RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	ADK2	P26364	225 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	PHO91	P27514	894 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	CDC15	P27636	974 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	SBA1	P28707	216 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	TPS2	P31688	896 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	ABD1	P32783	436 aa	Predicted RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	ELM1	P32801	640 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	RPT5	P33297	434 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	APD1	P38281	316 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	NTC20	P38302	140 aa	Predicted RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	KEL1	P38853	1164 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	AXL2	P38928	823 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	RGA1	P39083	1007 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	MRX1	P40050	688 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	YIR042C	P40586	236 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	SLD3	P53135	668 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	OGG1	P53397	376 aa	Predicted RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PFK1	YGR240C	EGD1	Q02642	157 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	AIM32	Q04689	311 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	YPR109W	Q06104	294 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	VAC14	Q06708	880 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	RPS3	P05750	240 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	SRD1	P09007	221 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	YCK2	P23292	546 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	CDC12	P32468	407 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	NUF2	P33895	451 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	BDF1	P35817	686 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	HSL7	P38274	827 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	AMN1	P38285	549 aa	Predicted RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	YBR197C	P38306	217 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	RGD1	P38339	666 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	RPN11	P43588	306 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	YDL183C	P48569	320 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	GCV2	P49095	1034 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	CBK1	P53894	756 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	CEG1	Q01159	459 aa	Predicted RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	YLR456W	Q06199	204 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	DSE3	Q08729	430 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	VIK1	Q12045	647 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	CMC2	Q3E7A4	109 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	COX11	P19516	300 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	OLE1	P21147	510 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	SGF29	P25554	259 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	NUP133	P36161	1157 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	ALG3	P38179	458 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	CCC2	P38995	1004 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	YGR273C	P53329	174 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	TEP1	P53916	434 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	ADE12	P80210	433 aa	Known RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	URC2	Q04411	772 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	BSC2	Q05611	235 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	PML1	Q07930	204 aa	Predicted RBP	4.56	□□□□□ -1.68
PFK1	YGR240C	TLG2	Q08144	397 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	HAL9	Q12180	1030 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	HER1	Q12276	1246 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	ARP7	Q12406	477 aa		4.56	□□□□□ -1.68
PFK1	YGR240C	RPS9A	O13516	197 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	ARG3	P05150	338 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	RPS9B	P05755	195 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	ARG80	P07249	177 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	MSB1	P21339	1137 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	ISC10	P32645	267 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	GCS1	P35197	352 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	TCD1	P38756	429 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	XDJ1	P39102	459 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	THI6	P41835	540 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	ARC35	P53731	342 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	ESBP6	P53918	673 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	SRC1	Q03707	834 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	PEX15	Q08215	383 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	TGL5	Q12043	749 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	LAG2	Q92325	660 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	GUK1	P15454	187 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	SFL1	P20134	766 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	KTR2	P33550	425 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	YEL1	P34225	687 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	YPT52	P36018	234 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	YHL017W	P38745	532 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	RTC3	P38804	111 aa	Predicted RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	UTP9	P38882	575 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	TAF4	P50105	388 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	KTR6	P54070	446 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	GCR2	Q01722	534 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	SMA1	Q02651	245 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	BCP1	Q06338	283 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	ABP140	Q08641	628 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	CHS5	Q12114	671 aa	Known RBP	4.55	□□□□□ -1.68
PFK1	YGR240C	PCD1	Q12524	340 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	SRN2	Q99176	213 aa		4.55	□□□□□ -1.68
PFK1	YGR240C	TPK1	P06244	397 aa		4.54	□□□□□ -1.68
PFK1	YGR240C	APE1	P14904	514 aa		4.54	□□□□□ -1.68
PFK1	YGR240C	TEC1	P18412	486 aa		4.54	□□□□□ -1.68
PFK1	YGR240C	YPK2	P18961	677 aa		4.54	□□□□□ -1.68
PFK1	YGR240C	RAD53	P22216	821 aa		4.54	□□□□□ -1.68
PFK1	YGR240C	URA7	P28274	579 aa	Known RBP	4.54	□□□□□ -1.68
PFK1	YGR240C	BMH1	P29311	267 aa	Known RBP	4.54	□□□□□ -1.68
PFK1	YGR240C	ZUO1	P32527	433 aa	Known RBP	4.54	□□□□□ -1.68
PFK1	YGR240C	SMC1	P32908	1225 aa		4.54	□□□□□ -1.68
PFK1	YGR240C	DAD2	P36162	133 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms