RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	XRS2	P33301	854 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	YBR284W	P38150	797 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	YER158C	P40095	573 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	APT1	P49435	187 aa	Known RBP	5.73	□□□□□ -1.49
ROX3	YBL093C	MDR1	P53258	950 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	RTT102	P53330	157 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	SFB2	P53953	876 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	TIM8	P57744	87 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	GIR2	Q03768	265 aa	Predicted RBP	5.73	□□□□□ -1.49
ROX3	YBL093C	YDR132C	Q03900	495 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	MLH2	Q07980	695 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	FLC1	Q08967	793 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	YPR071W	Q12346	211 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	YOL098C	Q12496	1037 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	YLR358C	O13565	187 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	TOM70	P07213	617 aa	Known RBP	5.72	□□□□□ -1.49
ROX3	YBL093C	HSF1	P10961	833 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	PET123	P17558	318 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	UBC1	P21734	215 aa	Known RBP	5.72	□□□□□ -1.49
ROX3	YBL093C	HXT1	P32465	570 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	MUD1	P32605	298 aa	Known RBP	5.72	□□□□□ -1.49
ROX3	YBL093C	TIM23	P32897	222 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	YKL023W	P36103	277 aa	Known RBP	5.72	□□□□□ -1.49
ROX3	YBL093C	FLR1	P38124	548 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	POA1	P38218	177 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	EAF5	P39995	279 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	NPP2	P39997	493 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	MND2	P40577	368 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	CEP3	P40969	608 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	COS5	P47187	383 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	GCV2	P49095	1034 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	YGR012W	P53206	393 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	YNL146W	P53906	100 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	VTC3	Q02725	835 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	YPR078C	Q06813	372 aa		5.72	□□□□□ -1.49
ROX3	YBL093C	PET111	P08468	800 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	SWI6	P09959	803 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	STE11	P23561	717 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	NPP1	P25353	742 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	SRP101	P32916	621 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	NIP100	P33420	868 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	TSL1	P38427	1098 aa	Known RBP	5.71	□□□□□ -1.5
ROX3	YBL093C	KSP1	P38691	1029 aa	Known RBP	5.71	□□□□□ -1.5
ROX3	YBL093C	SET5	P38890	526 aa	Known RBP	5.71	□□□□□ -1.5
ROX3	YBL093C	SMC2	P38989	1170 aa	Known RBP	5.71	□□□□□ -1.5
ROX3	YBL093C	CAJ1	P39101	391 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	PSP2	P50109	593 aa	Known RBP	5.71	□□□□□ -1.5
ROX3	YBL093C	ORC5	P50874	479 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	ESBP6	P53918	673 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	SML1	Q04964	104 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	OPY2	Q06810	360 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	TPO1	Q07824	586 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	SIL1	Q08199	421 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	MET7	Q08645	548 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	DAS2	Q12084	232 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	YOR131C	Q12486	218 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	HBN1	Q96VH4	193 aa		5.71	□□□□□ -1.5
ROX3	YBL093C	MAS2	P11914	482 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
ROX3	YBL093C	DPH2	P32461	534 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	DOM34	P33309	386 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	TCD1	P38756	429 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	NGL3	Q03210	505 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	UTP14	Q04500	899 aa	Known RBP	5.7	□□□□□ -1.5
ROX3	YBL093C	SOV1	Q04748	898 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	VAC14	Q06708	880 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	SLX4	Q12098	748 aa		5.7	□□□□□ -1.5
ROX3	YBL093C	RPP2A	P05319	106 aa	Known RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	CKI1	P20485	582 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	CDC20	P26309	610 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	TMT1	P32643	299 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	BCS1	P32839	456 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	AFR1	P33304	620 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	REC104	P33323	182 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	TRZ1	P36159	838 aa	Predicted RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	JNM1	P36224	373 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	OCA5	P38738	679 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	YMR124W	P39523	943 aa	Known RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	RSP5	P39940	809 aa	Known RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	BUD16	P39988	312 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	SMC3	P47037	1230 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	ASN1	P49089	572 aa	Known RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	HSH155	P49955	971 aa	Known RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	SHE10	P53075	577 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	MNP1	P53163	194 aa	Predicted RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	CUL3	P53202	744 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	VPS60	Q03390	229 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	PPM1	Q04081	328 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	ECM7	Q06200	448 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	CDA1	Q06702	301 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	TSR1	Q07381	788 aa	Known RBP	5.69	□□□□□ -1.5
ROX3	YBL093C	YLR001C	Q07895	862 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	ICL2	Q12031	575 aa		5.69	□□□□□ -1.5
ROX3	YBL093C	ERG11	P10614	530 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	CDC42	P19073	191 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	IME1	P21190	360 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	EMC1	P25574	760 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	DPB3	P27344	201 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	YHR020W	P38708	688 aa	Known RBP	5.68	□□□□□ -1.5
ROX3	YBL093C	GGA2	P38817	585 aa	Known RBP	5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms