RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 WDR64B1ANS9 1081 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 PHACTR2O75167 634 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 TRPA1O75762 1119 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 ACPPP15309 386 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
GABPB1-204ENST00000396464 ZNF394Q53GI3 561 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 FMNL3Q8IVF7 1028 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 ASAP3Q8TDY4 903 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 OSMRQ99650 979 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 PLCD4Q9BRC7 762 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
GABPB1-204ENST00000396464 A6NHS1 94 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 HMGB1P1B2RPK0 211 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-204ENST00000396464 TM4SF5O14894 197 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 EDN3P14138 238 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 PAX3P23760 479 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
GABPB1-204ENST00000396464 EIF1AXP47813 144 aaKnown RBP6.62□□□□□ -1.35
GABPB1-204ENST00000396464 RHBDL3P58872 404 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 RACK1P63244 317 aaKnown RBP6.62□□□□□ -1.35
GABPB1-204ENST00000396464 DSC3Q14574 896 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 NME8Q8N427 588 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 TMEM102Q8N9M5 508 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-204ENST00000396464 JDP2Q8WYK2 163 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 MFSD14AQ96MC6 490 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 GGNBP2Q9H3C7 697 aa6.62□□□□□ -1.35
GABPB1-204ENST00000396464 DDX41Q9UJV9 622 aaKnown RBP6.62□□□□□ -1.35
GABPB1-204ENST00000396464 PRR19A6NJB7 356 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 SPINK2P20155 84 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 MPSTP25325 297 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 USP11P51784 963 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 C4orf46Q504U0 113 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 TSHZ1Q6ZSZ6 1077 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 DTX1Q86Y01 620 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 FBXL6Q8N531 539 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 HHIPQ96QV1 700 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 WWC3Q9ULE0 1092 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 SOX13Q9UN79 622 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 ANGEL1Q9UNK9 670 aaKnown RBP6.61□□□□□ -1.35
GABPB1-204ENST00000396464 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
GABPB1-204ENST00000396464 MEGF11A6BM72 1044 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 NFKBIEO00221 500 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 NDUFB5O43674 189 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 SH3BP5O60239 455 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-204ENST00000396464 USP5P45974 858 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 AMPD3Q01432 767 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 EHHADHQ08426 723 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 SERINC3Q13530 473 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 LONRF3Q496Y0 759 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.6□□□□□ -1.35
GABPB1-204ENST00000396464 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 PIM2Q9P1W9 311 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
GABPB1-204ENST00000396464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-204ENST00000396464 PRC1O43663 620 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 PDGFRBP09619 1106 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 NFKBIBQ15653 356 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 PAOXQ6QHF9 649 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 SNX29Q8TEQ0 813 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 NXPE3Q969Y0 559 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 CCDC136Q96JN2 1154 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 RNPC3Q96LT9 517 aaKnown RBP6.59□□□□□ -1.35
GABPB1-204ENST00000396464 RPS6KC1Q96S38 1066 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 ZKSCAN3Q9BRR0 538 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 YIPF2Q9BWQ6 316 aa6.59□□□□□ -1.35
GABPB1-204ENST00000396464 SOX1O00570 391 aaPredicted RBP6.59□□□□□ -1.36
GABPB1-204ENST00000396464 EREGO14944 169 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 NPR3P17342 541 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 BIRC2Q13490 618 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 ZFYVE27Q5T4F4 411 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 VPS37DQ86XT2 251 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 TMC1Q8TDI8 760 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 CHRDQ9H2X0 955 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 PRKAB1Q9Y478 270 aa6.59□□□□□ -1.36
GABPB1-204ENST00000396464 FAM95CA0A1B0GW59 222 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 TNFRSF21O75509 655 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 FAM13AO94988 1023 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 YBX3P16989 372 aaKnown RBP eCLIP6.58□□□□□ -1.361e-6■□□□□ 11.3
GABPB1-204ENST00000396464 ATP2B2Q01814 1243 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 PLCB3Q01970 1234 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 GSTM4Q03013 218 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 ODR4Q5SWX8 454 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 HGSNATQ68CP4 663 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 CKAP2LQ8IYA6 745 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 SMG8Q8ND04 991 aaKnown RBP6.58□□□□□ -1.36
GABPB1-204ENST00000396464 MAF1Q9H063 256 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 PNMA2Q9UL42 364 aa6.58□□□□□ -1.36
GABPB1-204ENST00000396464 TTF2Q9UNY4 1162 aaKnown RBP6.58□□□□□ -1.36
GABPB1-204ENST00000396464 PPP1R12AO14974 1030 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms