RNA–Protein interactions for RNA: YKL127W

PGM1, Transcript of Phosphoglucomutase, minor isoform, yeastyeast

Gene PGM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGM1YKL127W TY1B-MR2Q04670 1755 aaKnown RBP8.82□□□□□ -1
PGM1YKL127W TY1B-LR1Q12088 1755 aaKnown RBP8.82□□□□□ -1
PGM1YKL127W TY1B-NL1Q12112 1755 aa8.82□□□□□ -1
PGM1YKL127W TY1B-GR1Q12141 1755 aa8.82□□□□□ -1
PGM1YKL127W TY1B-BLQ12490 1755 aa8.82□□□□□ -1
PGM1YKL127W ESC1Q03661 1658 aaKnown RBP8.82□□□□□ -1
PGM1YKL127W YBT1P32386 1661 aa8.78□□□□□ -1
PGM1YKL127W VPS15P22219 1454 aa8.75□□□□□ -1.01
PGM1YKL127W NTE1Q04958 1679 aa8.74□□□□□ -1.01
PGM1YKL127W IRC20Q06554 1556 aa8.74□□□□□ -1.01
PGM1YKL127W GEA2P39993 1459 aaKnown RBP8.73□□□□□ -1.01
PGM1YKL127W RPA190P10964 1664 aaKnown RBP8.72□□□□□ -1.01
PGM1YKL127W DNF1P32660 1571 aa8.71□□□□□ -1.01
PGM1YKL127W RPO21P04050 1733 aaKnown RBP8.7□□□□□ -1.02
PGM1YKL127W NSR1P27476 414 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
PGM1YKL127W RTT106P40161 455 aa8.69□□□□□ -1.02
PGM1YKL127W CAT8P39113 1433 aa8.68□□□□□ -1.02
PGM1YKL127W GDB1Q06625 1536 aa8.65□□□□□ -1.02
PGM1YKL127W ARO1P08566 1588 aaKnown RBP8.63□□□□□ -1.03
PGM1YKL127W POL5P39985 1022 aaKnown RBP8.63□□□□□ -1.03
PGM1YKL127W SRB8P25648 1427 aa8.62□□□□□ -1.03
PGM1YKL127W NUP159P40477 1460 aa8.61□□□□□ -1.03
PGM1YKL127W PDR10P51533 1564 aa8.6□□□□□ -1.03
PGM1YKL127W PDR12Q02785 1511 aa8.57□□□□□ -1.04
PGM1YKL127W GCN2P15442 1659 aa8.56□□□□□ -1.04
PGM1YKL127W SPO14P36126 1683 aa8.56□□□□□ -1.04
PGM1YKL127W CKB1P43639 278 aa8.55□□□□□ -1.04
PGM1YKL127W MTC1P47018 478 aaKnown RBP8.53□□□□□ -1.04
PGM1YKL127W YRF1-1P0CX20 1796 aa8.53□□□□□ -1.04
PGM1YKL127W YRF1-5P0CX21 1796 aa8.53□□□□□ -1.04
PGM1YKL127W YRF1-8P0CX22 1796 aa8.53□□□□□ -1.04
PGM1YKL127W NUP157P40064 1391 aaKnown RBP8.53□□□□□ -1.04
PGM1YKL127W BUD3P25558 1636 aa8.53□□□□□ -1.04
PGM1YKL127W MET10P39692 1035 aa8.51□□□□□ -1.05
PGM1YKL127W NOP2P40991 618 aaKnown RBP8.51□□□□□ -1.05
PGM1YKL127W ENP1P38333 483 aaKnown RBP8.5□□□□□ -1.05
PGM1YKL127W YSP2Q06681 1438 aa8.48□□□□□ -1.05
PGM1YKL127W SPT7P35177 1332 aa8.48□□□□□ -1.05
PGM1YKL127W SEC3P33332 1336 aaKnown RBP8.47□□□□□ -1.05
PGM1YKL127W BUD21Q08492 214 aaPredicted RBP8.47□□□□□ -1.05
PGM1YKL127W IQG1Q12280 1495 aa8.46□□□□□ -1.06
PGM1YKL127W MMS1Q06211 1407 aa8.46□□□□□ -1.06
PGM1YKL127W PDR5P33302 1511 aaKnown RBP8.45□□□□□ -1.06
PGM1YKL127W NOP7P53261 605 aaKnown RBP8.45□□□□□ -1.06
PGM1YKL127W MET5P47169 1442 aa8.43□□□□□ -1.06
PGM1YKL127W YOR093CQ12275 1648 aa8.41□□□□□ -1.06
PGM1YKL127W LTE1P07866 1435 aa8.37□□□□□ -1.07
PGM1YKL127W BNR1P40450 1375 aa8.36□□□□□ -1.07
PGM1YKL127W CHC1P22137 1653 aaKnown RBP8.36□□□□□ -1.07
PGM1YKL127W PAF1P38351 445 aa8.35□□□□□ -1.07
PGM1YKL127W MHP1P43638 1398 aa8.35□□□□□ -1.07
PGM1YKL127W BFR2Q06631 534 aaKnown RBP8.34□□□□□ -1.07
PGM1YKL127W SEC7P11075 2009 aaKnown RBP8.34□□□□□ -1.07
PGM1YKL127W LEU3P08638 886 aa8.33□□□□□ -1.08
PGM1YKL127W ORC1P54784 914 aaPredicted RBP8.32□□□□□ -1.08
PGM1YKL127W PSD2P53037 1138 aaKnown RBP8.31□□□□□ -1.08
PGM1YKL127W TY3B-IQ7LHG5 1498 aaKnown RBP8.31□□□□□ -1.08
PGM1YKL127W PDR11P40550 1411 aa8.3□□□□□ -1.08
PGM1YKL127W VMR1P38735 1592 aa8.3□□□□□ -1.08
PGM1YKL127W RAV1P47104 1357 aa8.29□□□□□ -1.08
PGM1YKL127W PRS1P32895 427 aaKnown RBP8.29□□□□□ -1.08
PGM1YKL127W YLR419WQ06698 1435 aaKnown RBP8.28□□□□□ -1.08
PGM1YKL127W RTC1Q08281 1341 aa8.26□□□□□ -1.09
PGM1YKL127W DOP1Q03921 1698 aa8.24□□□□□ -1.09
PGM1YKL127W IML1P47170 1584 aa8.24□□□□□ -1.09
PGM1YKL127W NUP188P52593 1655 aaKnown RBP8.24□□□□□ -1.09
PGM1YKL127W TAF5P38129 798 aa8.23□□□□□ -1.09
PGM1YKL127W DRS2P39524 1355 aa8.22□□□□□ -1.09
PGM1YKL127W TRM3Q07527 1436 aa8.22□□□□□ -1.09
PGM1YKL127W NUP192P47054 1683 aa8.21□□□□□ -1.09
PGM1YKL127W KIP3P53086 805 aaKnown RBP8.2□□□□□ -1.1
PGM1YKL127W PDS5Q04264 1277 aa8.2□□□□□ -1.1
PGM1YKL127W NST1P53935 1240 aa8.18□□□□□ -1.1
PGM1YKL127W ESL2P36168 1195 aa8.17□□□□□ -1.1
PGM1YKL127W DNF2Q12675 1612 aa8.17□□□□□ -1.1
PGM1YKL127W SPE2P21182 396 aa8.11□□□□□ -1.11
PGM1YKL127W CFT1Q06632 1357 aaKnown RBP8.09□□□□□ -1.11
PGM1YKL127W TYS1P36421 394 aaKnown RBP8.09□□□□□ -1.11
PGM1YKL127W YAP3P38749 330 aa8.07□□□□□ -1.12
PGM1YKL127W IPL1P38991 367 aa8.06□□□□□ -1.12
PGM1YKL127W BCK1Q01389 1478 aa8.06□□□□□ -1.12
PGM1YKL127W RAD9P14737 1309 aa8.05□□□□□ -1.12
PGM1YKL127W SCT1P32784 759 aa8.05□□□□□ -1.12
PGM1YKL127W RTG3P38165 486 aa8.05□□□□□ -1.12
PGM1YKL127W TAF8Q03750 510 aa8.05□□□□□ -1.12
PGM1YKL127W MLP1Q02455 1875 aaKnown RBP8.05□□□□□ -1.12
PGM1YKL127W FUN12P39730 1002 aaKnown RBP8.04□□□□□ -1.12
PGM1YKL127W BNI1P41832 1953 aa8.03□□□□□ -1.12
PGM1YKL127W ITT1Q04638 464 aa8.02□□□□□ -1.13
PGM1YKL127W CHZ1P40019 153 aaPredicted RBP8.01□□□□□ -1.13
PGM1YKL127W ALD4P46367 519 aaKnown RBP8.01□□□□□ -1.13
PGM1YKL127W FKH1P40466 484 aa8□□□□□ -1.13
PGM1YKL127W TFA1P36100 482 aa8□□□□□ -1.13
PGM1YKL127W VPS27P40343 622 aaKnown RBP8□□□□□ -1.13
PGM1YKL127W URN1Q06525 465 aaKnown RBP8□□□□□ -1.13
PGM1YKL127W RPP0P05317 312 aaKnown RBP7.99□□□□□ -1.13
PGM1YKL127W CAB1Q04430 367 aa7.99□□□□□ -1.13
PGM1YKL127W CDC45Q08032 650 aa7.99□□□□□ -1.13
PGM1YKL127W TRK1P12685 1235 aa7.98□□□□□ -1.13
PGM1YKL127W YEF3P16521 1044 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms