RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	CYK3	Q07533	885 aa		3.14	□□□□□ -1.91
SWF1	YDR126W	CET1	O13297	549 aa	Predicted RBP	3.13	□□□□□ -1.91
SWF1	YDR126W	YPK1	P12688	680 aa	Known RBP	3.13	□□□□□ -1.91
SWF1	YDR126W	BET2	P20133	325 aa		3.13	□□□□□ -1.91
SWF1	YDR126W	GCS1	P35197	352 aa		3.13	□□□□□ -1.91
SWF1	YDR126W	RMA1	P36001	430 aa	Known RBP	3.13	□□□□□ -1.91
SWF1	YDR126W	CCT4	P39078	528 aa	Known RBP	3.13	□□□□□ -1.91
SWF1	YDR126W	SQS1	P53866	767 aa	Known RBP	3.13	□□□□□ -1.91
SWF1	YDR126W	YNL058C	P53947	316 aa		3.13	□□□□□ -1.91
SWF1	YDR126W	DNM1	P54861	757 aa		3.13	□□□□□ -1.91
SWF1	YDR126W	ADR1	P07248	1323 aa		3.13	□□□□□ -1.91
SWF1	YDR126W	YPT1	P01123	206 aa	Known RBP	3.12	□□□□□ -1.91
SWF1	YDR126W	SEC12	P11655	471 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	AEP2	P22136	580 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	YCP4	P25349	247 aa	Known RBP	3.12	□□□□□ -1.91
SWF1	YDR126W	COQ3	P27680	312 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	CDC5	P32562	705 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	ATO2	P32907	282 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	MNN1	P39106	762 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	MAF1	P41910	395 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	YNL092W	P53934	400 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	RPL15B	P54780	204 aa	Predicted RBP	3.12	□□□□□ -1.91
SWF1	YDR126W	MTD1	Q02046	320 aa	Known RBP	3.12	□□□□□ -1.91
SWF1	YDR126W	SRL1	Q08673	210 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	BUD7	Q08754	746 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	PNO1	Q99216	274 aa	Known RBP	3.12	□□□□□ -1.91
SWF1	YDR126W	AIM44	Q99299	758 aa		3.12	□□□□□ -1.91
SWF1	YDR126W	YEL076C-A	P0CX16	216 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	YLR464W	P0CX17	216 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	PCK1	P10963	549 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	CBP3	P21560	335 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	AIM17	P23180	465 aa	Known RBP	3.11	□□□□□ -1.91
SWF1	YDR126W	HXT4	P32467	576 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	YEL076C	P39971	216 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	YAT2	P40017	923 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	PMT3	P47190	753 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	RNH70	P53331	553 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	RAD33	Q04231	177 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	YOR111W	Q99210	232 aa		3.11	□□□□□ -1.91
SWF1	YDR126W	MAK32	P23060	363 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	FTH1	P38310	465 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	SDH8	P38345	138 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	RAD26	P40352	1085 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	CIR1	P42940	261 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	RNR4	P49723	345 aa	Known RBP	3.1	□□□□□ -1.91
SWF1	YDR126W	UME1	Q03010	460 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
SWF1	YDR126W	VPS5	Q92331	675 aa		3.1	□□□□□ -1.91
SWF1	YDR126W	CWH43	P25618	953 aa		3.09	□□□□□ -1.91
SWF1	YDR126W	GDA1	P32621	518 aa		3.09	□□□□□ -1.91
SWF1	YDR126W	SRP68	P38687	599 aa	Known RBP	3.09	□□□□□ -1.91
SWF1	YDR126W	RRP8	P38961	392 aa	Known RBP	3.09	□□□□□ -1.91
SWF1	YDR126W	LAS21	P40367	830 aa		3.09	□□□□□ -1.91
SWF1	YDR126W	MDV1	P47025	714 aa		3.09	□□□□□ -1.91
SWF1	YDR126W	LYS20	P48570	428 aa	Known RBP	3.09	□□□□□ -1.91
SWF1	YDR126W	SNA4	Q07549	140 aa		3.09	□□□□□ -1.91
SWF1	YDR126W	NGL1	Q08213	363 aa	Known RBP	3.09	□□□□□ -1.91
SWF1	YDR126W	CHO2	P05374	869 aa	Known RBP	3.08	□□□□□ -1.92
SWF1	YDR126W	IMD2	P38697	523 aa	Known RBP	3.08	□□□□□ -1.92
SWF1	YDR126W	FLO5	P38894	1075 aa		3.08	□□□□□ -1.92
SWF1	YDR126W	CIN1	P40987	1014 aa		3.08	□□□□□ -1.92
SWF1	YDR126W	IMD3	P50095	523 aa	Known RBP	3.08	□□□□□ -1.92
SWF1	YDR126W	GPG1	P53130	126 aa		3.08	□□□□□ -1.92
SWF1	YDR126W	VTC3	Q02725	835 aa		3.08	□□□□□ -1.92
SWF1	YDR126W	SNU56	Q03782	492 aa	Known RBP	3.08	□□□□□ -1.92
SWF1	YDR126W	ILS1	P09436	1072 aa	Known RBP	3.07	□□□□□ -1.92
SWF1	YDR126W	RPT3	P33298	428 aa	Known RBP	3.07	□□□□□ -1.92
SWF1	YDR126W	TOM71	P38825	639 aa	Known RBP	3.07	□□□□□ -1.92
SWF1	YDR126W	MAM1	P40065	302 aa		3.07	□□□□□ -1.92
SWF1	YDR126W	NOP2	P40991	618 aa	Known RBP	3.07	□□□□□ -1.92
SWF1	YDR126W	GPP1	P41277	250 aa	Known RBP	3.07	□□□□□ -1.92
SWF1	YDR126W	COG2	P53271	262 aa		3.07	□□□□□ -1.92
SWF1	YDR126W	NDD1	Q08887	554 aa		3.07	□□□□□ -1.92
SWF1	YDR126W	ATX2	Q12067	313 aa		3.07	□□□□□ -1.92
SWF1	YDR126W	UBX3	Q12229	455 aa		3.07	□□□□□ -1.92
SWF1	YDR126W	NUP145	P49687	1317 aa		3.07	□□□□□ -1.92
SWF1	YDR126W	ATP12	P22135	325 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	PLC1	P32383	869 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	KES1	P35844	434 aa	Known RBP	3.06	□□□□□ -1.92
SWF1	YDR126W	MTG2	P38860	518 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	YIL152W	P40455	235 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	YIR016W	P40572	265 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	IRC5	P43610	853 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	MDR1	P53258	950 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
SWF1	YDR126W	BOP3	P53958	396 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	LYS21	Q12122	440 aa	Known RBP	3.06	□□□□□ -1.92
SWF1	YDR126W	GET3	Q12154	354 aa	Known RBP	3.06	□□□□□ -1.92
SWF1	YDR126W	Q0010	Q9ZZX9	128 aa		3.06	□□□□□ -1.92
SWF1	YDR126W	RRP43	P25359	394 aa	Predicted RBP	3.05	□□□□□ -1.92
SWF1	YDR126W	SER1	P33330	395 aa	Known RBP	3.05	□□□□□ -1.92
SWF1	YDR126W	GND1	P38720	489 aa	Known RBP	3.05	□□□□□ -1.92
SWF1	YDR126W	SKY1	Q03656	742 aa		3.05	□□□□□ -1.92
SWF1	YDR126W	RAD34	Q06665	692 aa		3.05	□□□□□ -1.92
SWF1	YDR126W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
SWF1	YDR126W	LCB4	Q12246	624 aa		3.05	□□□□□ -1.92
SWF1	YDR126W	GAL4	P04386	881 aa		3.04	□□□□□ -1.92
SWF1	YDR126W	AMD2	P22580	549 aa		3.04	□□□□□ -1.92
SWF1	YDR126W	NMD2	P38798	1089 aa	Known RBP	3.04	□□□□□ -1.92
SWF1	YDR126W	PEA2	P40091	420 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 169.8 ms