RNA–Protein interactions for RNA: YDL172C

YDL172C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL172C, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL172CYDL172C RFC5P38251 354 aa6.11□□□□□ -1.43
YDL172CYDL172C EXO1P39875 702 aa6.11□□□□□ -1.43
YDL172CYDL172C CTF18P49956 741 aa6.11□□□□□ -1.43
YDL172CYDL172C SWS2P53937 143 aa6.11□□□□□ -1.43
YDL172CYDL172C TIM8P57744 87 aa6.11□□□□□ -1.43
YDL172CYDL172C TRM82Q03774 444 aa6.11□□□□□ -1.43
YDL172CYDL172C HRD3Q05787 833 aa6.11□□□□□ -1.43
YDL172CYDL172C IWR1Q07532 353 aaPredicted RBP6.11□□□□□ -1.43
YDL172CYDL172C MLH2Q07980 695 aa6.11□□□□□ -1.43
YDL172CYDL172C RCL1Q08096 367 aaPredicted RBP6.11□□□□□ -1.43
YDL172CYDL172C RSB1Q08417 382 aa6.11□□□□□ -1.43
YDL172CYDL172C APC5Q08683 685 aa6.11□□□□□ -1.43
YDL172CYDL172C SAM4Q08985 325 aaKnown RBP6.11□□□□□ -1.43
YDL172CYDL172C UTP20P35194 2493 aaKnown RBP6.11□□□□□ -1.43
YDL172CYDL172C CHS2P14180 963 aa6.1□□□□□ -1.43
YDL172CYDL172C VBA3P25594 458 aa6.1□□□□□ -1.43
YDL172CYDL172C TGL4P36165 910 aa6.1□□□□□ -1.43
YDL172CYDL172C VBA5P36172 582 aa6.1□□□□□ -1.43
YDL172CYDL172C NOP4P37838 685 aaKnown RBP6.1□□□□□ -1.43
YDL172CYDL172C UBS1P38290 277 aa6.1□□□□□ -1.43
YDL172CYDL172C YNR040WP53736 256 aa6.1□□□□□ -1.43
YDL172CYDL172C RPA49Q01080 415 aaPredicted RBP6.1□□□□□ -1.43
YDL172CYDL172C PIR3Q03180 325 aa6.1□□□□□ -1.43
YDL172CYDL172C BNA5Q05979 453 aa6.1□□□□□ -1.43
YDL172CYDL172C RLP24Q07915 199 aaKnown RBP6.1□□□□□ -1.43
YDL172CYDL172C NDD1Q08887 554 aa6.1□□□□□ -1.43
YDL172CYDL172C SLP1Q12232 587 aa6.1□□□□□ -1.43
YDL172CYDL172C LCB4Q12246 624 aa6.1□□□□□ -1.43
YDL172CYDL172C SVS1Q12254 260 aa6.1□□□□□ -1.43
YDL172CYDL172C MED1Q12321 566 aa6.1□□□□□ -1.43
YDL172CYDL172C RKM5Q12367 367 aa6.1□□□□□ -1.43
YDL172CYDL172C HFA1P32874 2273 aa6.1□□□□□ -1.43
YDL172CYDL172C PGI1P12709 554 aaKnown RBP6.09□□□□□ -1.43
YDL172CYDL172C COX11P19516 300 aaKnown RBP6.09□□□□□ -1.43
YDL172CYDL172C DAL82P21705 255 aa6.09□□□□□ -1.43
YDL172CYDL172C SAT4P25333 603 aaKnown RBP6.09□□□□□ -1.43
YDL172CYDL172C CAP1P28495 268 aaKnown RBP6.09□□□□□ -1.43
YDL172CYDL172C PEP12P32854 288 aa6.09□□□□□ -1.43
YDL172CYDL172C PFD1P46988 109 aa6.09□□□□□ -1.43
YDL172CYDL172C ACS2P52910 683 aaKnown RBP6.09□□□□□ -1.43
YDL172CYDL172C COG8Q04632 607 aa6.09□□□□□ -1.43
YDL172CYDL172C SSL1Q04673 461 aaPredicted RBP6.09□□□□□ -1.43
YDL172CYDL172C PMT7Q06644 662 aa6.09□□□□□ -1.43
YDL172CYDL172C ELG1Q12050 791 aa6.09□□□□□ -1.43
YDL172CYDL172C YOL098CQ12496 1037 aa6.09□□□□□ -1.43
YDL172CYDL172C TRS33Q99394 268 aa6.09□□□□□ -1.43
YDL172CYDL172C MEC1P38111 2368 aa6.09□□□□□ -1.43
YDL172CYDL172C PYC1P11154 1178 aaKnown RBP6.08□□□□□ -1.44
YDL172CYDL172C RSC6P25632 483 aa6.08□□□□□ -1.44
YDL172CYDL172C URA1P28272 314 aaPredicted RBP6.08□□□□□ -1.44
YDL172CYDL172C PXA2P34230 853 aa6.08□□□□□ -1.44
YDL172CYDL172C YJL070CP40361 888 aa6.08□□□□□ -1.44
YDL172CYDL172C SER33P40510 469 aa6.08□□□□□ -1.44
YDL172CYDL172C YJR079WP47126 109 aa6.08□□□□□ -1.44
YDL172CYDL172C TCO89Q08921 799 aa6.08□□□□□ -1.44
YDL172CYDL172C GPR1Q12361 961 aa6.08□□□□□ -1.44
YDL172CYDL172C RPC31P17890 251 aa6.07□□□□□ -1.44
YDL172CYDL172C PHO87P25360 923 aa6.07□□□□□ -1.44
YDL172CYDL172C CBF2P32504 956 aa6.07□□□□□ -1.44
YDL172CYDL172C PUB1P32588 453 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
YDL172CYDL172C TYE7P33122 291 aaPredicted RBP6.07□□□□□ -1.44
YDL172CYDL172C YBR053CP38235 358 aa6.07□□□□□ -1.44
YDL172CYDL172C MUM2P38236 366 aa6.07□□□□□ -1.44
YDL172CYDL172C RSC1P53236 928 aa6.07□□□□□ -1.44
YDL172CYDL172C SPG3Q04398 127 aaPredicted RBP6.07□□□□□ -1.44
YDL172CYDL172C YML096WQ04489 525 aa6.07□□□□□ -1.44
YDL172CYDL172C TRE1Q08919 783 aa6.07□□□□□ -1.44
YDL172CYDL172C NAG1Q8TGN9 163 aa6.07□□□□□ -1.44
YDL172CYDL172C HRP1Q99383 534 aaKnown RBP6.07□□□□□ -1.44
YDL172CYDL172C YBR056W-AI2HB52 66 aa6.06□□□□□ -1.44
YDL172CYDL172C MRP10O75012 95 aa6.06□□□□□ -1.44
YDL172CYDL172C SPT15P13393 240 aaKnown RBP6.06□□□□□ -1.44
YDL172CYDL172C HAP4P14064 554 aa6.06□□□□□ -1.44
YDL172CYDL172C SEC63P14906 663 aa6.06□□□□□ -1.44
YDL172CYDL172C CDC42P19073 191 aa6.06□□□□□ -1.44
YDL172CYDL172C ELM1P32801 640 aa6.06□□□□□ -1.44
YDL172CYDL172C BST1P43571 1029 aa6.06□□□□□ -1.44
YDL172CYDL172C PRP24P49960 444 aaKnown RBP6.06□□□□□ -1.44
YDL172CYDL172C YGL140CP53120 1219 aa6.06□□□□□ -1.44
YDL172CYDL172C COP1P53622 1201 aaKnown RBP6.06□□□□□ -1.44
YDL172CYDL172C YPL113CQ02961 396 aa6.06□□□□□ -1.44
YDL172CYDL172C THI73Q07904 523 aa6.06□□□□□ -1.44
YDL172CYDL172C PSR2Q07949 397 aa6.06□□□□□ -1.44
YDL172CYDL172C HMI1Q12039 706 aa6.06□□□□□ -1.44
YDL172CYDL172C SLX4Q12098 748 aa6.06□□□□□ -1.44
YDL172CYDL172C YDR061WQ12298 539 aa6.06□□□□□ -1.44
YDL172CYDL172C RNR2P09938 399 aaKnown RBP6.05□□□□□ -1.44
YDL172CYDL172C SEC6P32844 805 aa6.05□□□□□ -1.44
YDL172CYDL172C CYM1P32898 989 aa6.05□□□□□ -1.44
YDL172CYDL172C TTI1P36097 1038 aa6.05□□□□□ -1.44
YDL172CYDL172C RRP3P38712 501 aaKnown RBP6.05□□□□□ -1.44
YDL172CYDL172C MND1P53102 219 aa6.05□□□□□ -1.44
YDL172CYDL172C SUR7P54003 302 aa6.05□□□□□ -1.44
YDL172CYDL172C RPN4Q03465 531 aa6.05□□□□□ -1.44
YDL172CYDL172C YLR012CQ07927 99 aa6.05□□□□□ -1.44
YDL172CYDL172C PER33Q12144 273 aa6.05□□□□□ -1.44
YDL172CYDL172C ARP7Q12406 477 aa6.05□□□□□ -1.44
YDL172CYDL172C PNS1Q12412 539 aa6.05□□□□□ -1.44
YDL172CYDL172C RPL19AP0CX82 189 aaKnown RBP6.04□□□□□ -1.44
YDL172CYDL172C RPL19BP0CX83 189 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms