RNA–Protein interactions for RNA: YPR030W

CSR2, Transcript of Nuclear ubiquitin protein ligase binding protein, yeast

Gene CSR2, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cellular bud, Mitochondria .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSR2	YPR030W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.25	□□□□□ -1.73
CSR2	YPR030W	TY1B-ER1	Q03612	1755 aa		4.25	□□□□□ -1.73
CSR2	YPR030W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.25	□□□□□ -1.73
CSR2	YPR030W	TY1B-GR2	Q12269	1755 aa		4.25	□□□□□ -1.73
CSR2	YPR030W	TY1B-OL	Q12273	1755 aa		4.25	□□□□□ -1.73
CSR2	YPR030W	TY1B-PL	Q12414	1755 aa	Known RBP	4.25	□□□□□ -1.73
CSR2	YPR030W	GEA1	P47102	1408 aa	Predicted RBP	4.25	□□□□□ -1.73
CSR2	YPR030W	SPT7	P35177	1332 aa		4.23	□□□□□ -1.73
CSR2	YPR030W	YPR148C	Q06523	435 aa		4.22	□□□□□ -1.73
CSR2	YPR030W	DNF1	P32660	1571 aa		4.21	□□□□□ -1.73
CSR2	YPR030W	TY1B-BR	Q12193	1756 aa		4.21	□□□□□ -1.74
CSR2	YPR030W	TY1B-GR3	Q12316	1755 aa		4.21	□□□□□ -1.74
CSR2	YPR030W	TY1B-OR	Q92393	1755 aa		4.21	□□□□□ -1.74
CSR2	YPR030W	DMA1	P38823	416 aa		4.2	□□□□□ -1.74
CSR2	YPR030W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.2	□□□□□ -1.74
CSR2	YPR030W	LEO1	P38439	464 aa		4.19	□□□□□ -1.74
CSR2	YPR030W	TCB2	P48231	1178 aa		4.19	□□□□□ -1.74
CSR2	YPR030W	SNT2	P53127	1403 aa		4.19	□□□□□ -1.74
CSR2	YPR030W	GDB1	Q06625	1536 aa		4.19	□□□□□ -1.74
CSR2	YPR030W	VPS15	P22219	1454 aa		4.19	□□□□□ -1.74
CSR2	YPR030W	TY1B-JR2	P47100	1755 aa	Known RBP	4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-ER2	Q03619	1755 aa		4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-MR1	Q04214	1755 aa		4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-NL1	Q12112	1755 aa		4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-GR1	Q12141	1755 aa		4.18	□□□□□ -1.74
CSR2	YPR030W	TY1B-BL	Q12490	1755 aa		4.18	□□□□□ -1.74
CSR2	YPR030W	IME2	P32581	645 aa		4.18	□□□□□ -1.74
CSR2	YPR030W	MHP1	P43638	1398 aa		4.17	□□□□□ -1.74
CSR2	YPR030W	ARO1	P08566	1588 aa	Known RBP	4.17	□□□□□ -1.74
CSR2	YPR030W	CAT8	P39113	1433 aa		4.16	□□□□□ -1.74
CSR2	YPR030W	URN1	Q06525	465 aa	Known RBP	4.16	□□□□□ -1.74
CSR2	YPR030W	IQG1	Q12280	1495 aa		4.16	□□□□□ -1.74
CSR2	YPR030W	PDR12	Q02785	1511 aa		4.16	□□□□□ -1.74
CSR2	YPR030W	YIR014W	P40570	242 aa		4.15	□□□□□ -1.74
CSR2	YPR030W	SIS2	P36024	562 aa		4.14	□□□□□ -1.75
CSR2	YPR030W	OPY1	P38271	328 aa		4.14	□□□□□ -1.75
CSR2	YPR030W	VTH1	P40438	1549 aa		4.14	□□□□□ -1.75
CSR2	YPR030W	VTH2	P40890	1549 aa		4.14	□□□□□ -1.75
CSR2	YPR030W	CLC1	P17891	233 aa		4.14	□□□□□ -1.75
CSR2	YPR030W	GEA2	P39993	1459 aa	Known RBP	4.13	□□□□□ -1.75
CSR2	YPR030W	IOC4	Q04213	475 aa		4.13	□□□□□ -1.75
CSR2	YPR030W	SAS10	Q12136	610 aa	Predicted RBP	4.12	□□□□□ -1.75
CSR2	YPR030W	RPO21	P04050	1733 aa	Known RBP	4.12	□□□□□ -1.75
CSR2	YPR030W	AVT3	P36062	692 aa		4.12	□□□□□ -1.75
CSR2	YPR030W	YOR093C	Q12275	1648 aa		4.12	□□□□□ -1.75
CSR2	YPR030W	MMS1	Q06211	1407 aa		4.12	□□□□□ -1.75
CSR2	YPR030W	CDC25	P04821	1589 aa		4.12	□□□□□ -1.75
CSR2	YPR030W	DNF2	Q12675	1612 aa		4.11	□□□□□ -1.75
CSR2	YPR030W	MDS3	P53094	1487 aa		4.11	□□□□□ -1.75
CSR2	YPR030W	ABP1	P15891	592 aa	Known RBP	4.11	□□□□□ -1.75
CSR2	YPR030W	CFT1	Q06632	1357 aa	Known RBP	4.11	□□□□□ -1.75
CSR2	YPR030W	NTE1	Q04958	1679 aa		4.1	□□□□□ -1.75
CSR2	YPR030W	RTT106	P40161	455 aa		4.09	□□□□□ -1.76
CSR2	YPR030W	RPP0	P05317	312 aa	Known RBP	4.08	□□□□□ -1.76
CSR2	YPR030W	CHC1	P22137	1653 aa	Known RBP	4.08	□□□□□ -1.76
CSR2	YPR030W	EDE1	P34216	1381 aa		4.08	□□□□□ -1.76
CSR2	YPR030W	SNF7	P39929	240 aa	Known RBP	4.08	□□□□□ -1.76
CSR2	YPR030W	SPO14	P36126	1683 aa		4.07	□□□□□ -1.76
CSR2	YPR030W	RLF2	Q12495	606 aa		4.06	□□□□□ -1.76
CSR2	YPR030W	DOP1	Q03921	1698 aa		4.06	□□□□□ -1.76
CSR2	YPR030W	SNF2	P22082	1703 aa		4.06	□□□□□ -1.76
CSR2	YPR030W	NUP157	P40064	1391 aa	Known RBP	4.06	□□□□□ -1.76
CSR2	YPR030W	HAP1	P0CE41	1502 aa		4.05	□□□□□ -1.76
CSR2	YPR030W	QCR6	P00127	147 aa		4.04	□□□□□ -1.76
CSR2	YPR030W	DNF3	Q12674	1656 aa		4.03	□□□□□ -1.76
CSR2	YPR030W	PSD2	P53037	1138 aa	Known RBP	4.03	□□□□□ -1.76
CSR2	YPR030W	RPA190	P10964	1664 aa	Known RBP	4.03	□□□□□ -1.76
CSR2	YPR030W	RPC31	P17890	251 aa		4.02	□□□□□ -1.77
CSR2	YPR030W	NAP1	P25293	417 aa	Known RBP	4.02	□□□□□ -1.77
CSR2	YPR030W	YRB30	P53107	440 aa	Predicted RBP	4.02	□□□□□ -1.77
CSR2	YPR030W	MNN4	P36044	1178 aa		4.02	□□□□□ -1.77
CSR2	YPR030W	EAF7	P53911	425 aa	Known RBP	4.02	□□□□□ -1.77
CSR2	YPR030W	MLP1	Q02455	1875 aa	Known RBP	4.01	□□□□□ -1.77
CSR2	YPR030W	ROX1	P25042	368 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	YRF1-4	O13559	1382 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	YML133C	Q03099	1374 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	YLL067C	Q07888	1374 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	YLL066C	Q99208	1374 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	MET5	P47169	1442 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	NUP192	P47054	1683 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	TRM3	Q07527	1436 aa		4.01	□□□□□ -1.77
CSR2	YPR030W	CDC45	Q08032	650 aa		4	□□□□□ -1.77
CSR2	YPR030W	IML1	P47170	1584 aa		4	□□□□□ -1.77
CSR2	YPR030W	NOT3	P06102	836 aa	Known RBP	3.99	□□□□□ -1.77
CSR2	YPR030W	NOP53	Q12080	455 aa	Known RBP	3.99	□□□□□ -1.77
CSR2	YPR030W	LTE1	P07866	1435 aa		3.98	□□□□□ -1.77
CSR2	YPR030W	VPS27	P40343	622 aa	Known RBP	3.98	□□□□□ -1.77
CSR2	YPR030W	LSP1	Q12230	341 aa	Known RBP	3.98	□□□□□ -1.77
CSR2	YPR030W	YSP2	Q06681	1438 aa		3.98	□□□□□ -1.77
CSR2	YPR030W	IFH1	P39520	1085 aa		3.97	□□□□□ -1.77
CSR2	YPR030W	RAV1	P47104	1357 aa		3.97	□□□□□ -1.77
CSR2	YPR030W	PAF1	P38351	445 aa		3.97	□□□□□ -1.77
CSR2	YPR030W	SLN1	P39928	1220 aa	Predicted RBP	3.96	□□□□□ -1.78
CSR2	YPR030W	YGR130C	P53278	816 aa		3.96	□□□□□ -1.78
CSR2	YPR030W	YFR016C	P43597	1233 aa	Known RBP	3.96	□□□□□ -1.78
CSR2	YPR030W	VMR1	P38735	1592 aa		3.95	□□□□□ -1.78
CSR2	YPR030W	PDR11	P40550	1411 aa		3.95	□□□□□ -1.78
CSR2	YPR030W	RTC1	Q08281	1341 aa		3.95	□□□□□ -1.78

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