RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
HLCS-202ENST00000399120 RBBP5Q15291 538 aaKnown RBP12.95□□□□□ -0.34
HLCS-202ENST00000399120 MAGEB6Q8N7X4 407 aa12.95□□□□□ -0.34
HLCS-202ENST00000399120 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
HLCS-202ENST00000399120 CFTRP13569 1480 aa12.95□□□□□ -0.34
HLCS-202ENST00000399120 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
HLCS-202ENST00000399120 CABS1Q96KC9 395 aa12.95□□□□□ -0.34
HLCS-202ENST00000399120 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
HLCS-202ENST00000399120 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 KRT3P12035 628 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 DCUN1D2Q6PH85 259 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 RBSNQ9H1K0 784 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
HLCS-202ENST00000399120 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 CCDC141Q6ZP82 1450 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 RNF168Q8IYW5 571 aaPredicted RBP12.94□□□□□ -0.34
HLCS-202ENST00000399120 VPS16Q9H269 839 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 TTLL3Q9Y4R7 772 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
HLCS-202ENST00000399120 RASSF2P50749 326 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 ZNF174Q15697 407 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 CHMP2AO43633 222 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 PDE1AP54750 535 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 MIER3Q7Z3K6 550 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
HLCS-202ENST00000399120 MUM1L1Q5H9M0 696 aa12.94□□□□□ -0.34
HLCS-202ENST00000399120 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 MIGA1Q8NAN2 632 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
HLCS-202ENST00000399120 CTTNBP2NLQ9P2B4 639 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
HLCS-202ENST00000399120 DKC1O60832 514 aaKnown RBP eCLIP12.93□□□□□ -0.34
HLCS-202ENST00000399120 ANXA1P04083 346 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 MTMR3Q13615 1198 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 PSPC1Q8WXF1 523 aaKnown RBP12.93□□□□□ -0.34
HLCS-202ENST00000399120 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 LPXNO60711 386 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 PLCB4Q15147 1175 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 NUP58Q9BVL2 599 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 IGF1RP08069 1367 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 GOLGA6BA6NDN3 693 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 GRM8O00222 908 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
HLCS-202ENST00000399120 HS1BP3Q53T59 392 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 PPP4R1Q8TF05 950 aa12.93□□□□□ -0.34
HLCS-202ENST00000399120 CEP104O60308 925 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 TROVE2P10155 538 aaKnown RBP eCLIP12.92□□□□□ -0.34
HLCS-202ENST00000399120 UBE2Q2Q8WVN8 375 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 TBC1D8O95759 1140 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 PAK2Q13177 524 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 SYCE1Q8N0S2 351 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 ARHGEF35A5YM69 484 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
HLCS-202ENST00000399120 MUM1Q2TAK8 710 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 CCDC105Q8IYK2 499 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 RUFY3Q7L099 469 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 KLHL7Q8IXQ5 586 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 VPS37BQ9H9H4 285 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 NOP56O00567 594 aaKnown RBP12.92□□□□□ -0.34
HLCS-202ENST00000399120 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 TMOD4Q9NZQ9 345 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
HLCS-202ENST00000399120 DENND2CQ68D51 928 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 EYA3Q99504 573 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 SPECC1L-ADORA2AF8WAN1 911 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 RNF40O75150 1001 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 RXRAP19793 462 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 COPS6Q7L5N1 327 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 P3H4Q92791 437 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
HLCS-202ENST00000399120 BAG5Q9UL15 447 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 STK38LQ9Y2H1 464 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
HLCS-202ENST00000399120 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 AK2P54819 239 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 ARHGAP42A6NI28 874 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
HLCS-202ENST00000399120 CCNT1O60563 726 aaKnown RBP12.91□□□□□ -0.34
HLCS-202ENST00000399120 IGHDP01880 384 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 CREB3L3Q68CJ9 461 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 NXNQ6DKJ4 435 aa12.91□□□□□ -0.34
HLCS-202ENST00000399120 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
HLCS-202ENST00000399120 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms