RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C NGL3Q03210 505 aa2.79□□□□□ -1.96
SSN2YDR443C DON1Q05610 365 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-GR1Q12085 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY3A-GQ12173 290 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C TY1A-OLQ92392 440 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C TY3A-IQ99219 290 aa2.79□□□□□ -1.96
SSN2YDR443C BCK1Q01389 1478 aa2.78□□□□□ -1.96
SSN2YDR443C RNA1P11745 407 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C NTG1P31378 399 aa2.78□□□□□ -1.96
SSN2YDR443C KNS1P32350 737 aaPredicted RBP2.78□□□□□ -1.96
SSN2YDR443C EMC3P36039 253 aa2.78□□□□□ -1.96
SSN2YDR443C ADD66P36040 267 aa2.78□□□□□ -1.96
SSN2YDR443C YKR051WP36142 418 aa2.78□□□□□ -1.96
SSN2YDR443C VPS45P38932 577 aa2.78□□□□□ -1.96
SSN2YDR443C YJR061WP40355 935 aa2.78□□□□□ -1.96
SSN2YDR443C MSN5P52918 1224 aa2.78□□□□□ -1.96
SSN2YDR443C PIL1P53252 339 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C SFB2P53953 876 aa2.78□□□□□ -1.96
SSN2YDR443C ATP25Q03153 612 aa2.78□□□□□ -1.96
SSN2YDR443C ENT4Q07872 247 aa2.78□□□□□ -1.96
SSN2YDR443C ENV7Q12003 364 aa2.78□□□□□ -1.96
SSN2YDR443C SMY1P32364 656 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C SAP190P36123 1033 aa2.78□□□□□ -1.96
SSN2YDR443C PGM2P37012 569 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C PCH2P38126 564 aa2.78□□□□□ -1.96
SSN2YDR443C PFK26P40433 827 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C HNT2P49775 206 aa2.78□□□□□ -1.96
SSN2YDR443C NIT3P49954 291 aa2.78□□□□□ -1.96
SSN2YDR443C CTF18P49956 741 aa2.78□□□□□ -1.96
SSN2YDR443C LRS4Q04087 347 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C PHO84P25297 587 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C MSP1P28737 362 aa2.78□□□□□ -1.96
SSN2YDR443C DGR2P32330 852 aa2.78□□□□□ -1.96
SSN2YDR443C MSC7P38694 644 aa2.78□□□□□ -1.96
SSN2YDR443C NEM1P38757 446 aa2.78□□□□□ -1.96
SSN2YDR443C STT3P39007 718 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C MKT1P40850 830 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C THI6P41835 540 aa2.78□□□□□ -1.96
SSN2YDR443C SHR5P41912 237 aa2.78□□□□□ -1.96
SSN2YDR443C LCL3P53153 274 aa2.78□□□□□ -1.96
SSN2YDR443C YGR130CP53278 816 aa2.78□□□□□ -1.96
SSN2YDR443C CUS1Q02554 436 aaPredicted RBP2.78□□□□□ -1.96
SSN2YDR443C UTP5Q04177 643 aaKnown RBP2.78□□□□□ -1.96
SSN2YDR443C COG8Q04632 607 aa2.78□□□□□ -1.96
SSN2YDR443C PTC5Q12511 572 aa2.78□□□□□ -1.96
SSN2YDR443C SEC39Q12745 709 aa2.78□□□□□ -1.96
SSN2YDR443C ADE3P07245 946 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C VAS1P07806 1104 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C PRP2P20095 876 aaPredicted RBP2.77□□□□□ -1.97
SSN2YDR443C CYS3P31373 394 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C SPC110P32380 944 aa2.77□□□□□ -1.97
SSN2YDR443C DED81P38707 554 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C UBP9P39967 754 aa2.77□□□□□ -1.97
SSN2YDR443C YFL052WP43551 465 aa2.77□□□□□ -1.97
SSN2YDR443C TEL2P53038 688 aa2.77□□□□□ -1.97
SSN2YDR443C YSA1Q01976 231 aa2.77□□□□□ -1.97
SSN2YDR443C HAS1Q03532 505 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C GIS4Q04233 774 aa2.77□□□□□ -1.97
SSN2YDR443C GTB1Q04924 702 aa2.77□□□□□ -1.97
SSN2YDR443C RRT8Q08219 342 aa2.77□□□□□ -1.97
SSN2YDR443C VPS54Q12071 889 aa2.77□□□□□ -1.97
SSN2YDR443C ZRT2Q12436 422 aa2.77□□□□□ -1.97
SSN2YDR443C YEL076C-AP0CX16 216 aa2.77□□□□□ -1.97
SSN2YDR443C YLR464WP0CX17 216 aa2.77□□□□□ -1.97
SSN2YDR443C RIT1P23796 513 aa2.77□□□□□ -1.97
SSN2YDR443C DPH5P32469 300 aaPredicted RBP2.77□□□□□ -1.97
SSN2YDR443C KRE6P32486 720 aa2.77□□□□□ -1.97
SSN2YDR443C DOA4P32571 926 aa2.77□□□□□ -1.97
SSN2YDR443C AFG2P32794 780 aa2.77□□□□□ -1.97
SSN2YDR443C SHM1P37292 490 aaPredicted RBP2.77□□□□□ -1.97
SSN2YDR443C ARL1P38116 183 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C PEX18P38855 283 aa2.77□□□□□ -1.97
SSN2YDR443C YEL076CP39971 216 aa2.77□□□□□ -1.97
SSN2YDR443C AIM20P40451 204 aa2.77□□□□□ -1.97
SSN2YDR443C PPT1P53043 513 aa2.77□□□□□ -1.97
SSN2YDR443C VPS9P54787 451 aa2.77□□□□□ -1.97
SSN2YDR443C MRD1Q06106 887 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C MMR1Q06324 491 aa2.77□□□□□ -1.97
SSN2YDR443C GPB1Q08886 897 aa2.77□□□□□ -1.97
SSN2YDR443C TGL5Q12043 749 aa2.77□□□□□ -1.97
SSN2YDR443C SPE3Q12074 293 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C UIP5P36137 443 aa2.77□□□□□ -1.97
SSN2YDR443C CCL1P37366 393 aa2.77□□□□□ -1.97
SSN2YDR443C KSP1P38691 1029 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C SMC2P38989 1170 aaKnown RBP2.77□□□□□ -1.97
SSN2YDR443C YJR124CP47159 448 aa2.77□□□□□ -1.97
SSN2YDR443C ALT1P52893 592 aa2.77□□□□□ -1.97
SSN2YDR443C GIM3P53900 129 aa2.77□□□□□ -1.97
SSN2YDR443C RAD30Q04049 632 aa2.77□□□□□ -1.97
SSN2YDR443C PSF3Q12146 194 aa2.77□□□□□ -1.97
SSN2YDR443C YLR302CO13544 120 aa2.76□□□□□ -1.97
SSN2YDR443C RPS31P05759 152 aaKnown RBP2.76□□□□□ -1.97
SSN2YDR443C YML002WP0CF17 737 aa2.76□□□□□ -1.97
SSN2YDR443C RPC31P17890 251 aa2.76□□□□□ -1.97
SSN2YDR443C YCK1P23291 538 aa2.76□□□□□ -1.97
SSN2YDR443C SPS22P25380 463 aa2.76□□□□□ -1.97
SSN2YDR443C PUP2P32379 260 aa2.76□□□□□ -1.97
SSN2YDR443C PXL1P36166 706 aa2.76□□□□□ -1.97
SSN2YDR443C ADH5P38113 351 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms