RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	KIN3	P22209	435 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	BEM3	P32873	1128 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	TAF5	P38129	798 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	BDH2	P39713	417 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	TRS130	Q03660	1102 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	UFO1	Q04511	668 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	TRI1	Q05024	226 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	BMS1	Q08965	1183 aa	Known RBP	4.61	□□□□□ -1.67
YFL040W	YFL040W	BNI1	P41832	1953 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	CDC43	P18898	376 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	MPE1	P35728	441 aa	Known RBP	4.61	□□□□□ -1.67
YFL040W	YFL040W	DHR2	P36009	735 aa	Predicted RBP	4.61	□□□□□ -1.67
YFL040W	YFL040W	MRPL7	P36519	292 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	YJL193W	P39542	402 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	SPC98	P53540	846 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	ARP7	Q12406	477 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	YOL087C	Q99247	1116 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	LAM4	P38800	1345 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	CHD1	P32657	1468 aa		4.61	□□□□□ -1.67
YFL040W	YFL040W	ESC1	Q03661	1658 aa	Known RBP	4.6	□□□□□ -1.67
YFL040W	YFL040W	PCK1	P10963	549 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	SEC12	P11655	471 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	MCM10	P32354	571 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	SWD1	P39706	426 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	SPC72	P39723	622 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	THI6	P41835	540 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	ENT2	Q05785	613 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	IRC10	Q08118	586 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	RRI2	Q12348	645 aa		4.6	□□□□□ -1.67
YFL040W	YFL040W	GEA2	P39993	1459 aa	Known RBP	4.59	□□□□□ -1.67
YFL040W	YFL040W	GFA1	P14742	717 aa	Known RBP	4.59	□□□□□ -1.67
YFL040W	YFL040W	CAP1	P28495	268 aa	Known RBP	4.59	□□□□□ -1.67
YFL040W	YFL040W	IMA5	P40884	581 aa		4.59	□□□□□ -1.67
YFL040W	YFL040W	MAD3	P47074	515 aa		4.59	□□□□□ -1.67
YFL040W	YFL040W	DAK1	P54838	584 aa	Known RBP	4.59	□□□□□ -1.67
YFL040W	YFL040W	ESP1	Q03018	1630 aa		4.59	□□□□□ -1.68
YFL040W	YFL040W	RKR1	Q04781	1562 aa		4.59	□□□□□ -1.68
YFL040W	YFL040W	DMC1	P25453	334 aa		4.58	□□□□□ -1.68
YFL040W	YFL040W	MSH1	P25846	959 aa		4.58	□□□□□ -1.68
YFL040W	YFL040W	NOC2	P39744	710 aa	Known RBP	4.58	□□□□□ -1.68
YFL040W	YFL040W	VPS27	P40343	622 aa	Known RBP	4.58	□□□□□ -1.68
YFL040W	YFL040W	PMT6	P42934	759 aa		4.58	□□□□□ -1.68
YFL040W	YFL040W	GSM1	P42950	618 aa		4.58	□□□□□ -1.68
YFL040W	YFL040W	STE4	P18851	423 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	APM3	P38153	483 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	IML2	P47031	731 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	VPS73	P53142	486 aa	Known RBP	4.57	□□□□□ -1.68
YFL040W	YFL040W	ARC35	P53731	342 aa	Known RBP	4.57	□□□□□ -1.68
YFL040W	YFL040W	MFM1	Q02783	413 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	NGL2	Q03264	515 aa	Known RBP	4.57	□□□□□ -1.68
YFL040W	YFL040W	BLS1	Q06071	122 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	NEW1	Q08972	1196 aa	Known RBP	4.57	□□□□□ -1.68
YFL040W	YFL040W	MMS1	Q06211	1407 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	DSS4	P32601	143 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	YLF2	P38746	405 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	MNT3	P40549	630 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	MEP3	P53390	489 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	ACS1	Q01574	713 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	TRS23	Q03784	219 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	YDR056C	Q12025	205 aa		4.57	□□□□□ -1.68
YFL040W	YFL040W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
YFL040W	YFL040W	SCC2	Q04002	1493 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	GFD2	P25370	566 aa	Known RBP	4.56	□□□□□ -1.68
YFL040W	YFL040W	CNE1	P27825	502 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	YMC2	P38087	329 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	PSY4	P38193	441 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	BNA1	P47096	177 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	YIP4	P53093	235 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	YRB30	P53107	440 aa	Predicted RBP	4.56	□□□□□ -1.68
YFL040W	YFL040W	USA1	Q03714	838 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	YDR179W-A	Q03983	463 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	RPO31	P04051	1460 aa		4.56	□□□□□ -1.68
YFL040W	YFL040W	NCP1	P16603	691 aa	Known RBP	4.55	□□□□□ -1.68
YFL040W	YFL040W	TDP1	P38319	544 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	STB5	P38699	743 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	MIT1	P40002	666 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	STU2	P46675	888 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	COS12	P53053	380 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	BUD17	P53727	317 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	MDM1	Q01846	1127 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	CRD1	Q07560	283 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	YPL216W	Q08964	1102 aa		4.55	□□□□□ -1.68
YFL040W	YFL040W	MDM20	Q12387	796 aa	Known RBP	4.55	□□□□□ -1.68
YFL040W	YFL040W	PHO5	P00635	467 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	EMP70	P32802	667 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	PIH1	P38768	344 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	VFA1	P40080	203 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	QRI1	P43123	477 aa	Known RBP	4.54	□□□□□ -1.68
YFL040W	YFL040W	POL31	P46957	487 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	RPS15	Q01855	142 aa	Known RBP	4.54	□□□□□ -1.68
YFL040W	YFL040W	EIS1	Q05050	843 aa	Known RBP	4.54	□□□□□ -1.68
YFL040W	YFL040W	HOF1	Q05080	669 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	AAD4	Q07747	329 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	SSM4	P40318	1319 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	PAN1	P32521	1480 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	YPK9	Q12697	1472 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	HSC82	P15108	705 aa	Known RBP	4.54	□□□□□ -1.68
YFL040W	YFL040W	BET2	P20133	325 aa		4.54	□□□□□ -1.68
YFL040W	YFL040W	PRP45	P28004	379 aa	Predicted RBP	4.54	□□□□□ -1.68
YFL040W	YFL040W	CHS3	P29465	1165 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms