RNA–Protein interactions for RNA: YLL028W

TPO1, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO1YLL028W IFH1P39520 1085 aa10.95□□□□□ -0.66
TPO1YLL028W TSC11P40061 1430 aa10.92□□□□□ -0.66
TPO1YLL028W TAF7Q05021 590 aa10.92□□□□□ -0.66
TPO1YLL028W YBT1P32386 1661 aa10.91□□□□□ -0.66
TPO1YLL028W RQC2Q12532 1038 aaKnown RBP10.9□□□□□ -0.66
TPO1YLL028W SNT2P53127 1403 aa10.87□□□□□ -0.67
TPO1YLL028W PAN1P32521 1480 aa10.87□□□□□ -0.67
TPO1YLL028W RPA190P10964 1664 aaKnown RBP10.85□□□□□ -0.67
TPO1YLL028W NTE1Q04958 1679 aa10.84□□□□□ -0.67
TPO1YLL028W RPO21P04050 1733 aaKnown RBP10.83□□□□□ -0.68
TPO1YLL028W DNF1P32660 1571 aa10.82□□□□□ -0.68
TPO1YLL028W IRC20Q06554 1556 aa10.81□□□□□ -0.68
TPO1YLL028W VPS15P22219 1454 aa10.79□□□□□ -0.68
TPO1YLL028W GEA2P39993 1459 aaKnown RBP10.7□□□□□ -0.7
TPO1YLL028W GDB1Q06625 1536 aa10.7□□□□□ -0.7
TPO1YLL028W ARO1P08566 1588 aaKnown RBP10.66□□□□□ -0.7
TPO1YLL028W YRF1-1P0CX20 1796 aa10.66□□□□□ -0.7
TPO1YLL028W YRF1-5P0CX21 1796 aa10.66□□□□□ -0.7
TPO1YLL028W YRF1-8P0CX22 1796 aa10.66□□□□□ -0.7
TPO1YLL028W NSR1P27476 414 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
TPO1YLL028W SPO14P36126 1683 aa10.65□□□□□ -0.71
TPO1YLL028W CAT8P39113 1433 aa10.63□□□□□ -0.71
TPO1YLL028W BUD3P25558 1636 aa10.61□□□□□ -0.71
TPO1YLL028W PDR10P51533 1564 aa10.61□□□□□ -0.71
TPO1YLL028W NUP159P40477 1460 aa10.61□□□□□ -0.71
TPO1YLL028W RTT106P40161 455 aa10.61□□□□□ -0.71
TPO1YLL028W GCN2P15442 1659 aa10.56□□□□□ -0.72
TPO1YLL028W SRB8P25648 1427 aa10.55□□□□□ -0.72
TPO1YLL028W PDR12Q02785 1511 aa10.55□□□□□ -0.72
TPO1YLL028W MTC1P47018 478 aaKnown RBP10.49□□□□□ -0.73
TPO1YLL028W CKB1P43639 278 aa10.49□□□□□ -0.73
TPO1YLL028W NUP157P40064 1391 aaKnown RBP10.48□□□□□ -0.73
TPO1YLL028W POL5P39985 1022 aaKnown RBP10.47□□□□□ -0.73
TPO1YLL028W YSP2Q06681 1438 aa10.45□□□□□ -0.74
TPO1YLL028W MET10P39692 1035 aa10.42□□□□□ -0.74
TPO1YLL028W YOR093CQ12275 1648 aa10.4□□□□□ -0.74
TPO1YLL028W SPT7P35177 1332 aa10.39□□□□□ -0.75
TPO1YLL028W IQG1Q12280 1495 aa10.39□□□□□ -0.75
TPO1YLL028W PDR5P33302 1511 aaKnown RBP10.36□□□□□ -0.75
TPO1YLL028W CHC1P22137 1653 aaKnown RBP10.36□□□□□ -0.75
TPO1YLL028W MET5P47169 1442 aa10.35□□□□□ -0.75
TPO1YLL028W SEC7P11075 2009 aaKnown RBP10.35□□□□□ -0.75
TPO1YLL028W NOP2P40991 618 aaKnown RBP10.34□□□□□ -0.75
TPO1YLL028W BUD21Q08492 214 aaPredicted RBP10.34□□□□□ -0.75
TPO1YLL028W MMS1Q06211 1407 aa10.32□□□□□ -0.76
TPO1YLL028W ENP1P38333 483 aaKnown RBP10.31□□□□□ -0.76
TPO1YLL028W VMR1P38735 1592 aa10.29□□□□□ -0.76
TPO1YLL028W LTE1P07866 1435 aa10.28□□□□□ -0.76
TPO1YLL028W NOP7P53261 605 aaKnown RBP10.27□□□□□ -0.77
TPO1YLL028W PDR11P40550 1411 aa10.27□□□□□ -0.77
TPO1YLL028W ORC1P54784 914 aaPredicted RBP10.26□□□□□ -0.77
TPO1YLL028W BNR1P40450 1375 aa10.24□□□□□ -0.77
TPO1YLL028W SEC3P33332 1336 aaKnown RBP10.23□□□□□ -0.77
TPO1YLL028W DOP1Q03921 1698 aa10.22□□□□□ -0.77
TPO1YLL028W LEU3P08638 886 aa10.21□□□□□ -0.77
TPO1YLL028W NUP192P47054 1683 aa10.2□□□□□ -0.78
TPO1YLL028W PSD2P53037 1138 aaKnown RBP10.2□□□□□ -0.78
TPO1YLL028W TY3B-IQ7LHG5 1498 aaKnown RBP10.2□□□□□ -0.78
TPO1YLL028W NUP188P52593 1655 aaKnown RBP10.19□□□□□ -0.78
TPO1YLL028W MHP1P43638 1398 aa10.18□□□□□ -0.78
TPO1YLL028W BFR2Q06631 534 aaKnown RBP10.17□□□□□ -0.78
TPO1YLL028W RAV1P47104 1357 aa10.15□□□□□ -0.78
TPO1YLL028W IML1P47170 1584 aa10.15□□□□□ -0.79
TPO1YLL028W PRS1P32895 427 aaKnown RBP10.14□□□□□ -0.79
TPO1YLL028W PAF1P38351 445 aa10.14□□□□□ -0.79
TPO1YLL028W YLR419WQ06698 1435 aaKnown RBP10.14□□□□□ -0.79
TPO1YLL028W DNF2Q12675 1612 aa10.12□□□□□ -0.79
TPO1YLL028W NST1P53935 1240 aa10.11□□□□□ -0.79
TPO1YLL028W RTC1Q08281 1341 aa10.11□□□□□ -0.79
TPO1YLL028W DRS2P39524 1355 aa10.1□□□□□ -0.79
TPO1YLL028W TAF5P38129 798 aa10.09□□□□□ -0.79
TPO1YLL028W TRM3Q07527 1436 aa10.05□□□□□ -0.8
TPO1YLL028W BNI1P41832 1953 aa10.04□□□□□ -0.8
TPO1YLL028W KIP3P53086 805 aaKnown RBP10.02□□□□□ -0.81
TPO1YLL028W PDS5Q04264 1277 aa10.02□□□□□ -0.81
TPO1YLL028W MLP1Q02455 1875 aaKnown RBP10.01□□□□□ -0.81
TPO1YLL028W TYS1P36421 394 aaKnown RBP9.97□□□□□ -0.81
TPO1YLL028W ESL2P36168 1195 aa9.95□□□□□ -0.82
TPO1YLL028W CFT1Q06632 1357 aaKnown RBP9.94□□□□□ -0.82
TPO1YLL028W YAP3P38749 330 aa9.93□□□□□ -0.82
TPO1YLL028W RAD9P14737 1309 aa9.91□□□□□ -0.82
TPO1YLL028W SPE2P21182 396 aa9.91□□□□□ -0.82
TPO1YLL028W FUN12P39730 1002 aaKnown RBP9.91□□□□□ -0.82
TPO1YLL028W ITT1Q04638 464 aa9.91□□□□□ -0.82
TPO1YLL028W BCK1Q01389 1478 aa9.9□□□□□ -0.83
TPO1YLL028W RTG3P38165 486 aa9.88□□□□□ -0.83
TPO1YLL028W IPL1P38991 367 aa9.87□□□□□ -0.83
TPO1YLL028W TAF8Q03750 510 aa9.86□□□□□ -0.83
TPO1YLL028W SNF2P22082 1703 aa9.83□□□□□ -0.84
TPO1YLL028W YML133CQ03099 1374 aa9.82□□□□□ -0.84
TPO1YLL028W YLL067CQ07888 1374 aa9.82□□□□□ -0.84
TPO1YLL028W YLL066CQ99208 1374 aa9.82□□□□□ -0.84
TPO1YLL028W TRK1P12685 1235 aa9.82□□□□□ -0.84
TPO1YLL028W YEF3P16521 1044 aaKnown RBP9.82□□□□□ -0.84
TPO1YLL028W ALD4P46367 519 aaKnown RBP9.81□□□□□ -0.84
TPO1YLL028W CAB1Q04430 367 aa9.81□□□□□ -0.84
TPO1YLL028W FKH1P40466 484 aa9.79□□□□□ -0.84
TPO1YLL028W CHZ1P40019 153 aaPredicted RBP9.78□□□□□ -0.84
TPO1YLL028W RVB2Q12464 471 aaKnown RBP9.76□□□□□ -0.85
TPO1YLL028W DNF3Q12674 1656 aa9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms