RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C SAN1P22470 610 aa5.82□□□□□ -1.48
SFB3YHR098C CAP1P28495 268 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C PRR1P28708 518 aa5.82□□□□□ -1.48
SFB3YHR098C MKK2P32491 506 aa5.82□□□□□ -1.48
SFB3YHR098C NTR2P36118 322 aaPredicted RBP5.82□□□□□ -1.48
SFB3YHR098C TRZ1P36159 838 aaPredicted RBP5.82□□□□□ -1.48
SFB3YHR098C KAP104P38217 918 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C APD1P38281 316 aa5.82□□□□□ -1.48
SFB3YHR098C SPC97P38863 823 aa5.82□□□□□ -1.48
SFB3YHR098C TGL3P40308 642 aa5.82□□□□□ -1.48
SFB3YHR098C THI6P41835 540 aa5.82□□□□□ -1.48
SFB3YHR098C TYW3P53177 273 aa5.82□□□□□ -1.48
SFB3YHR098C RPS15Q01855 142 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C GLO2Q05584 274 aa5.82□□□□□ -1.48
SFB3YHR098C YOR238WQ08634 303 aa5.82□□□□□ -1.48
SFB3YHR098C MF(ALPHA)1P01149 165 aa5.82□□□□□ -1.48
SFB3YHR098C LEU1P07264 779 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C ANP1P32629 500 aa5.82□□□□□ -1.48
SFB3YHR098C MNN2P38069 597 aa5.82□□□□□ -1.48
SFB3YHR098C SAH1P39954 449 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C RPH1P39956 796 aa5.82□□□□□ -1.48
SFB3YHR098C PRK1P40494 810 aa5.82□□□□□ -1.48
SFB3YHR098C MET12P46151 657 aa5.82□□□□□ -1.48
SFB3YHR098C SNX4P47057 423 aa5.82□□□□□ -1.48
SFB3YHR098C MDE1P47095 244 aa5.82□□□□□ -1.48
SFB3YHR098C LIA1P47120 325 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C SYH1Q02875 849 aaKnown RBP5.82□□□□□ -1.48
SFB3YHR098C YDL073WQ07454 984 aa5.82□□□□□ -1.48
SFB3YHR098C VHS3Q08438 674 aa5.82□□□□□ -1.48
SFB3YHR098C MCH5Q08777 521 aa5.82□□□□□ -1.48
SFB3YHR098C FLC1Q08967 793 aa5.82□□□□□ -1.48
SFB3YHR098C YLR053CQ12026 108 aa5.82□□□□□ -1.48
SFB3YHR098C AI5_ALPHAQ9ZZX1 630 aa5.82□□□□□ -1.48
SFB3YHR098C FOB1O13329 566 aa5.81□□□□□ -1.48
SFB3YHR098C NMT1P14743 455 aa5.81□□□□□ -1.48
SFB3YHR098C SEN2P16658 377 aa5.81□□□□□ -1.48
SFB3YHR098C NPR1P22211 790 aa5.81□□□□□ -1.48
SFB3YHR098C CLB3P24870 427 aa5.81□□□□□ -1.48
SFB3YHR098C TPS2P31688 896 aaKnown RBP5.81□□□□□ -1.48
SFB3YHR098C ASE1P50275 885 aa5.81□□□□□ -1.48
SFB3YHR098C CWC25P53854 179 aaKnown RBP5.81□□□□□ -1.48
SFB3YHR098C TAF12Q03761 539 aa5.81□□□□□ -1.48
SFB3YHR098C COQ9Q05779 260 aa5.81□□□□□ -1.48
SFB3YHR098C SSQ1Q05931 657 aaPredicted RBP5.81□□□□□ -1.48
SFB3YHR098C ERF2Q06551 359 aa5.81□□□□□ -1.48
SFB3YHR098C IRC3Q06683 689 aa5.81□□□□□ -1.48
SFB3YHR098C SYO1Q07395 620 aa5.81□□□□□ -1.48
SFB3YHR098C FUS1P11710 512 aa5.81□□□□□ -1.48
SFB3YHR098C IFA38P38286 347 aa5.81□□□□□ -1.48
SFB3YHR098C HXT6P39003 570 aaKnown RBP5.81□□□□□ -1.48
SFB3YHR098C HXT7P39004 570 aa5.81□□□□□ -1.48
SFB3YHR098C IRC5P43610 853 aa5.81□□□□□ -1.48
SFB3YHR098C TRF5P48561 642 aaKnown RBP5.81□□□□□ -1.48
SFB3YHR098C NMA2P53204 395 aa5.81□□□□□ -1.48
SFB3YHR098C RPL22BP56628 122 aaKnown RBP5.81□□□□□ -1.48
SFB3YHR098C SLM3Q12093 417 aa5.81□□□□□ -1.48
SFB3YHR098C ATP16Q12165 160 aa5.81□□□□□ -1.48
SFB3YHR098C RRD2Q12461 358 aa5.81□□□□□ -1.48
SFB3YHR098C NOT5Q12514 560 aaPredicted RBP5.81□□□□□ -1.48
SFB3YHR098C ATP4P05626 244 aa5.8□□□□□ -1.48
SFB3YHR098C GPA2P10823 449 aa5.8□□□□□ -1.48
SFB3YHR098C MSD1P15179 658 aaKnown RBP5.8□□□□□ -1.48
SFB3YHR098C ISY1P21374 235 aaPredicted RBP5.8□□□□□ -1.48
SFB3YHR098C SLI15P38283 698 aa5.8□□□□□ -1.48
SFB3YHR098C SEO1P39709 593 aa5.8□□□□□ -1.48
SFB3YHR098C SSP120P39931 234 aaKnown RBP5.8□□□□□ -1.48
SFB3YHR098C RTA1P53047 317 aa5.8□□□□□ -1.48
SFB3YHR098C YTP1P53584 459 aa5.8□□□□□ -1.48
SFB3YHR098C YET2Q04210 160 aa5.8□□□□□ -1.48
SFB3YHR098C YMR027WQ04371 470 aa5.8□□□□□ -1.48
SFB3YHR098C RGC1Q06108 1083 aaKnown RBP5.8□□□□□ -1.48
SFB3YHR098C ADF1Q2V2Q1 113 aa5.8□□□□□ -1.48
SFB3YHR098C ATP2P00830 511 aaKnown RBP5.8□□□□□ -1.48
SFB3YHR098C RPL6BP05739 176 aaKnown RBP5.8□□□□□ -1.48
SFB3YHR098C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48 RIP-Chip
SFB3YHR098C CDC34P14682 295 aa5.8□□□□□ -1.48
SFB3YHR098C MAK31P23059 88 aa5.8□□□□□ -1.48
SFB3YHR098C CMK1P27466 446 aaKnown RBP5.8□□□□□ -1.48
SFB3YHR098C CLG1P35190 452 aa5.8□□□□□ -1.48
SFB3YHR098C CCL1P37366 393 aa5.8□□□□□ -1.48
SFB3YHR098C ETR1P38071 380 aa5.8□□□□□ -1.48
SFB3YHR098C UBP7P40453 1071 aa5.8□□□□□ -1.48
SFB3YHR098C RSM26P47141 266 aa5.8□□□□□ -1.48
SFB3YHR098C PAN2P53010 1115 aaPredicted RBP5.8□□□□□ -1.48
SFB3YHR098C YNL115CP53925 644 aa5.8□□□□□ -1.48
SFB3YHR098C AGE1Q04412 482 aa5.8□□□□□ -1.48
SFB3YHR098C YPR172WQ06608 200 aa5.8□□□□□ -1.48
SFB3YHR098C GYP1Q08484 637 aa5.8□□□□□ -1.48
SFB3YHR098C RCN2Q12044 265 aa5.8□□□□□ -1.48
SFB3YHR098C ATG11Q12527 1178 aa5.8□□□□□ -1.48
SFB3YHR098C YLR278CQ05854 1341 aa5.8□□□□□ -1.48
SFB3YHR098C CAN1P04817 590 aa5.79□□□□□ -1.48
SFB3YHR098C FUR4P05316 633 aaKnown RBP5.79□□□□□ -1.48
SFB3YHR098C CLN2P20438 545 aa5.79□□□□□ -1.48
SFB3YHR098C PTP2P29461 750 aa5.79□□□□□ -1.48
SFB3YHR098C MEI4P29467 408 aa5.79□□□□□ -1.48
SFB3YHR098C MYO3P36006 1272 aa5.79□□□□□ -1.48
SFB3YHR098C RRN3P36070 627 aa5.79□□□□□ -1.48
SFB3YHR098C SET3P36124 751 aa5.79□□□□□ -1.48
SFB3YHR098C YDR089WP38966 869 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 118.8 ms