RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM2	YIL138C	UBP12	P39538	1254 aa		3.23	□□□□□ -1.89
TPM2	YIL138C	YJR096W	P47137	282 aa		3.23	□□□□□ -1.89
TPM2	YIL138C	YGR153W	P48238	217 aa		3.23	□□□□□ -1.89
TPM2	YIL138C	YDL183C	P48569	320 aa		3.23	□□□□□ -1.89
TPM2	YIL138C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.23	□□□□□ -1.89	RIP-Chip
TPM2	YIL138C	CRT10	Q08226	957 aa		3.23	□□□□□ -1.89
TPM2	YIL138C	FAP7	Q12055	197 aa	Predicted RBP	3.23	□□□□□ -1.89
TPM2	YIL138C	RPS21B	Q3E754	87 aa	Known RBP	3.23	□□□□□ -1.89
TPM2	YIL138C	APM4	Q99186	491 aa		3.23	□□□□□ -1.89
TPM2	YIL138C	CET1	O13297	549 aa	Predicted RBP	3.22	□□□□□ -1.89
TPM2	YIL138C	YCP4	P25349	247 aa	Known RBP	3.22	□□□□□ -1.89
TPM2	YIL138C	GRX4	P32642	244 aa		3.22	□□□□□ -1.89
TPM2	YIL138C	OAF3	P36023	863 aa		3.22	□□□□□ -1.89
TPM2	YIL138C	HXT6	P39003	570 aa	Known RBP	3.22	□□□□□ -1.89
TPM2	YIL138C	HXT7	P39004	570 aa		3.22	□□□□□ -1.89
TPM2	YIL138C	MTQ2	Q03920	221 aa	Predicted RBP	3.22	□□□□□ -1.89
TPM2	YIL138C	HFI1	Q12060	488 aa		3.22	□□□□□ -1.89
TPM2	YIL138C	YEL076C-A	P0CX16	216 aa		3.21	□□□□□ -1.9
TPM2	YIL138C	YLR464W	P0CX17	216 aa		3.21	□□□□□ -1.9
TPM2	YIL138C	AIM17	P23180	465 aa	Known RBP	3.21	□□□□□ -1.9
TPM2	YIL138C	COQ3	P27680	312 aa		3.21	□□□□□ -1.9
TPM2	YIL138C	YEL076C	P39971	216 aa		3.21	□□□□□ -1.9
TPM2	YIL138C	RPL15B	P54780	204 aa	Predicted RBP	3.21	□□□□□ -1.9
TPM2	YIL138C	MTD1	Q02046	320 aa	Known RBP	3.21	□□□□□ -1.9
TPM2	YIL138C	CYK3	Q07533	885 aa		3.21	□□□□□ -1.9
TPM2	YIL138C	SNA4	Q07549	140 aa		3.21	□□□□□ -1.9
TPM2	YIL138C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TPM2	YIL138C	YPT1	P01123	206 aa	Known RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	SSB1	P11484	613 aa	Known RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	YPK1	P12688	680 aa	Known RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	FLO5	P38894	1075 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	SSB2	P40150	613 aa	Known RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	VID28	P40547	921 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	GZF3	P42944	551 aa	Known RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	MDV1	P47025	714 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	LYS20	P48570	428 aa	Known RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	GPG1	P53130	126 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	PTA1	Q01329	785 aa	Predicted RBP	3.2	□□□□□ -1.9
TPM2	YIL138C	ECM9	Q02202	377 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	YHM2	Q04013	314 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	NDD1	Q08887	554 aa		3.2	□□□□□ -1.9
TPM2	YIL138C	CDC26	P14724	124 aa		3.19	□□□□□ -1.9
TPM2	YIL138C	BET2	P20133	325 aa		3.19	□□□□□ -1.9
TPM2	YIL138C	DSS4	P32601	143 aa		3.19	□□□□□ -1.9
TPM2	YIL138C	MTG2	P38860	518 aa		3.19	□□□□□ -1.9
TPM2	YIL138C	CIR1	P42940	261 aa		3.19	□□□□□ -1.9
TPM2	YIL138C	BOP3	P53958	396 aa		3.19	□□□□□ -1.9
TPM2	YIL138C	YTM1	Q12024	460 aa	Predicted RBP	3.19	□□□□□ -1.9
TPM2	YIL138C	PNO1	Q99216	274 aa	Known RBP	3.19	□□□□□ -1.9
TPM2	YIL138C	SEC12	P11655	471 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	DGR2	P32330	852 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	CDC5	P32562	705 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	DID4	P36108	232 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	RRP8	P38961	392 aa	Known RBP	3.18	□□□□□ -1.9
TPM2	YIL138C	RAD26	P40352	1085 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	YIR016W	P40572	265 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	GPP1	P41277	250 aa	Known RBP	3.18	□□□□□ -1.9
TPM2	YIL138C	SQS1	P53866	767 aa	Known RBP	3.18	□□□□□ -1.9
TPM2	YIL138C	VTC3	Q02725	835 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	UBX3	Q12229	455 aa		3.18	□□□□□ -1.9
TPM2	YIL138C	CBP3	P21560	335 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	AEP2	P22136	580 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	MAK32	P23060	363 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	RPT3	P33298	428 aa	Known RBP	3.17	□□□□□ -1.9
TPM2	YIL138C	FAT1	P38225	669 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	FTH1	P38310	465 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	TOM71	P38825	639 aa	Known RBP	3.17	□□□□□ -1.9
TPM2	YIL138C	SNU56	Q03782	492 aa	Known RBP	3.17	□□□□□ -1.9
TPM2	YIL138C	GRS2	Q06817	618 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	TRE2	Q08693	809 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	ATX2	Q12067	313 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	TMA17	Q12513	150 aa		3.17	□□□□□ -1.9
TPM2	YIL138C	ILS1	P09436	1072 aa	Known RBP	3.16	□□□□□ -1.9
TPM2	YIL138C	PCK1	P10963	549 aa		3.16	□□□□□ -1.9
TPM2	YIL138C	RMA1	P36001	430 aa	Known RBP	3.16	□□□□□ -1.9
TPM2	YIL138C	LAS21	P40367	830 aa		3.16	□□□□□ -1.9
TPM2	YIL138C	MNN11	P46985	422 aa	Known RBP	3.16	□□□□□ -1.9
TPM2	YIL138C	PEF1	P53238	335 aa		3.16	□□□□□ -1.9
TPM2	YIL138C	AAT1	Q01802	451 aa		3.16	□□□□□ -1.9
TPM2	YIL138C	RAD33	Q04231	177 aa		3.16	□□□□□ -1.9
TPM2	YIL138C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
TPM2	YIL138C	NOP1	P15646	327 aa	Known RBP	3.15	□□□□□ -1.91
TPM2	YIL138C	TOM20	P35180	183 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	SDH8	P38345	138 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	YIL152W	P40455	235 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	FOL1	P53848	824 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	YNL092W	P53934	400 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	SCW10	Q04951	389 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	YTH1	Q06102	208 aa	Predicted RBP	3.15	□□□□□ -1.91
TPM2	YIL138C	DSE3	Q08729	430 aa		3.15	□□□□□ -1.91
TPM2	YIL138C	MRC1	P25588	1096 aa		3.14	□□□□□ -1.91
TPM2	YIL138C	GDA1	P32621	518 aa		3.14	□□□□□ -1.91
TPM2	YIL138C	IMD2	P38697	523 aa	Known RBP	3.14	□□□□□ -1.91
TPM2	YIL138C	RTT107	P38850	1070 aa		3.14	□□□□□ -1.91
TPM2	YIL138C	CIN1	P40987	1014 aa		3.14	□□□□□ -1.91
TPM2	YIL138C	NOP2	P40991	618 aa	Known RBP	3.14	□□□□□ -1.91
TPM2	YIL138C	YJR120W	P47157	116 aa		3.14	□□□□□ -1.91
TPM2	YIL138C	IMD3	P50095	523 aa	Known RBP	3.14	□□□□□ -1.91
TPM2	YIL138C	COG2	P53271	262 aa		3.14	□□□□□ -1.91
TPM2	YIL138C	GET3	Q12154	354 aa	Known RBP	3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms