RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Lrrfip2Q91WK0 415 aa8.66□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Eps8l3Q91WL0 600 aa8.66□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Eif3aP23116 1344 aaKnown RBP8.66□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Hnrnph2P70333 449 aaKnown RBP8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Pde1cQ64338 706 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Mum1Q6DID5 682 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Frat2Q8K025 231 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Akr1e2Q9DCT1 301 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Il20Q9JKV9 176 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Clip2Q9Z0H8 1047 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Abca9Q8K449 1623 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Itsn2Q9Z0R6 1659 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 AU022751B1B0V2 589 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Ppfibp2O35711 882 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Diaph2O70566 1098 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Myl1P05977 188 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Cplx2P84086 134 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Klra3Q64329 266 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 KaznQ69ZS8 779 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Fhod1Q6P9Q4 1197 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Ccdc82Q6PG04 518 aa8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 TpppQ7TQD2 218 aaKnown RBP8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Arid5bQ8BM75 1188 aaKnown RBP8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Ddx27Q921N6 760 aaKnown RBP8.65□□□□□ -1.02
Bdnf-211ENSMUST00000176893 Rabgap1A2AWA9 1064 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Proca1B0QZF7 307 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 InhbeO08717 350 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Hspa1lP16627 641 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Pdia3P27773 505 aaKnown RBP8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Cct5P80316 541 aaKnown RBP8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Dtx3lQ3UIR3 748 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Bbof1Q3V079 533 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Rassf6Q80UQ2 353 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Nutm1Q8BHP2 1126 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 DpydQ8CHR6 1025 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Psmd6Q99JI4 389 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 4930550L24RikQ99PA7 320 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 KynuQ9CXF0 464 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 TtpalQ9D3D0 343 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Syap1Q9D5V6 365 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 TnmdQ9EP64 317 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Nfe2l3Q9WTM4 660 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Sall3Q62255 1320 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Asxl2Q8BZ32 1370 aa8.65□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Zscan20B2KFW1 1030 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Pibf1E9Q6K3 756 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Nrg3O35181 713 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Cd151O35566 253 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Mdm2P23804 489 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Klra9Q2TJJ8 266 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 SargQ8BI29 606 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Mrps27Q8BK72 415 aaKnown RBP8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Slc7a4Q8BLQ7 635 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Acsbg1Q99PU5 721 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Polr3cQ9D483 533 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Osbpl5Q9ER64 874 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 FibpQ9JI19 357 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Klra10Q9R1G6 266 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Chd1P40201 1711 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Cfap65Q3V0B4 1847 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Znf568E9PYI1 671 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 NpcdF8VQB8 469 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ap1m1P35585 423 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Fgfr1opQ66JX5 399 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ankrd13dQ6PD24 605 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Sh3tc2Q80VA5 1289 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ttc7aQ8BGB2 858 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Rufy1Q8BIJ7 712 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Slc4a8Q8JZR6 1089 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ccdc92Q8VDN4 314 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Camk2gQ923T9 529 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 CarsQ9ER72 831 aaKnown RBP8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Gm6133B2RY53 190 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Qtrt2B8ZXI1 415 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Pde11aP0C1Q2 933 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Polr2fP61219 127 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Slc8a1P70414 970 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Serpinb6Q60854 378 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Vamp1Q62442 118 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Fan1Q69ZT1 1020 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Catsper4Q8BVN3 442 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Strip2Q8C9H6 844 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 SynpoQ8CC35 929 aaKnown RBP8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Dact1Q8R4A3 778 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 ApobrQ8VBT6 942 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Osbpl1aQ91XL9 950 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ribc1Q9D0B8 379 aa8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Mad1l1Q9WTX8 717 aaKnown RBP8.64□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Skint5A7XUY5 1461 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ifit1bl1D3Z6F0 470 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Mctp1E9PV86 951 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Tspyl3Q3UYP3 334 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Znf697Q569E7 569 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Cyp2c67Q569X9 491 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Jakmip1Q8BVL9 626 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Zfpm2Q8CCH7 1151 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ssh3Q8K330 649 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 HnrnpmQ9D0E1 729 aaKnown RBP8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 Ccdc130Q9D516 385 aa8.63□□□□□ -1.03
Bdnf-211ENSMUST00000176893 AvenQ9D9K3 342 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms