RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A STP1Q00947 519 aa3.9□□□□□ -1.79
SFT1YKL006C-A MTD1Q02046 320 aaKnown RBP3.9□□□□□ -1.79
SFT1YKL006C-A RGT2Q12300 763 aa3.9□□□□□ -1.79
SFT1YKL006C-A FRE7Q12333 620 aa3.9□□□□□ -1.79
SFT1YKL006C-A BI2P03873 423 aa3.89□□□□□ -1.79
SFT1YKL006C-A ARG1P22768 420 aa3.89□□□□□ -1.79
SFT1YKL006C-A URE2P23202 354 aaKnown RBP3.89□□□□□ -1.79
SFT1YKL006C-A HEM12P32347 362 aaPredicted RBP3.89□□□□□ -1.79
SFT1YKL006C-A MTG2P38860 518 aa3.89□□□□□ -1.79
SFT1YKL006C-A STL1P39932 569 aa3.89□□□□□ -1.79
SFT1YKL006C-A NMD5P46970 1048 aa3.89□□□□□ -1.79
SFT1YKL006C-A YJR120WP47157 116 aa3.89□□□□□ -1.79
SFT1YKL006C-A ERG13P54839 491 aaKnown RBP3.89□□□□□ -1.79
SFT1YKL006C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SFT1YKL006C-A PET309P32522 965 aaPredicted RBP3.88□□□□□ -1.79
SFT1YKL006C-A SNO3P43544 222 aa3.88□□□□□ -1.79
SFT1YKL006C-A PEX15Q08215 383 aa3.88□□□□□ -1.79
SFT1YKL006C-A CRT10Q08226 957 aa3.88□□□□□ -1.79
SFT1YKL006C-A PRS5Q12265 496 aaKnown RBP3.88□□□□□ -1.79
SFT1YKL006C-A RDL1Q12305 139 aaKnown RBP3.88□□□□□ -1.79
SFT1YKL006C-A URA3P03962 267 aa3.87□□□□□ -1.79
SFT1YKL006C-A CBP3P21560 335 aa3.87□□□□□ -1.79
SFT1YKL006C-A CDC5P32562 705 aa3.87□□□□□ -1.79
SFT1YKL006C-A TFC4P33339 1025 aa3.87□□□□□ -1.79
SFT1YKL006C-A STB5P38699 743 aa3.87□□□□□ -1.79
SFT1YKL006C-A TDA10P42938 290 aa3.87□□□□□ -1.79
SFT1YKL006C-A COS12P53053 380 aa3.87□□□□□ -1.79
SFT1YKL006C-A YPL071CQ02864 156 aa3.87□□□□□ -1.79
SFT1YKL006C-A PCL8Q08966 492 aa3.87□□□□□ -1.79
SFT1YKL006C-A SDH8P38345 138 aa3.86□□□□□ -1.79
SFT1YKL006C-A LNP1P38878 278 aa3.86□□□□□ -1.79
SFT1YKL006C-A SSP120P39931 234 aaKnown RBP3.86□□□□□ -1.79
SFT1YKL006C-A IDS2P46958 469 aa3.86□□□□□ -1.79
SFT1YKL006C-A BPL1P48445 690 aaPredicted RBP3.86□□□□□ -1.79
SFT1YKL006C-A YNR071CP53757 342 aa3.86□□□□□ -1.79
SFT1YKL006C-A COG6P53959 839 aa3.86□□□□□ -1.79
SFT1YKL006C-A TPO3Q06451 622 aa3.86□□□□□ -1.79
SFT1YKL006C-A BSP1Q06604 576 aa3.86□□□□□ -1.79
SFT1YKL006C-A RTK1Q12100 620 aaPredicted RBP3.86□□□□□ -1.79
SFT1YKL006C-A GSY2P27472 705 aa3.85□□□□□ -1.79
SFT1YKL006C-A LAS21P40367 830 aa3.85□□□□□ -1.79
SFT1YKL006C-A MAD2P40958 196 aa3.85□□□□□ -1.79
SFT1YKL006C-A BST1P43571 1029 aa3.85□□□□□ -1.79
SFT1YKL006C-A SAE2P46946 345 aa3.85□□□□□ -1.79
SFT1YKL006C-A PEX14P53112 341 aa3.85□□□□□ -1.79
SFT1YKL006C-A YNL058CP53947 316 aa3.85□□□□□ -1.79
SFT1YKL006C-A MPS1P54199 764 aa3.85□□□□□ -1.79
SFT1YKL006C-A RSC9Q03124 581 aa3.85□□□□□ -1.79
SFT1YKL006C-A DIN7Q12086 430 aa3.85□□□□□ -1.79
SFT1YKL006C-A GDA1P32621 518 aa3.84□□□□□ -1.79
SFT1YKL006C-A RRP8P38961 392 aaKnown RBP3.84□□□□□ -1.79
SFT1YKL006C-A GSM1P42950 618 aa3.84□□□□□ -1.79
SFT1YKL006C-A COG2P53271 262 aa3.84□□□□□ -1.79
SFT1YKL006C-A IDP3P53982 420 aaKnown RBP3.84□□□□□ -1.79
SFT1YKL006C-A PHM6Q05637 104 aa3.84□□□□□ -1.79
SFT1YKL006C-A HRD3Q05787 833 aa3.84□□□□□ -1.79
SFT1YKL006C-A CTT1P06115 562 aa3.83□□□□□ -1.8
SFT1YKL006C-A YJU2P28320 278 aaPredicted RBP3.83□□□□□ -1.8
SFT1YKL006C-A PLC1P32383 869 aa3.83□□□□□ -1.8
SFT1YKL006C-A JHD1P40034 492 aa3.83□□□□□ -1.8
SFT1YKL006C-A FOL1P53848 824 aa3.83□□□□□ -1.8
SFT1YKL006C-A AAT1Q01802 451 aa3.83□□□□□ -1.8
SFT1YKL006C-A UBP16Q02863 499 aa3.83□□□□□ -1.8
SFT1YKL006C-A RAD33Q04231 177 aa3.83□□□□□ -1.8
SFT1YKL006C-A CYK3Q07533 885 aa3.83□□□□□ -1.8
SFT1YKL006C-A YOR389WQ08912 624 aa3.83□□□□□ -1.8
SFT1YKL006C-A PSF3Q12146 194 aa3.83□□□□□ -1.8
SFT1YKL006C-A TAF5P38129 798 aa3.82□□□□□ -1.8
SFT1YKL006C-A MAM1P40065 302 aa3.82□□□□□ -1.8
SFT1YKL006C-A VFA1P40080 203 aa3.82□□□□□ -1.8
SFT1YKL006C-A IRC7P43623 340 aa3.82□□□□□ -1.8
SFT1YKL006C-A ENT2Q05785 613 aa3.82□□□□□ -1.8
SFT1YKL006C-A SPN1Q06505 410 aaPredicted RBP3.82□□□□□ -1.8
SFT1YKL006C-A NUR1Q12066 484 aa3.82□□□□□ -1.8
SFT1YKL006C-A SLX4Q12098 748 aa3.82□□□□□ -1.8
SFT1YKL006C-A DBP10Q12389 995 aaKnown RBP3.82□□□□□ -1.8
SFT1YKL006C-A YLR111WQ12528 110 aa3.82□□□□□ -1.8
SFT1YKL006C-A PNO1Q99216 274 aaKnown RBP3.82□□□□□ -1.8
SFT1YKL006C-A YMR085WP0CF18 432 aa3.81□□□□□ -1.8
SFT1YKL006C-A PHO3P24031 467 aa3.81□□□□□ -1.8
SFT1YKL006C-A TGL1P34163 548 aa3.81□□□□□ -1.8
SFT1YKL006C-A SDS22P36047 338 aa3.81□□□□□ -1.8
SFT1YKL006C-A ENP1P38333 483 aaKnown RBP3.81□□□□□ -1.8
SFT1YKL006C-A SAW1P39735 261 aa3.81□□□□□ -1.8
SFT1YKL006C-A SCS2P40075 244 aaKnown RBP3.81□□□□□ -1.8
SFT1YKL006C-A YNL092WP53934 400 aa3.81□□□□□ -1.8
SFT1YKL006C-A YML119WQ03208 357 aa3.81□□□□□ -1.8
SFT1YKL006C-A TRI1Q05024 226 aa3.81□□□□□ -1.8
SFT1YKL006C-A GEP3Q08622 556 aa3.81□□□□□ -1.8
SFT1YKL006C-A VAS1P07806 1104 aaKnown RBP3.8□□□□□ -1.8
SFT1YKL006C-A YAP1P19880 650 aaKnown RBP3.8□□□□□ -1.8
SFT1YKL006C-A PRE2P30656 287 aaKnown RBP3.8□□□□□ -1.8
SFT1YKL006C-A MNT3P40549 630 aa3.8□□□□□ -1.8
SFT1YKL006C-A CIR1P42940 261 aa3.8□□□□□ -1.8
SFT1YKL006C-A ACS1Q01574 713 aa3.8□□□□□ -1.8
SFT1YKL006C-A YML053CQ04978 212 aa3.8□□□□□ -1.8
SFT1YKL006C-A CRC1Q12289 327 aa3.8□□□□□ -1.8
SFT1YKL006C-A YER175W-AQ8TGU4 54 aa3.8□□□□□ -1.8
SFT1YKL006C-A CHO2P05374 869 aaKnown RBP3.79□□□□□ -1.8
SFT1YKL006C-A AMD2P22580 549 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms