RNA–Protein interactions for RNA: YKL050C

YKL050C, Transcript of Protein of unknown function, yeast

Gene YKL050C, Length 2,769 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL050C	YKL050C	RPS21B	Q3E754	87 aa	Known RBP	3.9	□□□□□ -1.78
YKL050C	YKL050C	FIG2	P25653	1609 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	NUM1	Q00402	2748 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	SEC53	P07283	254 aa	Known RBP	3.9	□□□□□ -1.79
YKL050C	YKL050C	CLB4	P24871	460 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	OCA4	P25366	362 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	PER1	P25625	357 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	EFB1	P32471	206 aa	Known RBP	3.9	□□□□□ -1.79
YKL050C	YKL050C	TEF4	P36008	412 aa	Known RBP	3.9	□□□□□ -1.79
YKL050C	YKL050C	IFA38	P38286	347 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	EXO5	P38289	585 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	ARB1	P40024	610 aa	Known RBP	3.9	□□□□□ -1.79
YKL050C	YKL050C	SPO22	P40511	975 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	PRM2	P40534	656 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	THI6	P41835	540 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	JJJ2	P46997	583 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	CCM1	P48237	864 aa	Predicted RBP	3.9	□□□□□ -1.79
YKL050C	YKL050C	HFM1	P51979	1187 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	SNF12	P53628	566 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	HUA2	Q12134	243 aa		3.9	□□□□□ -1.79
YKL050C	YKL050C	TPK1	P06244	397 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	PWP1	P21304	576 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	SEC65	P29478	273 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	YEL043W	P32618	956 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	MRT4	P33201	236 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	TGL1	P34163	548 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	GCS1	P35197	352 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	ADD66	P36040	267 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	RGD1	P38339	666 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	DED81	P38707	554 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	OSW5	P40219	148 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	YIL165C	P40446	119 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	LEM3	P42838	414 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	YJR039W	P47107	1121 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	BPL1	P48445	690 aa	Predicted RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	ALT1	P52893	592 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	HOP2	P53187	214 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	LSB1	P53281	241 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	YGR266W	P53326	701 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	LSC1	P53598	329 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	YAP6	Q03935	383 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	YDR344C	Q05510	147 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	MCH5	Q08777	521 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	CWC2	Q12046	339 aa	Predicted RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	CDC19	P00549	500 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	PUT4	P15380	627 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	ATP12	P22135	325 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	PRE8	P23639	250 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	MIH1	P23748	554 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	MSP1	P28737	362 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	MRP4	P32902	394 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	SUR1	P33300	382 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	PCH2	P38126	564 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	UBP9	P39967	754 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	NEO1	P40527	1151 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	NAS2	P40555	220 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	VTC4	P47075	721 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	DUO1	P53168	247 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	GIM3	P53900	129 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	DAK1	P54838	584 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	YML082W	Q04533	649 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	SPH1	Q06160	661 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	MDM36	Q06820	579 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	FAS2	P19097	1887 aa	Known RBP	3.89	□□□□□ -1.79
YKL050C	YKL050C	RTC1	Q08281	1341 aa		3.89	□□□□□ -1.79
YKL050C	YKL050C	YML002W	P0CF17	737 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	YUH1	P35127	236 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	STB6	P36085	766 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	FAT1	P38225	669 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	SHC1	P39000	512 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	SWD1	P39706	426 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	SCS2	P40075	244 aa	Known RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	SSU1	P41930	458 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	UBC9	P50623	157 aa	Predicted RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	TEL2	P53038	688 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	VBA4	Q04602	768 aa	Known RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	SMD2	Q06217	110 aa	Known RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	YLR358C	O13565	187 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	ADH4	P10127	382 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
YKL050C	YKL050C	BET2	P20133	325 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	CLB1	P24868	471 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	SPC110	P32380	944 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
YKL050C	YKL050C	MRE11	P32829	692 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	DAD2	P36162	133 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	POL12	P38121	705 aa	Predicted RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	YFL052W	P43551	465 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	YNL247W	P53852	767 aa	Known RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	PRO2	P54885	456 aa	Known RBP	3.88	□□□□□ -1.79
YKL050C	YKL050C	ENV7	Q12003	364 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	NBP2	Q12163	236 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	PSY3	Q12318	242 aa		3.88	□□□□□ -1.79
YKL050C	YKL050C	NOT3	P06102	836 aa	Known RBP	3.87	□□□□□ -1.79
YKL050C	YKL050C	DBP3	P20447	523 aa	Known RBP	3.87	□□□□□ -1.79
YKL050C	YKL050C	PHO84	P25297	587 aa	Known RBP	3.87	□□□□□ -1.79
YKL050C	YKL050C	AFR1	P33304	620 aa		3.87	□□□□□ -1.79
YKL050C	YKL050C	SRP68	P38687	599 aa	Known RBP	3.87	□□□□□ -1.79
YKL050C	YKL050C	YMR124W	P39523	943 aa	Known RBP	3.87	□□□□□ -1.79
YKL050C	YKL050C	EAF5	P39995	279 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms