RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NCR1YPL006W TY1B-LR1Q12088 1755 aaKnown RBP5.55□□□□□ -1.52
NCR1YPL006W TY1B-NL1Q12112 1755 aa5.55□□□□□ -1.52
NCR1YPL006W TY1B-GR1Q12141 1755 aa5.55□□□□□ -1.52
NCR1YPL006W TY1B-BLQ12490 1755 aa5.55□□□□□ -1.52
NCR1YPL006W CDC25P04821 1589 aa5.54□□□□□ -1.52
NCR1YPL006W YBT1P32386 1661 aa5.53□□□□□ -1.52
NCR1YPL006W VPS15P22219 1454 aa5.53□□□□□ -1.52
NCR1YPL006W ESC1Q03661 1658 aaKnown RBP5.51□□□□□ -1.53
NCR1YPL006W IRC20Q06554 1556 aa5.51□□□□□ -1.53
NCR1YPL006W NOP2P40991 618 aaKnown RBP5.49□□□□□ -1.53
NCR1YPL006W GEA2P39993 1459 aaKnown RBP5.47□□□□□ -1.53
NCR1YPL006W DNF1P32660 1571 aa5.47□□□□□ -1.53
NCR1YPL006W CAT8P39113 1433 aa5.47□□□□□ -1.53
NCR1YPL006W POL5P39985 1022 aaKnown RBP5.47□□□□□ -1.53
NCR1YPL006W RQC2Q12532 1038 aaKnown RBP5.47□□□□□ -1.53
NCR1YPL006W RTT106P40161 455 aa5.46□□□□□ -1.54
NCR1YPL006W RPA190P10964 1664 aaKnown RBP5.45□□□□□ -1.54
NCR1YPL006W RPO21P04050 1733 aaKnown RBP5.45□□□□□ -1.54
NCR1YPL006W NTE1Q04958 1679 aa5.45□□□□□ -1.54
NCR1YPL006W GDB1Q06625 1536 aa5.45□□□□□ -1.54
NCR1YPL006W PDR10P51533 1564 aa5.44□□□□□ -1.54
NCR1YPL006W ENP1P38333 483 aaKnown RBP5.44□□□□□ -1.54
NCR1YPL006W ARO1P08566 1588 aaKnown RBP5.43□□□□□ -1.54
NCR1YPL006W SRB8P25648 1427 aa5.42□□□□□ -1.54
NCR1YPL006W GCN2P15442 1659 aa5.41□□□□□ -1.54
NCR1YPL006W NUP159P40477 1460 aa5.41□□□□□ -1.54
NCR1YPL006W SPT7P35177 1332 aa5.4□□□□□ -1.54
NCR1YPL006W PDR12Q02785 1511 aa5.39□□□□□ -1.55
NCR1YPL006W SEC3P33332 1336 aaKnown RBP5.39□□□□□ -1.55
NCR1YPL006W PDR5P33302 1511 aaKnown RBP5.38□□□□□ -1.55
NCR1YPL006W SPO14P36126 1683 aa5.36□□□□□ -1.55
NCR1YPL006W YSP2Q06681 1438 aa5.35□□□□□ -1.55
NCR1YPL006W YRF1-1P0CX20 1796 aa5.34□□□□□ -1.55
NCR1YPL006W YRF1-5P0CX21 1796 aa5.34□□□□□ -1.55
NCR1YPL006W YRF1-8P0CX22 1796 aa5.34□□□□□ -1.55
NCR1YPL006W BUD3P25558 1636 aa5.34□□□□□ -1.55
NCR1YPL006W IQG1Q12280 1495 aa5.34□□□□□ -1.56
NCR1YPL006W CKB1P43639 278 aa5.34□□□□□ -1.56
NCR1YPL006W MET10P39692 1035 aa5.33□□□□□ -1.56
NCR1YPL006W NUP157P40064 1391 aaKnown RBP5.33□□□□□ -1.56
NCR1YPL006W MMS1Q06211 1407 aa5.32□□□□□ -1.56
NCR1YPL006W PRS1P32895 427 aaKnown RBP5.32□□□□□ -1.56
NCR1YPL006W BUD21Q08492 214 aaPredicted RBP5.31□□□□□ -1.56
NCR1YPL006W YLR419WQ06698 1435 aaKnown RBP5.31□□□□□ -1.56
NCR1YPL006W YOR093CQ12275 1648 aa5.3□□□□□ -1.56
NCR1YPL006W MHP1P43638 1398 aa5.29□□□□□ -1.56
NCR1YPL006W NOP7P53261 605 aaKnown RBP5.29□□□□□ -1.56
NCR1YPL006W TY3B-IQ7LHG5 1498 aaKnown RBP5.29□□□□□ -1.56
NCR1YPL006W PSD2P53037 1138 aaKnown RBP5.28□□□□□ -1.56
NCR1YPL006W LTE1P07866 1435 aa5.28□□□□□ -1.56
NCR1YPL006W CHC1P22137 1653 aaKnown RBP5.26□□□□□ -1.57
NCR1YPL006W SEC7P11075 2009 aaKnown RBP5.25□□□□□ -1.57
NCR1YPL006W MET5P47169 1442 aa5.25□□□□□ -1.57
NCR1YPL006W BFR2Q06631 534 aaKnown RBP5.25□□□□□ -1.57
NCR1YPL006W PDR11P40550 1411 aa5.25□□□□□ -1.57
NCR1YPL006W RAV1P47104 1357 aa5.24□□□□□ -1.57
NCR1YPL006W LEU3P08638 886 aa5.23□□□□□ -1.57
NCR1YPL006W BNR1P40450 1375 aa5.23□□□□□ -1.57
NCR1YPL006W ORC1P54784 914 aaPredicted RBP5.23□□□□□ -1.57
NCR1YPL006W RTC1Q08281 1341 aa5.22□□□□□ -1.57
NCR1YPL006W PAF1P38351 445 aa5.22□□□□□ -1.57
NCR1YPL006W VMR1P38735 1592 aa5.22□□□□□ -1.57
NCR1YPL006W NST1P53935 1240 aa5.2□□□□□ -1.58
NCR1YPL006W NUP192P47054 1683 aa5.2□□□□□ -1.58
NCR1YPL006W PDS5Q04264 1277 aa5.19□□□□□ -1.58
NCR1YPL006W DRS2P39524 1355 aa5.19□□□□□ -1.58
NCR1YPL006W MTC1P47018 478 aaKnown RBP5.18□□□□□ -1.58
NCR1YPL006W DOP1Q03921 1698 aa5.18□□□□□ -1.58
NCR1YPL006W NUP188P52593 1655 aaKnown RBP5.17□□□□□ -1.58
NCR1YPL006W TAF5P38129 798 aa5.17□□□□□ -1.58
NCR1YPL006W CFT1Q06632 1357 aaKnown RBP5.17□□□□□ -1.58
NCR1YPL006W IML1P47170 1584 aa5.16□□□□□ -1.58
NCR1YPL006W KIP3P53086 805 aaKnown RBP5.15□□□□□ -1.58
NCR1YPL006W TFA1P36100 482 aa5.15□□□□□ -1.58
NCR1YPL006W ESL2P36168 1195 aa5.15□□□□□ -1.59
NCR1YPL006W DNF2Q12675 1612 aa5.13□□□□□ -1.59
NCR1YPL006W TRM3Q07527 1436 aa5.12□□□□□ -1.59
NCR1YPL006W SPE2P21182 396 aa5.1□□□□□ -1.59
NCR1YPL006W YAP3P38749 330 aa5.1□□□□□ -1.59
NCR1YPL006W RPP0P05317 312 aaKnown RBP5.09□□□□□ -1.59
NCR1YPL006W IOC4Q04213 475 aa5.09□□□□□ -1.59
NCR1YPL006W FUN12P39730 1002 aaKnown RBP5.09□□□□□ -1.6
NCR1YPL006W RTG3P38165 486 aa5.08□□□□□ -1.6
NCR1YPL006W VPS27P40343 622 aaKnown RBP5.08□□□□□ -1.6
NCR1YPL006W MLP1Q02455 1875 aaKnown RBP5.08□□□□□ -1.6
NCR1YPL006W CDC45Q08032 650 aa5.08□□□□□ -1.6
NCR1YPL006W FKH1P40466 484 aa5.07□□□□□ -1.6
NCR1YPL006W RVB2Q12464 471 aaKnown RBP5.07□□□□□ -1.6
NCR1YPL006W BCK1Q01389 1478 aa5.07□□□□□ -1.6
NCR1YPL006W YEF3P16521 1044 aaKnown RBP5.07□□□□□ -1.6
NCR1YPL006W TYS1P36421 394 aaKnown RBP5.07□□□□□ -1.6
NCR1YPL006W RAD9P14737 1309 aa5.06□□□□□ -1.6
NCR1YPL006W TRK1P12685 1235 aa5.06□□□□□ -1.6
NCR1YPL006W SCT1P32784 759 aa5.06□□□□□ -1.6
NCR1YPL006W IPL1P38991 367 aa5.06□□□□□ -1.6
NCR1YPL006W YML133CQ03099 1374 aa5.05□□□□□ -1.6
NCR1YPL006W YLL067CQ07888 1374 aa5.05□□□□□ -1.6
NCR1YPL006W YLL066CQ99208 1374 aa5.05□□□□□ -1.6
NCR1YPL006W ALD4P46367 519 aaKnown RBP5.05□□□□□ -1.6
NCR1YPL006W TAF8Q03750 510 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms