 aa4.8□□□□□ -1.64
ABF1YKL112W CAD1P24813 409 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W RRP7P25368 297 aaPredicted RBP4.8□□□□□ -1.64
ABF1YKL112W RPT5P33297 434 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W NIC96P34077 839 aa4.8□□□□□ -1.64
ABF1YKL112W MUD2P36084 527 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W LAS1P36146 502 aaPredicted RBP4.8□□□□□ -1.64
ABF1YKL112W APM3P38153 483 aa4.8□□□□□ -1.64
ABF1YKL112W YHL012WP38709 493 aa4.8□□□□□ -1.64
ABF1YKL112W RPS26AP39938 119 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W RPS26BP39939 119 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W RIO2P40160 425 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W LSG1P53145 640 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W LCL3P53153 274 aa4.8□□□□□ -1.64
ABF1YKL112W TYW3P53177 273 aa4.8□□□□□ -1.64
ABF1YKL112W YGR122WP53272 402 aa4.8□□□□□ -1.64
ABF1YKL112W FYV6P53913 173 aa4.8□□□□□ -1.64
ABF1YKL112W MRPS17Q03246 237 aaPredicted RBP4.8□□□□□ -1.64
ABF1YKL112W STE20Q03497 939 aaKnown RBP4.8□□□□□ -1.64
ABF1YKL112W UTP21Q06078 939 aaPredicted RBP4.8□□□□□ -1.64
ABF1YKL112W EAF1Q06337 982 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms