Protein–RNA interactions for Protein: P05977

Myl1, Myosin light chain 1/3, skeletal muscle isoform, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Myl1P05977 Gm25239-201ENSMUST00000174915 86 ntBASIC39.96■■■■□ 3.99
Myl1P05977 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
Myl1P05977 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Myl1P05977 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Myl1P05977 Gm15042-201ENSMUST00000120212 883 ntBASIC35.15■■■■□ 3.22
Myl1P05977 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Myl1P05977 Gm24109-201ENSMUST00000175489 103 ntBASIC34.5■■■■□ 3.11
Myl1P05977 Gm15045-201ENSMUST00000117359 883 ntBASIC34.39■■■■□ 3.1
Myl1P05977 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
Myl1P05977 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Myl1P05977 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
Myl1P05977 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Myl1P05977 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Myl1P05977 Gm23366-201ENSMUST00000175022 89 ntBASIC33.41■■■□□ 2.94
Myl1P05977 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Myl1P05977 Psd-208ENSMUST00000224556 2034 ntBASIC33.12■■■□□ 2.89
Myl1P05977 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.02■■■□□ 2.88
Myl1P05977 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Myl1P05977 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Myl1P05977 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Myl1P05977 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Myl1P05977 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Myl1P05977 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
Myl1P05977 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Myl1P05977 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Myl1P05977 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Myl1P05977 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.28■■■□□ 2.76
Myl1P05977 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.21■■■□□ 2.75
Myl1P05977 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Myl1P05977 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Myl1P05977 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.98■■■□□ 2.71
Myl1P05977 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Myl1P05977 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Myl1P05977 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.76■■■□□ 2.67
Myl1P05977 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.74■■■□□ 2.67
Myl1P05977 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Myl1P05977 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Myl1P05977 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Myl1P05977 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Myl1P05977 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Myl1P05977 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Myl1P05977 Gm25238-201ENSMUST00000174914 89 ntBASIC31.47■■■□□ 2.63
Myl1P05977 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.43■■■□□ 2.62
Myl1P05977 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Myl1P05977 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.15■■■□□ 2.58
Myl1P05977 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Myl1P05977 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Myl1P05977 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Myl1P05977 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Myl1P05977 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Myl1P05977 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.92■■■□□ 2.54
Myl1P05977 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Myl1P05977 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.86■■■□□ 2.53
Myl1P05977 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
Myl1P05977 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Myl1P05977 Gm27325-201ENSMUST00000175467 74 ntBASIC30.82■■■□□ 2.52
Myl1P05977 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Myl1P05977 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Myl1P05977 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Myl1P05977 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.59■■■□□ 2.49
Myl1P05977 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Myl1P05977 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Myl1P05977 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.52■■■□□ 2.48
Myl1P05977 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.49■■■□□ 2.47
Myl1P05977 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.47■■■□□ 2.47
Myl1P05977 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Myl1P05977 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Myl1P05977 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
Myl1P05977 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Myl1P05977 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Myl1P05977 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Myl1P05977 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
Myl1P05977 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Myl1P05977 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Myl1P05977 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Myl1P05977 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Myl1P05977 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.14■■■□□ 2.41
Myl1P05977 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Myl1P05977 Rab21-202ENSMUST00000218831 843 ntBASIC30.12■■■□□ 2.41
Myl1P05977 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Myl1P05977 Gm25262-201ENSMUST00000174934 133 ntBASIC30.04■■■□□ 2.4
Myl1P05977 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.03■■■□□ 2.4
Myl1P05977 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.03■■■□□ 2.4
Myl1P05977 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Myl1P05977 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.01■■■□□ 2.39
Myl1P05977 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Myl1P05977 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Myl1P05977 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Myl1P05977 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Myl1P05977 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Myl1P05977 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.71■■■□□ 2.35
Myl1P05977 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Myl1P05977 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.66■■■□□ 2.34
Myl1P05977 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Myl1P05977 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Myl1P05977 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Myl1P05977 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.47■■■□□ 2.31
Myl1P05977 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Myl1P05977 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Myl1P05977 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.46■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms