RNA–Protein interactions for RNA: YDR002W

YRB1, Transcript of Ran GTPase binding protein, yeast

Gene YRB1, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRB1	YDR002W	RAD26	P40352	1085 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	UTP18	P40362	594 aa	Predicted RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	PXA1	P41909	870 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	FAA4	P47912	694 aa	Known RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	RAD17	P48581	401 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	MNP1	P53163	194 aa	Predicted RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	DSL1	P53847	754 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	YNL193W	P53870	558 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	ALF1	P53904	254 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	VPS30	Q02948	557 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	SNZ1	Q03148	297 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	RRB1	Q04225	511 aa	Known RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	HFD1	Q04458	532 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	ADE13	Q05911	482 aa	Known RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	ESC2	Q06340	456 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	MDM36	Q06820	579 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	BMS1	Q08965	1183 aa	Known RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	APL4	Q12028	832 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	RRG1	Q12167	365 aa	Predicted RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	APC2	Q12440	853 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	RKM4	Q12504	494 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	HSH49	Q99181	213 aa	Predicted RBP	2.52	□□□□□ -2.01
YRB1	YDR002W	NUP170	P38181	1502 aa		2.52	□□□□□ -2.01
YRB1	YDR002W	SUP35	P05453	685 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	NOT3	P06102	836 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	CDC34	P14682	295 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	APA1	P16550	321 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	NUP1	P20676	1076 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	RER1	P25560	188 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	CDC48	P25694	835 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	SSE1	P32589	693 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	MIC60	P36112	540 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	YBL028C	P38202	106 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	UBS1	P38290	277 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	FTH1	P38310	465 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	YHL041W	P38730	149 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	SWD1	P39706	426 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	TOK1	P40310	691 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	YIR042C	P40586	236 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	AGX1	P43567	385 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	IRC8	P47046	822 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	RNR4	P49723	345 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	HSV2	P50079	448 aa	Predicted RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	NUP84	P52891	726 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	GPG1	P53130	126 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	EFM5	P53200	248 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	GIM3	P53900	129 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	REX2	P54964	269 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	SNP1	Q00916	300 aa	Predicted RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	SMD2	Q06217	110 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	CSR1	Q06705	408 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	MLH2	Q07980	695 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	REX3	Q12090	404 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	FAL1	Q12099	399 aa	Known RBP	2.51	□□□□□ -2.01
YRB1	YDR002W	GLE1	Q12315	538 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	ENT1	Q12518	454 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	PDR10	P51533	1564 aa		2.51	□□□□□ -2.01
YRB1	YDR002W	SSK22	P25390	1331 aa	Predicted RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	SEC3	P33332	1336 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	HMG1	P12683	1054 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	KSS1	P14681	368 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	KCC4	P25389	1037 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	CMK1	P27466	446 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	RPL8B	P29453	256 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	DEP1	P31385	405 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	PET309	P32522	965 aa	Predicted RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	TFB1	P32776	642 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	HIS7	P33734	552 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	STE13	P33894	931 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	COY1	P34237	679 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	DHR2	P36009	735 aa	Predicted RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	TYS1	P36421	394 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	CTM1	P38818	585 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	VPS45	P38932	577 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	ACA1	P39970	489 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	FMP10	P40098	244 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	GPP2	P40106	250 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	RIC1	P40395	1056 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	NDC80	P40460	691 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	HIS6	P40545	261 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	ZIM17	P42844	174 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	ERP6	P53198	216 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	RBG2	P53295	368 aa	Known RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	MEP3	P53390	489 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	MRPL19	P53875	158 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	VPS9	P54787	451 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	GTR1	Q00582	310 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	RRN5	Q02983	363 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	SYF1	Q04048	859 aa	Predicted RBP	2.5	□□□□□ -2.01
YRB1	YDR002W	ARP9	Q05123	467 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	MCP2	Q06567	569 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	TAH18	Q12181	623 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	IQG1	Q12280	1495 aa		2.5	□□□□□ -2.01
YRB1	YDR002W	NUP157	P40064	1391 aa	Known RBP	2.49	□□□□□ -2.01
YRB1	YDR002W	SSM4	P40318	1319 aa		2.49	□□□□□ -2.01
YRB1	YDR002W	PDR15	Q04182	1529 aa	Known RBP	2.49	□□□□□ -2.01
YRB1	YDR002W	OM45	P16547	393 aa		2.49	□□□□□ -2.01
YRB1	YDR002W	PRP4	P20053	465 aa	Known RBP	2.49	□□□□□ -2.01
YRB1	YDR002W	SAN1	P22470	610 aa		2.49	□□□□□ -2.01
YRB1	YDR002W	PRP28	P23394	588 aa		2.49	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms