RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	MNN4	P36044	1178 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	ECM13	P38195	257 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	SIP3	P38717	1229 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	EXO1	P39875	702 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	PRY1	P47032	299 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	NNF1	P47149	201 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	CUE3	P53137	624 aa	Known RBP	4.64	□□□□□ -1.67
RPN6	YDL097C	SRP1	Q02821	542 aa	Known RBP	4.64	□□□□□ -1.67
RPN6	YDL097C	TRS23	Q03784	219 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	YMR018W	Q04364	514 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	FUS2	Q05670	677 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	NDD1	Q08887	554 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	YPR027C	Q12079	277 aa		4.64	□□□□□ -1.67
RPN6	YDL097C	SUC2	P00724	532 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	PHO4	P07270	312 aa	Known RBP	4.63	□□□□□ -1.67
RPN6	YDL097C	CHS1	P08004	1131 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	YKL151C	P36059	337 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	MRPL16	P38064	232 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	LSM4	P40070	187 aa	Known RBP	4.63	□□□□□ -1.67
RPN6	YDL097C	PIR3	Q03180	325 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	BSC6	Q08280	497 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	RRP6	Q12149	733 aa	Known RBP	4.63	□□□□□ -1.67
RPN6	YDL097C	NBP2	Q12163	236 aa		4.63	□□□□□ -1.67
RPN6	YDL097C	RPL7A	P05737	244 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	MCM1	P11746	286 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	FRS2	P15625	503 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	PRI2	P20457	528 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	CAP1	P28495	268 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	MCM2	P29469	868 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	MVD1	P32377	396 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	TAE1	P38340	232 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	RSM25	P40496	264 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	CDC1	P40986	491 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	GAT1	P43574	510 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	HSV2	P50079	448 aa	Predicted RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	SUT1	P53032	299 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	MOT3	P54785	490 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	RPC11	Q04307	110 aa	Predicted RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	ECM38	Q05902	660 aa	Predicted RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	GUP2	Q08929	609 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	PER33	Q12144	273 aa		4.62	□□□□□ -1.67
RPN6	YDL097C	RPL7B	Q12213	244 aa	Known RBP	4.62	□□□□□ -1.67
RPN6	YDL097C	RED1	P14291	827 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	TPM1	P17536	199 aa	Known RBP	4.61	□□□□□ -1.67
RPN6	YDL097C	MRPL33	P20084	86 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	GCD6	P32501	712 aa	Known RBP	4.61	□□□□□ -1.67
RPN6	YDL097C	UBP13	P38187	747 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	GEM1	P39722	662 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	SPG5	P42933	373 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	TOF1	P53840	1238 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	SIZ1	Q04195	904 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	YDR338C	Q05497	695 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	FPR4	Q06205	392 aa	Predicted RBP	4.61	□□□□□ -1.67
RPN6	YDL097C	YPQ2	Q06328	317 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	DDC1	Q08949	612 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	YOL098C	Q12496	1037 aa		4.61	□□□□□ -1.67
RPN6	YDL097C	PYC1	P11154	1178 aa	Known RBP	4.6	□□□□□ -1.67
RPN6	YDL097C	PDC5	P16467	563 aa	Known RBP	4.6	□□□□□ -1.67
RPN6	YDL097C	SEC62	P21825	274 aa		4.6	□□□□□ -1.67
RPN6	YDL097C	KNS1	P32350	737 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN6	YDL097C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RPN6	YDL097C	SCD5	P34758	872 aa		4.6	□□□□□ -1.67
RPN6	YDL097C	STT3	P39007	718 aa	Known RBP	4.6	□□□□□ -1.67
RPN6	YDL097C	DAK2	P43550	591 aa		4.6	□□□□□ -1.67
RPN6	YDL097C	ALK1	P43633	760 aa	Known RBP	4.6	□□□□□ -1.67
RPN6	YDL097C	HSH155	P49955	971 aa	Known RBP	4.6	□□□□□ -1.67
RPN6	YDL097C	COG7	P53195	279 aa		4.6	□□□□□ -1.67
RPN6	YDL097C	SPR28	Q04921	423 aa		4.6	□□□□□ -1.67
RPN6	YDL097C	SMC1	P32908	1225 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	BMH2	P34730	273 aa	Known RBP	4.59	□□□□□ -1.67
RPN6	YDL097C	TAF14	P35189	244 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	CTP1	P38152	299 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	SEA4	P38164	1038 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	LAM1	P38851	1228 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	SAM37	P50110	327 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	SDA1	P53313	767 aa	Known RBP	4.59	□□□□□ -1.67
RPN6	YDL097C	CDC55	Q00362	526 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	HRQ1	Q05549	1077 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	DIC1	Q06143	298 aa		4.59	□□□□□ -1.67
RPN6	YDL097C	TUF1	P02992	437 aa	Known RBP	4.58	□□□□□ -1.68
RPN6	YDL097C	VMA3	P25515	160 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	LRE1	P25579	583 aa	Known RBP	4.58	□□□□□ -1.68
RPN6	YDL097C	OMA1	P36163	345 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	SHM1	P37292	490 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN6	YDL097C	APM3	P38153	483 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	NPP2	P39997	493 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	KAP123	P40069	1113 aa	Known RBP	4.58	□□□□□ -1.68
RPN6	YDL097C	IRC24	P40580	263 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	HXT8	P40886	569 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	MAD1	P40957	749 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	SMC3	P47037	1230 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	YJR030C	P47101	745 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	YJR054W	P47114	497 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	CBK1	P53894	756 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	PEX25	Q02969	394 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	HRD3	Q05787	833 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	STP3	Q05937	343 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	CDC45	Q08032	650 aa		4.58	□□□□□ -1.68
RPN6	YDL097C	RCL1	Q08096	367 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN6	YDL097C	GNT1	Q12096	491 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms