RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C ERV1P27882 189 aa3.26□□□□□ -1.89
VPS3YDR495C VPS17P32913 551 aa3.26□□□□□ -1.89
VPS3YDR495C LRG1P35688 1017 aa3.26□□□□□ -1.89
VPS3YDR495C SSP120P39931 234 aaKnown RBP3.26□□□□□ -1.89
VPS3YDR495C CAB2P40506 365 aa3.26□□□□□ -1.89
VPS3YDR495C AGX1P43567 385 aa3.26□□□□□ -1.89
VPS3YDR495C VTC4P47075 721 aa3.26□□□□□ -1.89
VPS3YDR495C REG1Q00816 1014 aa3.26□□□□□ -1.89
VPS3YDR495C YLH47Q06493 454 aa3.26□□□□□ -1.89
VPS3YDR495C STP4Q07351 490 aa3.26□□□□□ -1.89
VPS3YDR495C PML1Q07930 204 aaPredicted RBP3.26□□□□□ -1.89
VPS3YDR495C ICL2Q12031 575 aa3.26□□□□□ -1.89
VPS3YDR495C NBP2Q12163 236 aa3.26□□□□□ -1.89
VPS3YDR495C HOS1Q12214 470 aa3.26□□□□□ -1.89
VPS3YDR495C URA3P03962 267 aa3.26□□□□□ -1.89
VPS3YDR495C SSE1P32589 693 aaKnown RBP3.26□□□□□ -1.89
VPS3YDR495C FRD1P32614 470 aaKnown RBP3.26□□□□□ -1.89
VPS3YDR495C MUP3P38734 546 aa3.26□□□□□ -1.89
VPS3YDR495C MTG2P38860 518 aa3.26□□□□□ -1.89
VPS3YDR495C NAS2P40555 220 aa3.26□□□□□ -1.89
VPS3YDR495C BUD8P41698 603 aa3.26□□□□□ -1.89
VPS3YDR495C FET5P43561 622 aa3.26□□□□□ -1.89
VPS3YDR495C ARC1P46672 376 aaKnown RBP3.26□□□□□ -1.89
VPS3YDR495C EXG2P52911 562 aa3.26□□□□□ -1.89
VPS3YDR495C ERV25P54837 211 aaKnown RBP3.26□□□□□ -1.89
VPS3YDR495C YKR011CQ02209 353 aa3.26□□□□□ -1.89
VPS3YDR495C ECM22Q05958 814 aaPredicted RBP3.26□□□□□ -1.89
VPS3YDR495C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
VPS3YDR495C SPE3Q12074 293 aaKnown RBP3.26□□□□□ -1.89
VPS3YDR495C MDH1P17505 334 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
VPS3YDR495C HNM1P19807 563 aa3.25□□□□□ -1.89
VPS3YDR495C YHR131CP38835 850 aa3.25□□□□□ -1.89
VPS3YDR495C SMF1P38925 575 aa3.25□□□□□ -1.89
VPS3YDR495C AIP1P46680 615 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C KEL2P50090 882 aa3.25□□□□□ -1.89
VPS3YDR495C LCL3P53153 274 aa3.25□□□□□ -1.89
VPS3YDR495C MDR1P53258 950 aa3.25□□□□□ -1.89
VPS3YDR495C VBA4Q04602 768 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C GTB1Q04924 702 aa3.25□□□□□ -1.89
VPS3YDR495C THI21Q08975 551 aa3.25□□□□□ -1.89
VPS3YDR495C PSY3Q12318 242 aa3.25□□□□□ -1.89
VPS3YDR495C ERS1P17261 260 aa3.25□□□□□ -1.89
VPS3YDR495C PRE8P23639 250 aa3.25□□□□□ -1.89
VPS3YDR495C CLB3P24870 427 aa3.25□□□□□ -1.89
VPS3YDR495C KTR3P38130 404 aaPredicted RBP3.25□□□□□ -1.89
VPS3YDR495C FSH1P38777 243 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C SNF12P53628 566 aa3.25□□□□□ -1.89
VPS3YDR495C SQS1P53866 767 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C GCR2Q01722 534 aa3.25□□□□□ -1.89
VPS3YDR495C MMR1Q06324 491 aa3.25□□□□□ -1.89
VPS3YDR495C MCP2Q06567 569 aa3.25□□□□□ -1.89
VPS3YDR495C RIM20Q12033 661 aa3.25□□□□□ -1.89
VPS3YDR495C YLR358CO13565 187 aa3.25□□□□□ -1.89
VPS3YDR495C HOM2P13663 365 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C EST1P17214 699 aaPredicted RBP3.25□□□□□ -1.89
VPS3YDR495C PWP1P21304 576 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C ARG1P22768 420 aa3.25□□□□□ -1.89
VPS3YDR495C NIP1P32497 812 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C TYE7P33122 291 aaPredicted RBP3.25□□□□□ -1.89
VPS3YDR495C SUR1P33300 382 aa3.25□□□□□ -1.89
VPS3YDR495C REG2P38232 338 aa3.25□□□□□ -1.89
VPS3YDR495C TIF5P38431 405 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C MEF2P39677 819 aa3.25□□□□□ -1.89
VPS3YDR495C FLC2P39719 783 aa3.25□□□□□ -1.89
VPS3YDR495C RPN3P40016 523 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C BST1P43571 1029 aa3.25□□□□□ -1.89
VPS3YDR495C STU2P46675 888 aa3.25□□□□□ -1.89
VPS3YDR495C YJL171CP46992 396 aa3.25□□□□□ -1.89
VPS3YDR495C ENP2P48234 707 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C VTC3Q02725 835 aa3.25□□□□□ -1.89
VPS3YDR495C ATG21Q02887 496 aa3.25□□□□□ -1.89
VPS3YDR495C FDC1Q03034 503 aa3.25□□□□□ -1.89
VPS3YDR495C TRI1Q05024 226 aa3.25□□□□□ -1.89
VPS3YDR495C ARV1Q06541 321 aa3.25□□□□□ -1.89
VPS3YDR495C LYS21Q12122 440 aaKnown RBP3.25□□□□□ -1.89
VPS3YDR495C NMD4Q12129 218 aa3.25□□□□□ -1.89
VPS3YDR495C OSW2Q12202 724 aa3.25□□□□□ -1.89
VPS3YDR495C SKS1Q12505 502 aa3.25□□□□□ -1.89
VPS3YDR495C PRP28P23394 588 aa3.24□□□□□ -1.89
VPS3YDR495C SPB1P25582 841 aaPredicted RBP3.24□□□□□ -1.89
VPS3YDR495C YCR051WP25631 222 aa3.24□□□□□ -1.89
VPS3YDR495C MSP1P28737 362 aa3.24□□□□□ -1.89
VPS3YDR495C GIP2P40036 548 aa3.24□□□□□ -1.89
VPS3YDR495C YIL108WP40483 696 aaKnown RBP3.24□□□□□ -1.89
VPS3YDR495C YIR007WP40566 764 aa3.24□□□□□ -1.89
VPS3YDR495C BUD27P43573 796 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
VPS3YDR495C TNA1P53322 534 aa3.24□□□□□ -1.89
VPS3YDR495C XYL2Q07993 356 aa3.24□□□□□ -1.89
VPS3YDR495C YLL054CQ12244 843 aa3.24□□□□□ -1.89
VPS3YDR495C AFI1Q99222 893 aa3.24□□□□□ -1.89
VPS3YDR495C CET1O13297 549 aaPredicted RBP3.24□□□□□ -1.89
VPS3YDR495C RPP1AP05318 106 aaPredicted RBP3.24□□□□□ -1.89
VPS3YDR495C TY2A-LR1P0C2J4 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-FP0CX61 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-GR2P0CX62 438 aa3.24□□□□□ -1.89
VPS3YDR495C TY2A-CP25383 438 aa3.24□□□□□ -1.89
VPS3YDR495C URA7P28274 579 aaKnown RBP3.24□□□□□ -1.89
VPS3YDR495C NIP100P33420 868 aa3.24□□□□□ -1.89
VPS3YDR495C SWH1P35845 1188 aa3.24□□□□□ -1.89
VPS3YDR495C UBP13P38187 747 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms