RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeastyeast

Gene SFM1, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFM1YOR021C YDL129WQ07555 291 aa7.84□□□□□ -1.15
SFM1YOR021C RAM2P29703 316 aa7.83□□□□□ -1.16
SFM1YOR021C PTC4P38089 393 aa7.82□□□□□ -1.16
SFM1YOR021C EDS1P38073 919 aa7.81□□□□□ -1.16
SFM1YOR021C MIF2P35201 549 aa7.8□□□□□ -1.16
SFM1YOR021C YDR344CQ05510 147 aa7.79□□□□□ -1.16
SFM1YOR021C GRE2Q12068 342 aaKnown RBP7.79□□□□□ -1.16
SFM1YOR021C MAK11P20484 414 aaKnown RBP7.77□□□□□ -1.17
SFM1YOR021C CHL1P22516 861 aaPredicted RBP7.75□□□□□ -1.17
SFM1YOR021C PTC3P34221 468 aaKnown RBP7.75□□□□□ -1.17
SFM1YOR021C PRE3P38624 215 aa7.74□□□□□ -1.17
SFM1YOR021C BCK2P33306 851 aa7.73□□□□□ -1.17
SFM1YOR021C PML39Q03760 334 aa7.72□□□□□ -1.17
SFM1YOR021C ATH1P48016 1211 aa7.71□□□□□ -1.18
SFM1YOR021C COQ8P27697 501 aa7.69□□□□□ -1.18
SFM1YOR021C GUT1P32190 709 aa7.69□□□□□ -1.18
SFM1YOR021C NST1P53935 1240 aa7.69□□□□□ -1.18
SFM1YOR021C SOL3P38858 249 aa7.67□□□□□ -1.18
SFM1YOR021C MID1P41821 548 aa7.66□□□□□ -1.18
SFM1YOR021C ELP4Q02884 456 aaKnown RBP7.62□□□□□ -1.19
SFM1YOR021C ILV3P39522 585 aaKnown RBP7.61□□□□□ -1.19
SFM1YOR021C VRP1P37370 817 aa7.6□□□□□ -1.19
SFM1YOR021C MPH3P0CE00 602 aa7.56□□□□□ -1.2
SFM1YOR021C ARH1P48360 493 aa7.55□□□□□ -1.2
SFM1YOR021C AI4P03878 556 aa7.54□□□□□ -1.2
SFM1YOR021C XDJ1P39102 459 aa7.53□□□□□ -1.2
SFM1YOR021C PEX29Q03370 554 aa7.52□□□□□ -1.21
SFM1YOR021C YGR273CP53329 174 aa7.51□□□□□ -1.21
SFM1YOR021C MPC54Q08550 464 aa7.46□□□□□ -1.22
SFM1YOR021C SPT23P35210 1082 aa7.45□□□□□ -1.22
SFM1YOR021C HAP5Q02516 242 aa7.45□□□□□ -1.22
SFM1YOR021C NOP53Q12080 455 aaKnown RBP7.45□□□□□ -1.22
SFM1YOR021C SLI15P38283 698 aa7.42□□□□□ -1.22
SFM1YOR021C DPS1P04802 557 aaKnown RBP7.41□□□□□ -1.22
SFM1YOR021C BNI4P53858 892 aa7.4□□□□□ -1.22
SFM1YOR021C NMA111P53920 997 aa7.38□□□□□ -1.23
SFM1YOR021C PTC2P39966 464 aaKnown RBP7.36□□□□□ -1.23
SFM1YOR021C KEX1P09620 729 aa7.35□□□□□ -1.23
SFM1YOR021C YML082WQ04533 649 aaKnown RBP7.34□□□□□ -1.23
SFM1YOR021C DPL1Q05567 589 aa7.34□□□□□ -1.23
SFM1YOR021C YPR015CQ12531 247 aa7.33□□□□□ -1.24
SFM1YOR021C SET1P38827 1080 aaKnown RBP7.32□□□□□ -1.24
SFM1YOR021C CDC73Q06697 393 aa7.3□□□□□ -1.24
SFM1YOR021C SRC1Q03707 834 aa7.29□□□□□ -1.24
SFM1YOR021C YLR326WQ06170 240 aaKnown RBP7.29□□□□□ -1.24
SFM1YOR021C UBP14P38237 781 aaKnown RBP7.28□□□□□ -1.24
SFM1YOR021C VHR2P40041 505 aa7.28□□□□□ -1.24
SFM1YOR021C RAM1P22007 431 aa7.27□□□□□ -1.25
SFM1YOR021C ISU2Q12056 156 aa7.24□□□□□ -1.25
SFM1YOR021C PCS60P38137 543 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
SFM1YOR021C RAS1P01119 309 aa7.22□□□□□ -1.25
SFM1YOR021C PDR1P12383 1068 aa7.22□□□□□ -1.25
SFM1YOR021C RAD54P32863 898 aa7.18□□□□□ -1.26
SFM1YOR021C YDR090CQ03193 310 aa7.15□□□□□ -1.26
SFM1YOR021C GYP1Q08484 637 aa7.14□□□□□ -1.27
SFM1YOR021C SDH2P21801 266 aa7.13□□□□□ -1.27
SFM1YOR021C AMS1P22855 1083 aa7.07□□□□□ -1.28
SFM1YOR021C YRR1Q12172 810 aa7.06□□□□□ -1.28
SFM1YOR021C BUD20Q08004 166 aaPredicted RBP7.05□□□□□ -1.28
SFM1YOR021C RPP1BP10622 106 aaKnown RBP7.04□□□□□ -1.28
SFM1YOR021C KIC1P38692 1080 aa7.04□□□□□ -1.28
SFM1YOR021C GAP1P19145 602 aaPredicted RBP7.03□□□□□ -1.28
SFM1YOR021C STR2P47164 639 aa7.03□□□□□ -1.28
SFM1YOR021C YPR148CQ06523 435 aa7.03□□□□□ -1.28
SFM1YOR021C IFH1P39520 1085 aa7.02□□□□□ -1.29
SFM1YOR021C SAS4Q04003 481 aa7.02□□□□□ -1.29
SFM1YOR021C REF2P42073 533 aaPredicted RBP7.01□□□□□ -1.29
SFM1YOR021C ISM1P48526 1002 aa7.01□□□□□ -1.29
SFM1YOR021C PEX21P50091 288 aa7□□□□□ -1.29
SFM1YOR021C TUM1Q08686 304 aaKnown RBP7□□□□□ -1.29
SFM1YOR021C TRK1P12685 1235 aa6.99□□□□□ -1.29
SFM1YOR021C ORC6P38826 435 aa6.98□□□□□ -1.29
SFM1YOR021C PRT1P06103 763 aaKnown RBP6.97□□□□□ -1.29
SFM1YOR021C NUD1P32336 851 aa6.97□□□□□ -1.29
SFM1YOR021C VPS70P47161 811 aa6.97□□□□□ -1.29
SFM1YOR021C CSC1Q06538 782 aa6.97□□□□□ -1.29
SFM1YOR021C TFB4Q12004 338 aa6.96□□□□□ -1.3
SFM1YOR021C YEL077CQ3E7X8 1277 aa6.95□□□□□ -1.3
SFM1YOR021C TY1A-DR4O74302 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-HP0C2I4 478 aaKnown RBP6.92□□□□□ -1.3
SFM1YOR021C TY1A-AP0CX57 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-PR1P0CX58 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-ORP0CX59 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-PR2P0CX60 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-DR5P0CX65 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-ER2P0CX66 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-GR3P0CX67 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-LR1P0CX68 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-MR2P0CX69 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-JR2P47099 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-DR1Q03856 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-ML1Q04706 440 aaKnown RBP6.92□□□□□ -1.3
SFM1YOR021C TY1A-BRQ12217 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-NL2Q12470 440 aa6.92□□□□□ -1.3
SFM1YOR021C TY1A-GR2Q12485 440 aa6.92□□□□□ -1.3
SFM1YOR021C SEC2P17065 759 aa6.91□□□□□ -1.3
SFM1YOR021C MRF1P30775 413 aaPredicted RBP6.91□□□□□ -1.3
SFM1YOR021C RGA1P39083 1007 aa6.91□□□□□ -1.3
SFM1YOR021C COX6P00427 148 aa6.9□□□□□ -1.3
SFM1YOR021C CST6P40535 587 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms