RNA–Protein interactions for RNA: YMR172W

HOT1, Transcript of Transcription factor for glycerol biosynthetic genes, yeastyeast

Gene HOT1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOT1YMR172W XRN1P22147 1528 aaKnown RBP5.48□□□□□ -1.53
HOT1YMR172W TOP2P06786 1428 aaKnown RBP5.48□□□□□ -1.53
HOT1YMR172W SWE1P32944 819 aa5.48□□□□□ -1.53
HOT1YMR172W ROX1P25042 368 aa5.48□□□□□ -1.53
HOT1YMR172W TLG1Q03322 224 aa5.48□□□□□ -1.53
HOT1YMR172W HIF1Q12373 385 aa5.48□□□□□ -1.53
HOT1YMR172W TIF4632P39936 914 aaKnown RBP5.47□□□□□ -1.53
HOT1YMR172W SIC1P38634 284 aa5.46□□□□□ -1.53
HOT1YMR172W RPN7Q06103 429 aaKnown RBP5.46□□□□□ -1.53
HOT1YMR172W TOA1P32773 286 aa5.46□□□□□ -1.54
HOT1YMR172W BYE1P36106 594 aa5.46□□□□□ -1.54
HOT1YMR172W DSN1P40568 576 aa5.46□□□□□ -1.54
HOT1YMR172W MON2P48563 1636 aaPredicted RBP5.45□□□□□ -1.54
HOT1YMR172W ECM16Q04217 1267 aaKnown RBP5.44□□□□□ -1.54
HOT1YMR172W NOP8Q08287 484 aaPredicted RBP5.44□□□□□ -1.54
HOT1YMR172W NHA1Q99271 985 aa5.44□□□□□ -1.54
HOT1YMR172W MMS1Q06211 1407 aa5.44□□□□□ -1.54
HOT1YMR172W SLN1P39928 1220 aaPredicted RBP5.43□□□□□ -1.54
HOT1YMR172W PET111P08468 800 aa5.43□□□□□ -1.54
HOT1YMR172W SSA1P10591 642 aaKnown RBP5.43□□□□□ -1.54
HOT1YMR172W SSA2P10592 639 aaKnown RBP5.43□□□□□ -1.54
HOT1YMR172W YPP1P46951 817 aa5.43□□□□□ -1.54
HOT1YMR172W SUB1P54000 292 aaKnown RBP5.42□□□□□ -1.54
HOT1YMR172W RRP14P36080 434 aaKnown RBP5.42□□□□□ -1.54
HOT1YMR172W PEP1P32319 1579 aa5.41□□□□□ -1.54
HOT1YMR172W SRB8P25648 1427 aa5.41□□□□□ -1.54
HOT1YMR172W BUD4P47136 1447 aa5.41□□□□□ -1.54
HOT1YMR172W CLB5P30283 435 aa5.41□□□□□ -1.54
HOT1YMR172W IKI3Q06706 1349 aaKnown RBP5.41□□□□□ -1.54
HOT1YMR172W SPT16P32558 1035 aaKnown RBP5.4□□□□□ -1.54
HOT1YMR172W NOT3P06102 836 aaKnown RBP5.4□□□□□ -1.55
HOT1YMR172W GIN4Q12263 1142 aa5.4□□□□□ -1.55
HOT1YMR172W MYO4P32492 1471 aa5.4□□□□□ -1.55
HOT1YMR172W LEU3P08638 886 aa5.39□□□□□ -1.55
HOT1YMR172W SRP54P20424 541 aaKnown RBP5.39□□□□□ -1.55
HOT1YMR172W TRM732Q03496 1420 aa5.39□□□□□ -1.55
HOT1YMR172W SAP190P36123 1033 aa5.39□□□□□ -1.55
HOT1YMR172W YIR014WP40570 242 aa5.39□□□□□ -1.55
HOT1YMR172W APL5Q08951 932 aaKnown RBP5.39□□□□□ -1.55
HOT1YMR172W CHZ1P40019 153 aaPredicted RBP5.38□□□□□ -1.55
HOT1YMR172W RRP15Q06511 250 aaPredicted RBP5.38□□□□□ -1.55
HOT1YMR172W EDE1P34216 1381 aa5.38□□□□□ -1.55
HOT1YMR172W MED8P38304 223 aa5.38□□□□□ -1.55
HOT1YMR172W CDC11P32458 415 aa5.37□□□□□ -1.55
HOT1YMR172W SWI3P32591 825 aa5.37□□□□□ -1.55
HOT1YMR172W PEA2P40091 420 aa5.37□□□□□ -1.55
HOT1YMR172W ORC1P54784 914 aaPredicted RBP5.37□□□□□ -1.55
HOT1YMR172W BMS1Q08965 1183 aaKnown RBP5.37□□□□□ -1.55
HOT1YMR172W YVC1Q12324 675 aa5.37□□□□□ -1.55
HOT1YMR172W DEP1P31385 405 aa5.36□□□□□ -1.55
HOT1YMR172W YMR124WP39523 943 aaKnown RBP5.36□□□□□ -1.55
HOT1YMR172W ECM1P39715 212 aa5.36□□□□□ -1.55
HOT1YMR172W DJP1P40564 432 aa5.36□□□□□ -1.55
HOT1YMR172W PAP2P53632 584 aaKnown RBP5.36□□□□□ -1.55
HOT1YMR172W HSC82P15108 705 aaKnown RBP5.36□□□□□ -1.55
HOT1YMR172W RAD51P25454 400 aa5.36□□□□□ -1.55
HOT1YMR172W YLL054CQ12244 843 aa5.36□□□□□ -1.55
HOT1YMR172W YLR419WQ06698 1435 aaKnown RBP5.36□□□□□ -1.55
HOT1YMR172W CLB1P24868 471 aa5.35□□□□□ -1.55
HOT1YMR172W RSC8P43609 557 aaKnown RBP5.35□□□□□ -1.55
HOT1YMR172W TPM2P40414 161 aa5.35□□□□□ -1.55
HOT1YMR172W PRY3P47033 881 aa5.35□□□□□ -1.55
HOT1YMR172W MPP10P47083 593 aaKnown RBP5.35□□□□□ -1.55
HOT1YMR172W ERV41Q04651 352 aa5.35□□□□□ -1.55
HOT1YMR172W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
HOT1YMR172W NAB3P38996 802 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
HOT1YMR172W RNT1Q02555 471 aa5.34□□□□□ -1.55
HOT1YMR172W RTT106P40161 455 aa5.33□□□□□ -1.56
HOT1YMR172W ALD3P54114 506 aa5.33□□□□□ -1.56
HOT1YMR172W VPS30Q02948 557 aa5.33□□□□□ -1.56
HOT1YMR172W VPS60Q03390 229 aa5.33□□□□□ -1.56
HOT1YMR172W PDR10P51533 1564 aa5.33□□□□□ -1.56
HOT1YMR172W ABP1P15891 592 aaKnown RBP5.33□□□□□ -1.56
HOT1YMR172W RPC82P32349 654 aa5.33□□□□□ -1.56
HOT1YMR172W YPK9Q12697 1472 aa5.33□□□□□ -1.56
HOT1YMR172W VPS24P36095 224 aaKnown RBP5.32□□□□□ -1.56
HOT1YMR172W TCD1P38756 429 aa5.32□□□□□ -1.56
HOT1YMR172W SEC9P40357 651 aa5.32□□□□□ -1.56
HOT1YMR172W VID30P53076 958 aa5.32□□□□□ -1.56
HOT1YMR172W MDM38Q08179 573 aa5.32□□□□□ -1.56
HOT1YMR172W THO2P53552 1597 aaKnown RBP5.32□□□□□ -1.56
HOT1YMR172W SMC4Q12267 1418 aa5.32□□□□□ -1.56
HOT1YMR172W TY1B-AO13527 1196 aaKnown RBP5.32□□□□□ -1.56
HOT1YMR172W MCM1P11746 286 aa5.32□□□□□ -1.56
HOT1YMR172W SUP35P05453 685 aaKnown RBP5.31□□□□□ -1.56
HOT1YMR172W PCT1P13259 424 aa5.31□□□□□ -1.56
HOT1YMR172W MSP1P28737 362 aa5.31□□□□□ -1.56
HOT1YMR172W ARL1P38116 183 aaKnown RBP5.31□□□□□ -1.56
HOT1YMR172W CIN4P39110 191 aa5.31□□□□□ -1.56
HOT1YMR172W RAD2P07276 1031 aa5.31□□□□□ -1.56
HOT1YMR172W LEM3P42838 414 aa5.31□□□□□ -1.56
HOT1YMR172W RSC1P53236 928 aa5.31□□□□□ -1.56
HOT1YMR172W VPS72Q03388 795 aa5.31□□□□□ -1.56
HOT1YMR172W ZUO1P32527 433 aaKnown RBP5.3□□□□□ -1.56
HOT1YMR172W DMA1P38823 416 aa5.3□□□□□ -1.56
HOT1YMR172W BDP1P46678 594 aa5.3□□□□□ -1.56
HOT1YMR172W ITC1P53125 1264 aa5.3□□□□□ -1.56
HOT1YMR172W NOP14Q99207 810 aaKnown RBP5.3□□□□□ -1.56
HOT1YMR172W TY4B-PA0A0B7P3V8 1104 aa5.29□□□□□ -1.56
HOT1YMR172W KAR3P17119 729 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms