RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C MLP2P40457 1679 aa14.76□□□□□ -0.05
ARP6YLR085C IFH1P39520 1085 aa14.75□□□□□ -0.05
ARP6YLR085C ESC1Q03661 1658 aaKnown RBP14.74□□□□□ -0.05
ARP6YLR085C TSC11P40061 1430 aa14.74□□□□□ -0.05
ARP6YLR085C VTH1P40438 1549 aa14.74□□□□□ -0.05
ARP6YLR085C VTH2P40890 1549 aa14.74□□□□□ -0.05
ARP6YLR085C PDR15Q04182 1529 aaKnown RBP14.7□□□□□ -0.06
ARP6YLR085C TRM732Q03496 1420 aa14.68□□□□□ -0.06
ARP6YLR085C TY1B-JR2P47100 1755 aaKnown RBP14.63□□□□□ -0.07
ARP6YLR085C TY1B-ER2Q03619 1755 aa14.63□□□□□ -0.07
ARP6YLR085C TY1B-MR1Q04214 1755 aa14.63□□□□□ -0.07
ARP6YLR085C TY1B-MR2Q04670 1755 aaKnown RBP14.63□□□□□ -0.07
ARP6YLR085C TY1B-LR1Q12088 1755 aaKnown RBP14.63□□□□□ -0.07
ARP6YLR085C TY1B-NL1Q12112 1755 aa14.63□□□□□ -0.07
ARP6YLR085C TY1B-GR1Q12141 1755 aa14.63□□□□□ -0.07
ARP6YLR085C TY1B-BLQ12490 1755 aa14.63□□□□□ -0.07
ARP6YLR085C ULS1Q08562 1619 aa14.62□□□□□ -0.07
ARP6YLR085C DNF1P32660 1571 aa14.62□□□□□ -0.07
ARP6YLR085C RPA190P10964 1664 aaKnown RBP14.6□□□□□ -0.07
ARP6YLR085C RTT106P40161 455 aa14.59□□□□□ -0.07
ARP6YLR085C GEA1P47102 1408 aaPredicted RBP14.58□□□□□ -0.07
ARP6YLR085C SNT2P53127 1403 aa14.56□□□□□ -0.08
ARP6YLR085C IKI3Q06706 1349 aaKnown RBP14.54□□□□□ -0.08
ARP6YLR085C NTE1Q04958 1679 aa14.53□□□□□ -0.08
ARP6YLR085C RPO21P04050 1733 aaKnown RBP14.48□□□□□ -0.09
ARP6YLR085C NUP159P40477 1460 aa14.46□□□□□ -0.09
ARP6YLR085C GEA2P39993 1459 aaKnown RBP14.44□□□□□ -0.1
ARP6YLR085C TY3B-GQ99315 1547 aa14.38□□□□□ -0.11
ARP6YLR085C VPS15P22219 1454 aa14.38□□□□□ -0.11
ARP6YLR085C SSM4P40318 1319 aa14.36□□□□□ -0.11
ARP6YLR085C IRC20Q06554 1556 aa14.35□□□□□ -0.11
ARP6YLR085C MET5P47169 1442 aa14.34□□□□□ -0.11
ARP6YLR085C MET10P39692 1035 aa14.33□□□□□ -0.12
ARP6YLR085C NUP170P38181 1502 aa14.32□□□□□ -0.12
ARP6YLR085C YBT1P32386 1661 aa14.31□□□□□ -0.12
ARP6YLR085C CAT8P39113 1433 aa14.31□□□□□ -0.12
ARP6YLR085C YGL015CP33199 130 aa14.31□□□□□ -0.12
ARP6YLR085C SPT21P35209 758 aa14.31□□□□□ -0.12
ARP6YLR085C YRF1-1P0CX20 1796 aa14.29□□□□□ -0.12
ARP6YLR085C YRF1-5P0CX21 1796 aa14.29□□□□□ -0.12
ARP6YLR085C YRF1-8P0CX22 1796 aa14.29□□□□□ -0.12
ARP6YLR085C CKB1P43639 278 aa14.25□□□□□ -0.13
ARP6YLR085C SPO14P36126 1683 aa14.25□□□□□ -0.13
ARP6YLR085C NUP157P40064 1391 aaKnown RBP14.24□□□□□ -0.13
ARP6YLR085C PDR12Q02785 1511 aa14.21□□□□□ -0.14
ARP6YLR085C PDR10P51533 1564 aa14.2□□□□□ -0.14
ARP6YLR085C GDB1Q06625 1536 aa14.2□□□□□ -0.14
ARP6YLR085C ARO1P08566 1588 aaKnown RBP14.15□□□□□ -0.14
ARP6YLR085C SRB8P25648 1427 aa14.15□□□□□ -0.14
ARP6YLR085C BUD3P25558 1636 aa14.11□□□□□ -0.15
ARP6YLR085C YKR023WP36119 530 aaKnown RBP14.11□□□□□ -0.15
ARP6YLR085C CDC27P38042 758 aa14.07□□□□□ -0.16
ARP6YLR085C BUD21Q08492 214 aaPredicted RBP14.05□□□□□ -0.16
ARP6YLR085C IQG1Q12280 1495 aa14.05□□□□□ -0.16
ARP6YLR085C LTE1P07866 1435 aa14.03□□□□□ -0.16
ARP6YLR085C YSP2Q06681 1438 aa14□□□□□ -0.17
ARP6YLR085C MMS1Q06211 1407 aa13.96□□□□□ -0.18
ARP6YLR085C BNR1P40450 1375 aa13.94□□□□□ -0.18
ARP6YLR085C RIM101P33400 625 aa13.93□□□□□ -0.18
ARP6YLR085C DRS2P39524 1355 aa13.93□□□□□ -0.18
ARP6YLR085C GCN2P15442 1659 aa13.89□□□□□ -0.19
ARP6YLR085C TFC8Q12308 588 aa13.88□□□□□ -0.19
ARP6YLR085C HOP09932 586 aa13.87□□□□□ -0.19
ARP6YLR085C TFA1P36100 482 aa13.86□□□□□ -0.19
ARP6YLR085C SEC7P11075 2009 aaKnown RBP13.84□□□□□ -0.19
ARP6YLR085C NOP7P53261 605 aaKnown RBP13.83□□□□□ -0.2
ARP6YLR085C DOP1Q03921 1698 aa13.82□□□□□ -0.2
ARP6YLR085C TRM3Q07527 1436 aa13.82□□□□□ -0.2
ARP6YLR085C ITT1Q04638 464 aa13.82□□□□□ -0.2
ARP6YLR085C UBP10P53874 792 aaPredicted RBP13.8□□□□□ -0.2
ARP6YLR085C PAF1P38351 445 aa13.79□□□□□ -0.2
ARP6YLR085C CHC1P22137 1653 aaKnown RBP13.76□□□□□ -0.21
ARP6YLR085C DCD1P06773 312 aa13.74□□□□□ -0.21
ARP6YLR085C POL5P39985 1022 aaKnown RBP13.73□□□□□ -0.21
ARP6YLR085C BNI1P41832 1953 aa13.72□□□□□ -0.21
ARP6YLR085C YOR093CQ12275 1648 aa13.71□□□□□ -0.21
ARP6YLR085C MAP2P38174 421 aaKnown RBP13.65□□□□□ -0.22
ARP6YLR085C PDR5P33302 1511 aaKnown RBP13.64□□□□□ -0.23
ARP6YLR085C NUP188P52593 1655 aaKnown RBP13.6□□□□□ -0.23
ARP6YLR085C VMR1P38735 1592 aa13.6□□□□□ -0.23
ARP6YLR085C IML1P47170 1584 aa13.58□□□□□ -0.24
ARP6YLR085C ORC1P54784 914 aaPredicted RBP13.58□□□□□ -0.24
ARP6YLR085C URN1Q06525 465 aaKnown RBP13.57□□□□□ -0.24
ARP6YLR085C PDR11P40550 1411 aa13.56□□□□□ -0.24
ARP6YLR085C RAV1P47104 1357 aa13.55□□□□□ -0.24
ARP6YLR085C DNF2Q12675 1612 aa13.54□□□□□ -0.24
ARP6YLR085C RTC1Q08281 1341 aa13.52□□□□□ -0.25
ARP6YLR085C TAF5P38129 798 aa13.51□□□□□ -0.25
ARP6YLR085C TYS1P36421 394 aaKnown RBP13.5□□□□□ -0.25
ARP6YLR085C IPL1P38991 367 aa13.49□□□□□ -0.25
ARP6YLR085C SCY1P53009 804 aa13.47□□□□□ -0.25
ARP6YLR085C YAP3P38749 330 aa13.45□□□□□ -0.26
ARP6YLR085C YIL055CP40523 627 aaKnown RBP13.45□□□□□ -0.26
ARP6YLR085C BCH2P36122 765 aa13.43□□□□□ -0.26
ARP6YLR085C ESL2P36168 1195 aa13.42□□□□□ -0.26
ARP6YLR085C OXP1P28273 1286 aa13.4□□□□□ -0.26
ARP6YLR085C PTP3P40048 928 aa13.38□□□□□ -0.27
ARP6YLR085C KIP3P53086 805 aaKnown RBP13.38□□□□□ -0.27
ARP6YLR085C ABP1P15891 592 aaKnown RBP13.36□□□□□ -0.27
ARP6YLR085C SLX5P32828 619 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms