RNA–Protein interactions for RNA: YOR303W

CPA1, Transcript of Small subunit of carbamoyl phosphate synthetase, yeastyeast

Gene CPA1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPA1YOR303W YEL023CP39992 682 aa9.03□□□□□ -0.96
CPA1YOR303W PTC4P38089 393 aa9.02□□□□□ -0.97
CPA1YOR303W CHL1P22516 861 aaPredicted RBP9□□□□□ -0.97
CPA1YOR303W BCK2P33306 851 aa8.98□□□□□ -0.97
CPA1YOR303W PRE3P38624 215 aa8.97□□□□□ -0.97
CPA1YOR303W YDR344CQ05510 147 aa8.96□□□□□ -0.98
CPA1YOR303W GRE2Q12068 342 aaKnown RBP8.92□□□□□ -0.98
CPA1YOR303W RQC2Q12532 1038 aaKnown RBP8.92□□□□□ -0.98
CPA1YOR303W EDS1P38073 919 aa8.9□□□□□ -0.98
CPA1YOR303W RAM2P29703 316 aa8.88□□□□□ -0.99
CPA1YOR303W PML39Q03760 334 aa8.88□□□□□ -0.99
CPA1YOR303W MIF2P35201 549 aa8.87□□□□□ -0.99
CPA1YOR303W MAK11P20484 414 aaKnown RBP8.85□□□□□ -0.99
CPA1YOR303W PTC3P34221 468 aaKnown RBP8.84□□□□□ -0.99
CPA1YOR303W NST1P53935 1240 aa8.83□□□□□ -1
CPA1YOR303W GUT1P32190 709 aa8.81□□□□□ -1
CPA1YOR303W ATH1P48016 1211 aa8.81□□□□□ -1
CPA1YOR303W VRP1P37370 817 aa8.8□□□□□ -1
CPA1YOR303W SOL3P38858 249 aa8.79□□□□□ -1
CPA1YOR303W MID1P41821 548 aa8.78□□□□□ -1
CPA1YOR303W ELP4Q02884 456 aaKnown RBP8.78□□□□□ -1
CPA1YOR303W XDJ1P39102 459 aa8.76□□□□□ -1.01
CPA1YOR303W COQ8P27697 501 aa8.75□□□□□ -1.01
CPA1YOR303W ARH1P48360 493 aa8.73□□□□□ -1.01
CPA1YOR303W ILV3P39522 585 aaKnown RBP8.7□□□□□ -1.02
CPA1YOR303W MPH3P0CE00 602 aa8.68□□□□□ -1.02
CPA1YOR303W AI4P03878 556 aa8.66□□□□□ -1.02
CPA1YOR303W PEX29Q03370 554 aa8.62□□□□□ -1.03
CPA1YOR303W SPT23P35210 1082 aa8.61□□□□□ -1.03
CPA1YOR303W DPS1P04802 557 aaKnown RBP8.6□□□□□ -1.03
CPA1YOR303W YGR273CP53329 174 aa8.58□□□□□ -1.04
CPA1YOR303W HAP5Q02516 242 aa8.57□□□□□ -1.04
CPA1YOR303W MPC54Q08550 464 aa8.54□□□□□ -1.04
CPA1YOR303W BNI4P53858 892 aa8.53□□□□□ -1.04
CPA1YOR303W NOP53Q12080 455 aaKnown RBP8.52□□□□□ -1.05
CPA1YOR303W YML082WQ04533 649 aaKnown RBP8.49□□□□□ -1.05
CPA1YOR303W SLI15P38283 698 aa8.48□□□□□ -1.05
CPA1YOR303W NMA111P53920 997 aa8.48□□□□□ -1.05
CPA1YOR303W SRC1Q03707 834 aa8.48□□□□□ -1.05
CPA1YOR303W PTC2P39966 464 aaKnown RBP8.47□□□□□ -1.05
CPA1YOR303W DPL1Q05567 589 aa8.42□□□□□ -1.06
CPA1YOR303W YPR015CQ12531 247 aa8.41□□□□□ -1.06
CPA1YOR303W RGA2Q06407 1009 aa8.4□□□□□ -1.06
CPA1YOR303W KEX1P09620 729 aa8.37□□□□□ -1.07
CPA1YOR303W RAM1P22007 431 aa8.36□□□□□ -1.07
CPA1YOR303W RAS1P01119 309 aa8.34□□□□□ -1.07
CPA1YOR303W CDC73Q06697 393 aa8.33□□□□□ -1.08
CPA1YOR303W ISU2Q12056 156 aa8.31□□□□□ -1.08
CPA1YOR303W UBP14P38237 781 aaKnown RBP8.29□□□□□ -1.08
CPA1YOR303W YLR326WQ06170 240 aaKnown RBP8.29□□□□□ -1.08
CPA1YOR303W PDR1P12383 1068 aa8.26□□□□□ -1.09
CPA1YOR303W SET1P38827 1080 aaKnown RBP8.26□□□□□ -1.09
CPA1YOR303W VHR2P40041 505 aa8.25□□□□□ -1.09
CPA1YOR303W PCS60P38137 543 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09 RIP-Chip
CPA1YOR303W SDH2P21801 266 aa8.22□□□□□ -1.09
CPA1YOR303W GYP1Q08484 637 aa8.2□□□□□ -1.1
CPA1YOR303W AMS1P22855 1083 aa8.17□□□□□ -1.1
CPA1YOR303W RAD54P32863 898 aa8.16□□□□□ -1.1
CPA1YOR303W RGA1P39083 1007 aa8.16□□□□□ -1.1
CPA1YOR303W YDR090CQ03193 310 aa8.12□□□□□ -1.11
CPA1YOR303W TRK1P12685 1235 aa8.1□□□□□ -1.11
CPA1YOR303W SAS4Q04003 481 aa8.1□□□□□ -1.11
CPA1YOR303W BUD20Q08004 166 aaPredicted RBP8.08□□□□□ -1.12
CPA1YOR303W TAF7Q05021 590 aa8.05□□□□□ -1.12
CPA1YOR303W YRR1Q12172 810 aa8.05□□□□□ -1.12
CPA1YOR303W GAP1P19145 602 aaPredicted RBP8.04□□□□□ -1.12
CPA1YOR303W RPP1BP10622 106 aaKnown RBP8.03□□□□□ -1.12
CPA1YOR303W STR2P47164 639 aa8.03□□□□□ -1.12
CPA1YOR303W ISM1P48526 1002 aa8.01□□□□□ -1.13
CPA1YOR303W PRT1P06103 763 aaKnown RBP8□□□□□ -1.13
CPA1YOR303W YEL077CQ3E7X8 1277 aa8□□□□□ -1.13
CPA1YOR303W KIC1P38692 1080 aa7.97□□□□□ -1.13
CPA1YOR303W NOP2P40991 618 aaKnown RBP7.97□□□□□ -1.13
CPA1YOR303W PEX21P50091 288 aa7.97□□□□□ -1.13
CPA1YOR303W MRF1P30775 413 aaPredicted RBP7.96□□□□□ -1.14
CPA1YOR303W TUM1Q08686 304 aaKnown RBP7.96□□□□□ -1.14
CPA1YOR303W NUD1P32336 851 aa7.95□□□□□ -1.14
CPA1YOR303W CSC1Q06538 782 aa7.95□□□□□ -1.14
CPA1YOR303W CAB3P36076 571 aa7.94□□□□□ -1.14
CPA1YOR303W IFH1P39520 1085 aa7.94□□□□□ -1.14
CPA1YOR303W TFB4Q12004 338 aa7.94□□□□□ -1.14
CPA1YOR303W ORC6P38826 435 aa7.93□□□□□ -1.14
CPA1YOR303W REF2P42073 533 aaPredicted RBP7.93□□□□□ -1.14
CPA1YOR303W YPR148CQ06523 435 aa7.93□□□□□ -1.14
CPA1YOR303W TY1A-DR4O74302 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-HP0C2I4 478 aaKnown RBP7.91□□□□□ -1.14
CPA1YOR303W TY1A-AP0CX57 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-PR1P0CX58 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-ORP0CX59 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-PR2P0CX60 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-DR5P0CX65 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-ER2P0CX66 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-GR3P0CX67 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-LR1P0CX68 440 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-MR2P0CX69 440 aa7.91□□□□□ -1.14
CPA1YOR303W AIR1P40507 360 aaKnown RBP7.91□□□□□ -1.14
CPA1YOR303W CST6P40535 587 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-JR2P47099 440 aa7.91□□□□□ -1.14
CPA1YOR303W CLA4P48562 842 aa7.91□□□□□ -1.14
CPA1YOR303W TY1A-DR1Q03856 440 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 141.8 ms