RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C TY1B-GR1Q12141 1755 aa12.08□□□□□ -0.48
UME1YPL139C TY1B-BLQ12490 1755 aa12.08□□□□□ -0.48
UME1YPL139C TRM732Q03496 1420 aa12.06□□□□□ -0.48
UME1YPL139C LTE1P07866 1435 aa12.04□□□□□ -0.48
UME1YPL139C YRF1-1P0CX20 1796 aa12.04□□□□□ -0.48
UME1YPL139C YRF1-5P0CX21 1796 aa12.04□□□□□ -0.48
UME1YPL139C YRF1-8P0CX22 1796 aa12.04□□□□□ -0.48
UME1YPL139C NTE1Q04958 1679 aa12.03□□□□□ -0.48
UME1YPL139C BNI1P41832 1953 aa12.03□□□□□ -0.48
UME1YPL139C VTH1P40438 1549 aa12.02□□□□□ -0.48
UME1YPL139C VTH2P40890 1549 aa12.02□□□□□ -0.48
UME1YPL139C TSC11P40061 1430 aa12.01□□□□□ -0.49
UME1YPL139C NUP159P40477 1460 aa11.99□□□□□ -0.49
UME1YPL139C RPO21P04050 1733 aaKnown RBP11.95□□□□□ -0.5
UME1YPL139C GEA2P39993 1459 aaKnown RBP11.92□□□□□ -0.5
UME1YPL139C VPS15P22219 1454 aa11.91□□□□□ -0.5
UME1YPL139C CDC27P38042 758 aa11.91□□□□□ -0.5
UME1YPL139C MYO4P32492 1471 aa11.9□□□□□ -0.5
UME1YPL139C SNQ2P32568 1501 aaKnown RBP11.88□□□□□ -0.51
UME1YPL139C SIS1P25294 352 aaKnown RBP11.88□□□□□ -0.51
UME1YPL139C ITT1Q04638 464 aa11.87□□□□□ -0.51
UME1YPL139C REB1P21538 810 aa11.86□□□□□ -0.51
UME1YPL139C UBP10P53874 792 aaPredicted RBP11.86□□□□□ -0.51
UME1YPL139C DIP2Q12220 943 aaPredicted RBP11.86□□□□□ -0.51
UME1YPL139C YTA7P40340 1379 aa11.82□□□□□ -0.52
UME1YPL139C SNT2P53127 1403 aa11.81□□□□□ -0.52
UME1YPL139C MAP2P38174 421 aaKnown RBP11.76□□□□□ -0.53
UME1YPL139C ULS1Q08562 1619 aa11.76□□□□□ -0.53
UME1YPL139C RPL17AP05740 184 aaKnown RBP11.74□□□□□ -0.53
UME1YPL139C RPL17BP46990 184 aaKnown RBP11.74□□□□□ -0.53
UME1YPL139C SPO14P36126 1683 aa11.74□□□□□ -0.53
UME1YPL139C MMS1Q06211 1407 aa11.73□□□□□ -0.53
UME1YPL139C DRS2P39524 1355 aa11.73□□□□□ -0.53
UME1YPL139C NUP170P38181 1502 aa11.67□□□□□ -0.54
UME1YPL139C PDR12Q02785 1511 aa11.67□□□□□ -0.54
UME1YPL139C MLP2P40457 1679 aa11.67□□□□□ -0.54
UME1YPL139C PDR15Q04182 1529 aaKnown RBP11.66□□□□□ -0.54
UME1YPL139C IRC20Q06554 1556 aa11.66□□□□□ -0.54
UME1YPL139C STH1P32597 1359 aa11.64□□□□□ -0.55
UME1YPL139C GDB1Q06625 1536 aa11.64□□□□□ -0.55
UME1YPL139C DNF2Q12675 1612 aa11.62□□□□□ -0.55
UME1YPL139C MIF2P35201 549 aa11.61□□□□□ -0.55
UME1YPL139C DOP1Q03921 1698 aa11.6□□□□□ -0.55
UME1YPL139C UBP9P39967 754 aa11.59□□□□□ -0.55
UME1YPL139C MET10P39692 1035 aa11.57□□□□□ -0.56
UME1YPL139C NUP157P40064 1391 aaKnown RBP11.53□□□□□ -0.56
UME1YPL139C ABP1P15891 592 aaKnown RBP11.53□□□□□ -0.56
UME1YPL139C IQG1Q12280 1495 aa11.52□□□□□ -0.57
UME1YPL139C SAS10Q12136 610 aaPredicted RBP11.52□□□□□ -0.57
UME1YPL139C RTT106P40161 455 aa11.51□□□□□ -0.57
UME1YPL139C PDR10P51533 1564 aa11.51□□□□□ -0.57
UME1YPL139C TY3B-GQ99315 1547 aa11.5□□□□□ -0.57
UME1YPL139C ARO1P08566 1588 aaKnown RBP11.45□□□□□ -0.58
UME1YPL139C TRM3Q07527 1436 aa11.44□□□□□ -0.58
UME1YPL139C YBT1P32386 1661 aa11.43□□□□□ -0.58
UME1YPL139C YKR023WP36119 530 aaKnown RBP11.42□□□□□ -0.58
UME1YPL139C CHC1P22137 1653 aaKnown RBP11.4□□□□□ -0.58
UME1YPL139C GEA1P47102 1408 aaPredicted RBP11.39□□□□□ -0.59
UME1YPL139C IFH1P39520 1085 aa11.38□□□□□ -0.59
UME1YPL139C BUD3P25558 1636 aa11.37□□□□□ -0.59
UME1YPL139C TIF4632P39936 914 aaKnown RBP11.37□□□□□ -0.59
UME1YPL139C TGL3P40308 642 aa11.36□□□□□ -0.59
UME1YPL139C YOR093CQ12275 1648 aa11.32□□□□□ -0.6
UME1YPL139C CAT8P39113 1433 aa11.31□□□□□ -0.6
UME1YPL139C YFR006WP43590 535 aa11.29□□□□□ -0.6
UME1YPL139C YSP2Q06681 1438 aa11.28□□□□□ -0.6
UME1YPL139C TAF7Q05021 590 aa11.28□□□□□ -0.6
UME1YPL139C SEC7P11075 2009 aaKnown RBP11.21□□□□□ -0.61
UME1YPL139C DNF3Q12674 1656 aa11.21□□□□□ -0.62
UME1YPL139C TFC8Q12308 588 aa11.18□□□□□ -0.62
UME1YPL139C SCY1P53009 804 aa11.17□□□□□ -0.62
UME1YPL139C HOP09932 586 aa11.16□□□□□ -0.62
UME1YPL139C SLX5P32828 619 aaKnown RBP11.16□□□□□ -0.62
UME1YPL139C DCD1P06773 312 aa11.16□□□□□ -0.62
UME1YPL139C CKB1P43639 278 aa11.16□□□□□ -0.62
UME1YPL139C BNR1P40450 1375 aa11.13□□□□□ -0.63
UME1YPL139C SPT21P35209 758 aa11.12□□□□□ -0.63
UME1YPL139C SRB8P25648 1427 aa11.06□□□□□ -0.64
UME1YPL139C VMR1P38735 1592 aa11.01□□□□□ -0.65
UME1YPL139C YAP3P38749 330 aa11.01□□□□□ -0.65
UME1YPL139C IML1P47170 1584 aa10.97□□□□□ -0.65
UME1YPL139C NUP188P52593 1655 aaKnown RBP10.96□□□□□ -0.65
UME1YPL139C USO1P25386 1790 aa10.92□□□□□ -0.66
UME1YPL139C AVT3P36062 692 aa10.9□□□□□ -0.66
UME1YPL139C MAK10Q02197 733 aa10.9□□□□□ -0.66
UME1YPL139C SSM4P40318 1319 aa10.88□□□□□ -0.67
UME1YPL139C TYS1P36421 394 aaKnown RBP10.87□□□□□ -0.67
UME1YPL139C PDR5P33302 1511 aaKnown RBP10.86□□□□□ -0.67
UME1YPL139C BUD21Q08492 214 aaPredicted RBP10.86□□□□□ -0.67
UME1YPL139C IKI3Q06706 1349 aaKnown RBP10.85□□□□□ -0.67
UME1YPL139C IPL1P38991 367 aa10.84□□□□□ -0.67
UME1YPL139C HAP1P0CE41 1502 aa10.84□□□□□ -0.67
UME1YPL139C PDR11P40550 1411 aa10.8□□□□□ -0.68
UME1YPL139C URN1Q06525 465 aaKnown RBP10.78□□□□□ -0.68
UME1YPL139C YBL029C-AQ3E756 94 aa10.77□□□□□ -0.69
UME1YPL139C BCH2P36122 765 aa10.74□□□□□ -0.69
UME1YPL139C GCN2P15442 1659 aa10.72□□□□□ -0.69
UME1YPL139C TY1B-NL2Q99337 1749 aaKnown RBP10.71□□□□□ -0.69
UME1YPL139C THI12P42883 340 aa10.68□□□□□ -0.7
UME1YPL139C THI5P43534 340 aa10.68□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms