RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W DCW1P36091 449 aa6.22□□□□□ -1.41
PRP39YML046W PTC4P38089 393 aa6.22□□□□□ -1.41
PRP39YML046W YEL023CP39992 682 aa6.22□□□□□ -1.41
PRP39YML046W XDJ1P39102 459 aa6.21□□□□□ -1.42
PRP39YML046W VRP1P37370 817 aa6.19□□□□□ -1.42
PRP39YML046W MGA2P40578 1113 aa6.18□□□□□ -1.42
PRP39YML046W RCR1P38212 213 aa6.15□□□□□ -1.42
PRP39YML046W DPS1P04802 557 aaKnown RBP6.13□□□□□ -1.43
PRP39YML046W ELP4Q02884 456 aaKnown RBP6.13□□□□□ -1.43
PRP39YML046W YDR344CQ05510 147 aa6.11□□□□□ -1.43
PRP39YML046W PML39Q03760 334 aa6.1□□□□□ -1.43
PRP39YML046W GRE2Q12068 342 aaKnown RBP6.06□□□□□ -1.44
PRP39YML046W RGA2Q06407 1009 aa6.05□□□□□ -1.44
PRP39YML046W ARH1P48360 493 aa6.04□□□□□ -1.44
PRP39YML046W SPT23P35210 1082 aa5.98□□□□□ -1.45
PRP39YML046W ATH1P48016 1211 aa5.98□□□□□ -1.45
PRP39YML046W MID1P41821 548 aa5.97□□□□□ -1.45
PRP39YML046W PEX29Q03370 554 aa5.97□□□□□ -1.45
PRP39YML046W SRC1Q03707 834 aa5.97□□□□□ -1.45
PRP39YML046W GUT1P32190 709 aa5.96□□□□□ -1.46
PRP39YML046W RGA1P39083 1007 aa5.95□□□□□ -1.46
PRP39YML046W MIF2P35201 549 aa5.94□□□□□ -1.46
PRP39YML046W PTC3P34221 468 aaKnown RBP5.92□□□□□ -1.46
PRP39YML046W HAP5Q02516 242 aa5.91□□□□□ -1.46
PRP39YML046W NST1P53935 1240 aa5.9□□□□□ -1.46
PRP39YML046W BNI4P53858 892 aa5.89□□□□□ -1.47
PRP39YML046W EDS1P38073 919 aa5.88□□□□□ -1.47
PRP39YML046W MAK11P20484 414 aaKnown RBP5.88□□□□□ -1.47
PRP39YML046W PTC2P39966 464 aaKnown RBP5.88□□□□□ -1.47
PRP39YML046W AI4P03878 556 aa5.87□□□□□ -1.47
PRP39YML046W YML082WQ04533 649 aaKnown RBP5.87□□□□□ -1.47
PRP39YML046W MPH3P0CE00 602 aa5.86□□□□□ -1.47
PRP39YML046W SOL3P38858 249 aa5.84□□□□□ -1.47
PRP39YML046W ILV3P39522 585 aaKnown RBP5.81□□□□□ -1.48
PRP39YML046W MPC54Q08550 464 aa5.8□□□□□ -1.48
PRP39YML046W COQ8P27697 501 aa5.79□□□□□ -1.48
PRP39YML046W RAM2P29703 316 aa5.79□□□□□ -1.48
PRP39YML046W RAS1P01119 309 aa5.78□□□□□ -1.48
PRP39YML046W NMA111P53920 997 aa5.76□□□□□ -1.49
PRP39YML046W YGR273CP53329 174 aa5.73□□□□□ -1.49
PRP39YML046W TRK1P12685 1235 aa5.73□□□□□ -1.49
PRP39YML046W DPL1Q05567 589 aa5.71□□□□□ -1.5
PRP39YML046W YPR015CQ12531 247 aa5.7□□□□□ -1.5
PRP39YML046W AMS1P22855 1083 aa5.69□□□□□ -1.5
PRP39YML046W SLI15P38283 698 aa5.69□□□□□ -1.5
PRP39YML046W GYP1Q08484 637 aa5.68□□□□□ -1.5
PRP39YML046W NOP53Q12080 455 aaKnown RBP5.66□□□□□ -1.5
PRP39YML046W RAM1P22007 431 aa5.65□□□□□ -1.5
PRP39YML046W ISU2Q12056 156 aa5.64□□□□□ -1.51
PRP39YML046W YPL062WQ02781 134 aa5.61□□□□□ -1.51
PRP39YML046W SAS4Q04003 481 aa5.6□□□□□ -1.51
PRP39YML046W YEL077CQ3E7X8 1277 aa5.59□□□□□ -1.51
PRP39YML046W KEX1P09620 729 aa5.57□□□□□ -1.52
PRP39YML046W SDH2P21801 266 aa5.57□□□□□ -1.52
PRP39YML046W CDC73Q06697 393 aa5.56□□□□□ -1.52
PRP39YML046W PDR1P12383 1068 aa5.55□□□□□ -1.52
PRP39YML046W MRF1P30775 413 aaPredicted RBP5.52□□□□□ -1.53
PRP39YML046W BRE2P43132 505 aa5.49□□□□□ -1.53
PRP39YML046W GBP2P25555 427 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
PRP39YML046W RPP1BP10622 106 aaKnown RBP5.48□□□□□ -1.53
PRP39YML046W GAR1P28007 205 aaKnown RBP5.47□□□□□ -1.53
PRP39YML046W GCR2Q01722 534 aa5.46□□□□□ -1.54
PRP39YML046W YLR326WQ06170 240 aaKnown RBP5.45□□□□□ -1.54
PRP39YML046W PRT1P06103 763 aaKnown RBP5.43□□□□□ -1.54
PRP39YML046W ERG12P07277 443 aa5.43□□□□□ -1.54
PRP39YML046W RAD54P32863 898 aa5.43□□□□□ -1.54
PRP39YML046W VHR2P40041 505 aa5.43□□□□□ -1.54
PRP39YML046W UBP14P38237 781 aaKnown RBP5.42□□□□□ -1.54
PRP39YML046W BUD20Q08004 166 aaPredicted RBP5.42□□□□□ -1.54
PRP39YML046W PCS60P38137 543 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
PRP39YML046W AIR1P40507 360 aaKnown RBP5.41□□□□□ -1.54
PRP39YML046W CST6P40535 587 aa5.38□□□□□ -1.55
PRP39YML046W PEX21P50091 288 aa5.38□□□□□ -1.55
PRP39YML046W YRR1Q12172 810 aa5.38□□□□□ -1.55
PRP39YML046W STR2P47164 639 aa5.37□□□□□ -1.55
PRP39YML046W CLA4P48562 842 aa5.37□□□□□ -1.55
PRP39YML046W ISM1P48526 1002 aa5.35□□□□□ -1.55
PRP39YML046W LAM6Q08001 693 aa5.34□□□□□ -1.55
PRP39YML046W NUD1P32336 851 aa5.33□□□□□ -1.56
PRP39YML046W CDC4P07834 779 aa5.32□□□□□ -1.56
PRP39YML046W SET1P38827 1080 aaKnown RBP5.32□□□□□ -1.56
PRP39YML046W NPL4P33755 580 aa5.32□□□□□ -1.56
PRP39YML046W SPT16P32558 1035 aaKnown RBP5.31□□□□□ -1.56
PRP39YML046W KIC1P38692 1080 aa5.31□□□□□ -1.56
PRP39YML046W TFB4Q12004 338 aa5.31□□□□□ -1.56
PRP39YML046W MET22P32179 357 aa5.3□□□□□ -1.56
PRP39YML046W FRK1Q03002 865 aaPredicted RBP5.3□□□□□ -1.56
PRP39YML046W ENV9Q08651 330 aa5.3□□□□□ -1.56
PRP39YML046W CSC1Q06538 782 aa5.3□□□□□ -1.56
PRP39YML046W TUM1Q08686 304 aaKnown RBP5.29□□□□□ -1.56
PRP39YML046W GAP1P19145 602 aaPredicted RBP5.28□□□□□ -1.56
PRP39YML046W GCD11P32481 527 aaKnown RBP5.28□□□□□ -1.56
PRP39YML046W YDR090CQ03193 310 aa5.27□□□□□ -1.57
PRP39YML046W TY1A-DR4O74302 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-HP0C2I4 478 aaKnown RBP5.26□□□□□ -1.57
PRP39YML046W TY1A-AP0CX57 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-PR1P0CX58 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-ORP0CX59 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-PR2P0CX60 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-DR5P0CX65 440 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms