RNA–Protein interactions for RNA: YKR008W

RSC4, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC4, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC4YKR008W SSA4P22202 642 aaKnown RBP11.17□□□□□ -0.62
RSC4YKR008W RTG3P38165 486 aa11.17□□□□□ -0.62
RSC4YKR008W MET10P39692 1035 aa11.15□□□□□ -0.62
RSC4YKR008W BCH2P36122 765 aa11.14□□□□□ -0.63
RSC4YKR008W YJL007CP47080 104 aa11.14□□□□□ -0.63
RSC4YKR008W COX6P00427 148 aa11.13□□□□□ -0.63
RSC4YKR008W RRN6P32786 894 aa11.12□□□□□ -0.63
RSC4YKR008W EBP2P36049 427 aaKnown RBP11.12□□□□□ -0.63
RSC4YKR008W SEN54Q02825 467 aaPredicted RBP11.12□□□□□ -0.63
RSC4YKR008W FAP1P53971 965 aa11.12□□□□□ -0.63
RSC4YKR008W NOP53Q12080 455 aaKnown RBP11.1□□□□□ -0.63
RSC4YKR008W SSF1P38789 453 aaPredicted RBP11.08□□□□□ -0.64
RSC4YKR008W ERG12P07277 443 aa11.07□□□□□ -0.64
RSC4YKR008W CPS1P27614 576 aa11.06□□□□□ -0.64
RSC4YKR008W NOB1Q08444 459 aaKnown RBP11.06□□□□□ -0.64
RSC4YKR008W YTA7P40340 1379 aa11.06□□□□□ -0.64
RSC4YKR008W HEM3P28789 327 aa11.05□□□□□ -0.64
RSC4YKR008W SSA2P10592 639 aaKnown RBP11.04□□□□□ -0.64
RSC4YKR008W CDC3P32457 520 aaKnown RBP11.04□□□□□ -0.64
RSC4YKR008W TIF1P10081 395 aaKnown RBP11.04□□□□□ -0.64
RSC4YKR008W EPS1P40557 701 aa11.04□□□□□ -0.64
RSC4YKR008W MDG1P53885 366 aa11.02□□□□□ -0.64
RSC4YKR008W TTI1P36097 1038 aa11.01□□□□□ -0.65
RSC4YKR008W EDS1P38073 919 aa11.01□□□□□ -0.65
RSC4YKR008W VPS29P38759 282 aa11.01□□□□□ -0.65
RSC4YKR008W CSN12P47130 423 aa11.01□□□□□ -0.65
RSC4YKR008W CAB3P36076 571 aa11□□□□□ -0.65
RSC4YKR008W CDC27P38042 758 aa11□□□□□ -0.65
RSC4YKR008W RPL34AP87262 121 aaPredicted RBP11□□□□□ -0.65
RSC4YKR008W SUB1P54000 292 aaKnown RBP11□□□□□ -0.65
RSC4YKR008W BRN1P38170 754 aa10.99□□□□□ -0.65
RSC4YKR008W OCA5P38738 679 aa10.98□□□□□ -0.65
RSC4YKR008W NUG1P40010 520 aaKnown RBP10.97□□□□□ -0.65
RSC4YKR008W GIN4Q12263 1142 aa10.97□□□□□ -0.65
RSC4YKR008W SWE1P32944 819 aa10.95□□□□□ -0.66
RSC4YKR008W SPC42P36094 363 aa10.95□□□□□ -0.66
RSC4YKR008W VPS72Q03388 795 aa10.95□□□□□ -0.66
RSC4YKR008W KTR1P27810 393 aaKnown RBP10.94□□□□□ -0.66
RSC4YKR008W FAR11P53917 953 aa10.94□□□□□ -0.66
RSC4YKR008W DOS2P54858 310 aa10.94□□□□□ -0.66
RSC4YKR008W ASF1P32447 279 aa10.93□□□□□ -0.66
RSC4YKR008W RPL34BP40525 121 aaKnown RBP10.93□□□□□ -0.66
RSC4YKR008W BDF1P35817 686 aa10.93□□□□□ -0.66
RSC4YKR008W UBP14P38237 781 aaKnown RBP10.93□□□□□ -0.66
RSC4YKR008W ATG36P46983 293 aa10.92□□□□□ -0.66
RSC4YKR008W YDR090CQ03193 310 aa10.92□□□□□ -0.66
RSC4YKR008W YPR204WQ08995 1032 aa10.91□□□□□ -0.66
RSC4YKR008W MIF2P35201 549 aa10.91□□□□□ -0.66
RSC4YKR008W YML083CQ04526 418 aa10.91□□□□□ -0.66
RSC4YKR008W HAT1Q12341 374 aa10.91□□□□□ -0.66
RSC4YKR008W BIO2P32451 375 aa10.9□□□□□ -0.66
RSC4YKR008W RTG2P32608 588 aaKnown RBP10.86□□□□□ -0.67
RSC4YKR008W LAM6Q08001 693 aa10.86□□□□□ -0.67
RSC4YKR008W PUP1P25043 261 aa10.85□□□□□ -0.67
RSC4YKR008W MRPL32P25348 183 aa10.85□□□□□ -0.67
RSC4YKR008W YBL036CP38197 257 aa10.83□□□□□ -0.68
RSC4YKR008W IPL1P38991 367 aa10.83□□□□□ -0.68
RSC4YKR008W ITT1Q04638 464 aa10.83□□□□□ -0.68
RSC4YKR008W ALD2P47771 506 aa10.82□□□□□ -0.68
RSC4YKR008W CWC22P53333 577 aaKnown RBP10.82□□□□□ -0.68
RSC4YKR008W PSE1P32337 1089 aaKnown RBP10.81□□□□□ -0.68
RSC4YKR008W STS1P38637 319 aa10.81□□□□□ -0.68
RSC4YKR008W TYW1Q08960 810 aaKnown RBP10.8□□□□□ -0.68
RSC4YKR008W VHR2P40041 505 aa10.79□□□□□ -0.68
RSC4YKR008W RTS3P53289 263 aa10.79□□□□□ -0.68
RSC4YKR008W ALD4P46367 519 aaKnown RBP10.78□□□□□ -0.68
RSC4YKR008W PTC3P34221 468 aaKnown RBP10.77□□□□□ -0.69
RSC4YKR008W YNL108CP53929 270 aa10.77□□□□□ -0.69
RSC4YKR008W RRP15Q06511 250 aaPredicted RBP10.76□□□□□ -0.69
RSC4YKR008W TOA1P32773 286 aa10.75□□□□□ -0.69
RSC4YKR008W OSW7P43611 510 aa10.75□□□□□ -0.69
RSC4YKR008W FPR4Q06205 392 aaPredicted RBP10.74□□□□□ -0.69
RSC4YKR008W YLR326WQ06170 240 aaKnown RBP10.74□□□□□ -0.69
RSC4YKR008W HIF1Q12373 385 aa10.74□□□□□ -0.69
RSC4YKR008W SUP45P12385 437 aaKnown RBP10.73□□□□□ -0.69
RSC4YKR008W STM1P39015 273 aaKnown RBP10.73□□□□□ -0.69
RSC4YKR008W YAF9P53930 226 aa10.73□□□□□ -0.69
RSC4YKR008W YMR1P47147 688 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
RSC4YKR008W TPO2P53283 614 aa10.71□□□□□ -0.69
RSC4YKR008W RLP24Q07915 199 aaKnown RBP10.71□□□□□ -0.69
RSC4YKR008W ENO1P00924 437 aaKnown RBP10.69□□□□□ -0.7
RSC4YKR008W CST6P40535 587 aa10.69□□□□□ -0.7
RSC4YKR008W KEX1P09620 729 aa10.68□□□□□ -0.7
RSC4YKR008W NMD2P38798 1089 aaKnown RBP10.68□□□□□ -0.7
RSC4YKR008W NNF1P47149 201 aa10.68□□□□□ -0.7
RSC4YKR008W TEA1P47988 759 aa10.68□□□□□ -0.7
RSC4YKR008W MRX10Q05648 414 aa10.68□□□□□ -0.7
RSC4YKR008W YBL113CQ7M4S9 792 aa10.68□□□□□ -0.7
RSC4YKR008W ATE1P16639 503 aa10.67□□□□□ -0.7
RSC4YKR008W SEC20P28791 383 aa10.67□□□□□ -0.7
RSC4YKR008W CSE4P36012 229 aa10.67□□□□□ -0.7
RSC4YKR008W YJR008WP47085 338 aa10.67□□□□□ -0.7
RSC4YKR008W NAB3P38996 802 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
RSC4YKR008W YFR006WP43590 535 aa10.66□□□□□ -0.7
RSC4YKR008W TGL4P36165 910 aa10.66□□□□□ -0.7
RSC4YKR008W MSC6Q08818 692 aaKnown RBP10.65□□□□□ -0.7
RSC4YKR008W DBP1P24784 617 aaKnown RBP10.64□□□□□ -0.71
RSC4YKR008W RAD59Q12223 238 aa10.64□□□□□ -0.71
RSC4YKR008W ENO2P00925 437 aaKnown RBP10.64□□□□□ -0.71
RSC4YKR008W ERP5P38819 212 aa10.64□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms