RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C YPK3P38070 525 aa5.86□□□□□ -1.47
SSK22YCR073C CYS4P32582 507 aaKnown RBP5.86□□□□□ -1.47
SSK22YCR073C ROD1Q02805 837 aa5.86□□□□□ -1.47
SSK22YCR073C SRL4Q03085 281 aa5.86□□□□□ -1.47
SSK22YCR073C PRM6Q04705 352 aa5.86□□□□□ -1.47
SSK22YCR073C UTP4Q06679 776 aaKnown RBP5.86□□□□□ -1.47
SSK22YCR073C YEH2Q07950 538 aa5.86□□□□□ -1.47
SSK22YCR073C PMS1P14242 873 aa5.86□□□□□ -1.47
SSK22YCR073C ADP1P25371 1049 aa5.86□□□□□ -1.47
SSK22YCR073C TGL4P36165 910 aa5.86□□□□□ -1.47
SSK22YCR073C DYS1P38791 387 aa5.86□□□□□ -1.47
SSK22YCR073C FLC2P39719 783 aa5.86□□□□□ -1.47
SSK22YCR073C LEM3P42838 414 aa5.86□□□□□ -1.47
SSK22YCR073C NOP19P53317 196 aaPredicted RBP5.86□□□□□ -1.47
SSK22YCR073C SNF4P12904 322 aa5.85□□□□□ -1.47
SSK22YCR073C RPS7AP26786 190 aaKnown RBP5.85□□□□□ -1.47
SSK22YCR073C TPO5P36029 618 aa5.85□□□□□ -1.47
SSK22YCR073C SAW1P39735 261 aa5.85□□□□□ -1.47
SSK22YCR073C COG6P53959 839 aa5.85□□□□□ -1.47
SSK22YCR073C PLP1Q04004 230 aa5.85□□□□□ -1.47
SSK22YCR073C SCM3Q12334 223 aa5.85□□□□□ -1.47
SSK22YCR073C URA7P28274 579 aaKnown RBP5.85□□□□□ -1.47
SSK22YCR073C SPR1P32603 445 aa5.85□□□□□ -1.47
SSK22YCR073C NPL6P32832 435 aa5.85□□□□□ -1.47
SSK22YCR073C TGL1P34163 548 aa5.85□□□□□ -1.47
SSK22YCR073C SPR6Q01684 191 aa5.85□□□□□ -1.47
SSK22YCR073C SWP1Q02795 286 aa5.85□□□□□ -1.47
SSK22YCR073C DIB1Q06819 143 aaPredicted RBP5.85□□□□□ -1.47
SSK22YCR073C LSO1Q3E827 93 aa5.85□□□□□ -1.47
SSK22YCR073C TOP3P13099 656 aa5.85□□□□□ -1.47
SSK22YCR073C ITR2P30606 609 aa5.85□□□□□ -1.47
SSK22YCR073C YBL036CP38197 257 aa5.85□□□□□ -1.47
SSK22YCR073C TRF5P48561 642 aaKnown RBP5.85□□□□□ -1.47
SSK22YCR073C RNR4P49723 345 aaKnown RBP5.85□□□□□ -1.47
SSK22YCR073C YNL058CP53947 316 aa5.85□□□□□ -1.47
SSK22YCR073C IES3Q12345 250 aa5.85□□□□□ -1.47
SSK22YCR073C SRD1P09007 221 aa5.84□□□□□ -1.47
SSK22YCR073C HSP30P25619 332 aa5.84□□□□□ -1.47
SSK22YCR073C AEP1P32493 518 aa5.84□□□□□ -1.47
SSK22YCR073C MRM2P53123 320 aa5.84□□□□□ -1.47
SSK22YCR073C TMA20P89886 181 aaPredicted RBP5.84□□□□□ -1.47
SSK22YCR073C CSM3Q04659 317 aa5.84□□□□□ -1.47
SSK22YCR073C ATG17Q06410 417 aa5.84□□□□□ -1.47
SSK22YCR073C ARR1Q06596 294 aa5.84□□□□□ -1.47
SSK22YCR073C RMD5Q12508 421 aa5.84□□□□□ -1.47
SSK22YCR073C CBS2P14905 389 aa5.84□□□□□ -1.47
SSK22YCR073C MRPL25P23369 157 aa5.84□□□□□ -1.47
SSK22YCR073C CLB2P24869 491 aa5.84□□□□□ -1.47
SSK22YCR073C POL4P25615 582 aa5.84□□□□□ -1.47
SSK22YCR073C ATG12P38316 186 aa5.84□□□□□ -1.47
SSK22YCR073C RMR1P53060 241 aa5.84□□□□□ -1.47
SSK22YCR073C COX20Q04935 205 aa5.84□□□□□ -1.47
SSK22YCR073C THI7Q05998 598 aa5.84□□□□□ -1.47
SSK22YCR073C PCL8Q08966 492 aa5.84□□□□□ -1.47
SSK22YCR073C YAP1P19880 650 aaKnown RBP5.84□□□□□ -1.47
SSK22YCR073C DBP5P20449 482 aaKnown RBP5.84□□□□□ -1.47
SSK22YCR073C AMS1P22855 1083 aa5.84□□□□□ -1.47
SSK22YCR073C BUD31P25337 157 aaPredicted RBP5.84□□□□□ -1.47
SSK22YCR073C YKR023WP36119 530 aaKnown RBP5.84□□□□□ -1.47
SSK22YCR073C RPC37P36121 282 aa5.84□□□□□ -1.47
SSK22YCR073C CCL1P37366 393 aa5.84□□□□□ -1.47
SSK22YCR073C HOP2P53187 214 aa5.84□□□□□ -1.47
SSK22YCR073C GND2P53319 492 aa5.84□□□□□ -1.47
SSK22YCR073C ORC3P54790 616 aa5.84□□□□□ -1.47
SSK22YCR073C HXT15P54854 567 aa5.84□□□□□ -1.47
SSK22YCR073C YMR160WQ03823 816 aa5.84□□□□□ -1.47
SSK22YCR073C EMG1Q06287 252 aaKnown RBP5.84□□□□□ -1.47
SSK22YCR073C GGA1Q06336 557 aa5.84□□□□□ -1.47
SSK22YCR073C AAD3P25612 363 aa5.83□□□□□ -1.48
SSK22YCR073C ABZ1P37254 787 aaPredicted RBP5.83□□□□□ -1.48
SSK22YCR073C SPC72P39723 622 aa5.83□□□□□ -1.48
SSK22YCR073C SEC27P41811 889 aaKnown RBP5.83□□□□□ -1.48
SSK22YCR073C RPA49Q01080 415 aaPredicted RBP5.83□□□□□ -1.48
SSK22YCR073C PSF3Q12146 194 aa5.83□□□□□ -1.48
SSK22YCR073C BUG1Q12191 341 aa5.83□□□□□ -1.48
SSK22YCR073C ATG11Q12527 1178 aa5.83□□□□□ -1.48
SSK22YCR073C GCY1P14065 312 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SSK22YCR073C MRF1P30775 413 aaPredicted RBP5.83□□□□□ -1.48
SSK22YCR073C AIM26P32858 118 aa5.83□□□□□ -1.48
SSK22YCR073C UGP1P32861 499 aaKnown RBP5.83□□□□□ -1.48
SSK22YCR073C EXO84P38261 753 aa5.83□□□□□ -1.48
SSK22YCR073C PES4P39684 611 aa5.83□□□□□ -1.48
SSK22YCR073C YJR061WP40355 935 aa5.83□□□□□ -1.48
SSK22YCR073C LAM5P43560 674 aa5.83□□□□□ -1.48
SSK22YCR073C ECM9Q02202 377 aa5.83□□□□□ -1.48
SSK22YCR073C YMR209CQ03648 457 aa5.83□□□□□ -1.48
SSK22YCR073C IVY1Q04934 453 aa5.83□□□□□ -1.48
SSK22YCR073C GPI13Q07830 1017 aa5.83□□□□□ -1.48
SSK22YCR073C MNL2Q12205 849 aa5.83□□□□□ -1.48
SSK22YCR073C SPE1P08432 466 aa5.83□□□□□ -1.48
SSK22YCR073C MSH2P25847 964 aa5.83□□□□□ -1.48
SSK22YCR073C MET4P32389 672 aa5.83□□□□□ -1.48
SSK22YCR073C CYM1P32898 989 aa5.83□□□□□ -1.48
SSK22YCR073C NTR2P36118 322 aaPredicted RBP5.83□□□□□ -1.48
SSK22YCR073C YBR241CP38142 488 aa5.83□□□□□ -1.48
SSK22YCR073C MEF2P39677 819 aa5.83□□□□□ -1.48
SSK22YCR073C YPR003CP53394 754 aa5.83□□□□□ -1.48
SSK22YCR073C PTA1Q01329 785 aaPredicted RBP5.83□□□□□ -1.48
SSK22YCR073C CHS2P14180 963 aa5.82□□□□□ -1.48
SSK22YCR073C PHO89P38361 574 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms