RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Snrpa1P57784 255 aaKnown RBP15.3■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Ppfia3P60469 1194 aa15.3■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Eif4enif1Q9EST3 983 aaKnown RBP15.3■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Ubr3Q5U430 1889 aa15.3■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 NpeppsQ11011 920 aa15.3■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Cgref1Q8R1U2 281 aa15.3■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Znfx1Q8R151 1909 aaKnown RBP15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Tmem59lQ7TNI2 337 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Jakmip2D3YXK0 820 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 FosbP13346 338 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Ubash3aQ3V3E1 624 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Nlrp9aQ66X03 949 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Rnf41Q8BH75 317 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Phc3Q8CHP6 981 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Pes1Q9EQ61 584 aaKnown RBP15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Myh15E9Q264 1925 aa15.29■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Pcdhb9E9Q5G2 828 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Npy5rO70342 466 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Slc7a1Q09143 622 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Q8BZJ8 459 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Pcdhgc5Q91XW9 944 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Bicd2Q921C5 820 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Q9CYI0 393 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Adamtsl1Q8BLI0 1745 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Mctp1E9PV86 951 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Anks1aP59672 1150 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Dhx40Q6PE54 779 aaKnown RBP15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Ankib1Q6ZPS6 1085 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Dhx38Q80X98 1228 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Hook1Q8BIL5 728 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Tmem67Q8BR76 992 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Q8VDP2 222 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Terf2ipQ91VL8 393 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Tlcd1Q99JT6 247 aa15.28■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Snai1Q02085 264 aa15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Zkscan8Q8BSL0 588 aa15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Shisa4Q8CA71 197 aa15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Pnpla6Q3TRM4 1355 aa15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Tdo2P48776 406 aa15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Spout1Q3UHX9 385 aaKnown RBP15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Fsd1Q7TPM6 496 aa15.27■□□□□ 0.04
Prpf38b-201ENSMUST00000029480 Ess2O70279 479 aa15.27■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Zkscan4Q5SZT6 480 aa15.27■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Nrbp1Q99J45 535 aa15.27■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Pla2g12bQ99P27 195 aa15.27■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Cops6O88545 324 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 CalrP14211 416 aaKnown RBP15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Slitrk3Q810B9 980 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Hps6Q8BLY7 805 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Kri1Q8VDQ9 704 aaKnown RBP15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 FliiQ9JJ28 1271 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 NagaQ9QWR8 415 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Togaram1Q6A070 1776 aaKnown RBP15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Kansl3A2RSY1 903 aaKnown RBP15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Ube4aE9Q735 1028 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Gpr182P43142 395 aa15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Sptlc2P97363 560 aaKnown RBP15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Arglu1Q3UL36 271 aaKnown RBP15.26■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Aox3G3X982 1335 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Slfnl1Q8BHW9 410 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 NenfQ9CQ45 171 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Cyp2d34L7N463 504 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Nxf2Q4ZGD8 691 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Ankrd13dQ6PD24 605 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Bola3Q8CEI1 110 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Zbtb43Q9DAI4 467 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Naaladl2A0A0N4SUJ3 795 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Dnai2A2AC93 623 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Calm1P0DP26 149 aaKnown RBP15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Calm2P0DP27 149 aaKnown RBP15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Calm3P0DP28 149 aaKnown RBP15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Ccdc82Q6PG04 518 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Fsd2Q8BZ52 692 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 LratQ9JI60 231 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Trip6Q9Z1Y4 480 aa15.25■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Timm10P62073 90 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Kcnb1Q03717 857 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Itga6Q61739 1091 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Mns1Q61884 491 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Pim2Q62070 370 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Slf2Q6P9P0 1278 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Kif1bpQ6ZPU9 617 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Lrrc8aQ80WG5 810 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 HmcesQ8R1M0 353 aaKnown RBP15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Riok3Q9DBU3 519 aaKnown RBP15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Tpd52l1O54818 204 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Prl7d1P04769 244 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 HalP35492 657 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Tubb4bP68372 445 aaKnown RBP15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Ccdc174Q3U155 467 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Pla2g4eQ50L42 875 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 TrhQ62361 256 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Ifit1Q64282 463 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Ano6Q6P9J9 911 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Smc2Q8CG48 1191 aaKnown RBP15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Zfp831A2ADM8 1628 aa15.24■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Col11a2Q64739 1736 aa15.23■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Cd3dP04235 173 aa15.23■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Tmtc2Q56A06 836 aa15.23■□□□□ 0.03
Prpf38b-201ENSMUST00000029480 Fam71bQ5STT6 665 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms