RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C FBP1P09201 348 aa3.05□□□□□ -1.92
SOK1YDR006C MRE11P32829 692 aa3.05□□□□□ -1.92
SOK1YDR006C MAC1P35192 417 aa3.05□□□□□ -1.92
SOK1YDR006C LAS1P36146 502 aaPredicted RBP3.05□□□□□ -1.92
SOK1YDR006C POL12P38121 705 aaPredicted RBP3.05□□□□□ -1.92
SOK1YDR006C ECM21P38167 1117 aaKnown RBP3.05□□□□□ -1.92
SOK1YDR006C OYE3P41816 400 aaPredicted RBP3.05□□□□□ -1.92
SOK1YDR006C THI6P41835 540 aa3.05□□□□□ -1.92
SOK1YDR006C IML2P47031 731 aa3.05□□□□□ -1.92
SOK1YDR006C ASK10P48361 1146 aa3.05□□□□□ -1.92
SOK1YDR006C BRE5P53741 515 aaKnown RBP3.05□□□□□ -1.92
SOK1YDR006C OAZ1Q02803 292 aa3.05□□□□□ -1.92
SOK1YDR006C GUD1Q07729 489 aa3.05□□□□□ -1.92
SOK1YDR006C NGL1Q08213 363 aaKnown RBP3.05□□□□□ -1.92
SOK1YDR006C BUG1Q12191 341 aa3.05□□□□□ -1.92
SOK1YDR006C CAD1P24813 409 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C SPS22P25380 463 aa3.04□□□□□ -1.92
SOK1YDR006C SSZ1P38788 538 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C STN1P38960 494 aa3.04□□□□□ -1.92
SOK1YDR006C FUN12P39730 1002 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C ECM27P47144 725 aa3.04□□□□□ -1.92
SOK1YDR006C YDL183CP48569 320 aa3.04□□□□□ -1.92
SOK1YDR006C RPA49Q01080 415 aaPredicted RBP3.04□□□□□ -1.92
SOK1YDR006C ERB1Q04660 807 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C ADE13Q05911 482 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C BLS1Q06071 122 aa3.04□□□□□ -1.92
SOK1YDR006C RGC1Q06108 1083 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C THI21Q08975 551 aa3.04□□□□□ -1.92
SOK1YDR006C RUD3Q12234 484 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C AI3P03877 415 aa3.04□□□□□ -1.92
SOK1YDR006C PET111P08468 800 aa3.04□□□□□ -1.92
SOK1YDR006C YKR078WP36158 585 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C YBR139WP38109 508 aa3.04□□□□□ -1.92
SOK1YDR006C BEM4P39011 633 aa3.04□□□□□ -1.92
SOK1YDR006C YIL077CP40508 320 aa3.04□□□□□ -1.92
SOK1YDR006C MNT2P53059 558 aa3.04□□□□□ -1.92
SOK1YDR006C SLD3P53135 668 aa3.04□□□□□ -1.92
SOK1YDR006C ABZ2Q03266 374 aa3.04□□□□□ -1.92
SOK1YDR006C YPS7Q06325 596 aa3.04□□□□□ -1.92
SOK1YDR006C SMC5Q08204 1093 aa3.04□□□□□ -1.92
SOK1YDR006C PDH1Q12428 516 aaKnown RBP3.04□□□□□ -1.92
SOK1YDR006C PRP4P20053 465 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C MNE1P24720 663 aa3.03□□□□□ -1.92
SOK1YDR006C APM3P38153 483 aa3.03□□□□□ -1.92
SOK1YDR006C YIL092WP40497 633 aa3.03□□□□□ -1.92
SOK1YDR006C SEC28P40509 296 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C LCB2P40970 561 aa3.03□□□□□ -1.92
SOK1YDR006C NUP84P52891 726 aa3.03□□□□□ -1.92
SOK1YDR006C HOP2P53187 214 aa3.03□□□□□ -1.92
SOK1YDR006C MTD1Q02046 320 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C PEX25Q02969 394 aa3.03□□□□□ -1.92
SOK1YDR006C NHX1Q04121 633 aa3.03□□□□□ -1.92
SOK1YDR006C RSF1Q05043 376 aa3.03□□□□□ -1.92
SOK1YDR006C NOP6Q07623 225 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C CWC2Q12046 339 aaPredicted RBP3.03□□□□□ -1.92
SOK1YDR006C SVS1Q12254 260 aa3.03□□□□□ -1.92
SOK1YDR006C ENT1Q12518 454 aa3.03□□□□□ -1.92
SOK1YDR006C YIL002W-AQ3E7Z5 69 aa3.03□□□□□ -1.92
SOK1YDR006C GSY1P23337 708 aa3.03□□□□□ -1.92
SOK1YDR006C CDS1P38221 457 aa3.03□□□□□ -1.92
SOK1YDR006C NPR3P38742 1146 aa3.03□□□□□ -1.92
SOK1YDR006C SCC4P40090 624 aa3.03□□□□□ -1.92
SOK1YDR006C MET28P40573 187 aa3.03□□□□□ -1.92
SOK1YDR006C DUO1P53168 247 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C YGR130CP53278 816 aa3.03□□□□□ -1.92
SOK1YDR006C DSL1P53847 754 aa3.03□□□□□ -1.92
SOK1YDR006C SLU7Q02775 382 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C SPC19Q03954 165 aa3.03□□□□□ -1.92
SOK1YDR006C COG8Q04632 607 aa3.03□□□□□ -1.92
SOK1YDR006C WHI4Q07655 649 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C UAF30Q08747 228 aa3.03□□□□□ -1.92
SOK1YDR006C LEU9Q12166 604 aaKnown RBP3.03□□□□□ -1.92
SOK1YDR006C AVL9Q12500 764 aa3.03□□□□□ -1.92
SOK1YDR006C LAT1P12695 482 aaKnown RBP3.02□□□□□ -1.93
SOK1YDR006C MRP20P32387 263 aa3.02□□□□□ -1.93
SOK1YDR006C SEG2P34250 1132 aa3.02□□□□□ -1.93
SOK1YDR006C SRP72P38688 640 aaKnown RBP3.02□□□□□ -1.93
SOK1YDR006C BUD27P43573 796 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SOK1YDR006C TIM21P53220 239 aa3.02□□□□□ -1.93
SOK1YDR006C NNF2P53253 936 aa3.02□□□□□ -1.93
SOK1YDR006C CBK1P53894 756 aa3.02□□□□□ -1.93
SOK1YDR006C INN1P53901 409 aa3.02□□□□□ -1.93
SOK1YDR006C CDA1Q06702 301 aa3.02□□□□□ -1.93
SOK1YDR006C MLH2Q07980 695 aa3.02□□□□□ -1.93
SOK1YDR006C MCA1Q08601 432 aa3.02□□□□□ -1.93
SOK1YDR006C CLP1Q08685 445 aaPredicted RBP3.02□□□□□ -1.93
SOK1YDR006C NUR1Q12066 484 aa3.02□□□□□ -1.93
SOK1YDR006C GET3Q12154 354 aaKnown RBP3.02□□□□□ -1.93
SOK1YDR006C YOR022CQ12204 715 aa3.02□□□□□ -1.93
SOK1YDR006C YDR215CQ12240 137 aa3.02□□□□□ -1.93
SOK1YDR006C LEU2P04173 364 aaPredicted RBP3.02□□□□□ -1.93
SOK1YDR006C TPK1P06244 397 aa3.02□□□□□ -1.93
SOK1YDR006C ABF1P14164 731 aa3.02□□□□□ -1.93
SOK1YDR006C FUR1P18562 216 aaKnown RBP3.02□□□□□ -1.93
SOK1YDR006C TRX1P22217 103 aaKnown RBP3.02□□□□□ -1.93
SOK1YDR006C YCK1P23291 538 aa3.02□□□□□ -1.93
SOK1YDR006C RSC6P25632 483 aa3.02□□□□□ -1.93
SOK1YDR006C YCR061WP25639 631 aa3.02□□□□□ -1.93
SOK1YDR006C FUN30P31380 1131 aa3.02□□□□□ -1.93
SOK1YDR006C SAC6P32599 642 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms