RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W TFG1P41895 735 aaPredicted RBP8.5□□□□□ -1.05
VMA5YKL080W YDL129WQ07555 291 aa8.5□□□□□ -1.05
VMA5YKL080W RAM2P29703 316 aa8.49□□□□□ -1.05
VMA5YKL080W EDS1P38073 919 aa8.46□□□□□ -1.06
VMA5YKL080W MAK11P20484 414 aaKnown RBP8.43□□□□□ -1.06
VMA5YKL080W GRE2Q12068 342 aaKnown RBP8.43□□□□□ -1.06
VMA5YKL080W YDR344CQ05510 147 aa8.42□□□□□ -1.06
VMA5YKL080W CHL1P22516 861 aaPredicted RBP8.41□□□□□ -1.06
VMA5YKL080W MIF2P35201 549 aa8.41□□□□□ -1.06
VMA5YKL080W PTC3P34221 468 aaKnown RBP8.4□□□□□ -1.06
VMA5YKL080W PRE3P38624 215 aa8.39□□□□□ -1.07
VMA5YKL080W NST1P53935 1240 aa8.38□□□□□ -1.07
VMA5YKL080W GUT1P32190 709 aa8.35□□□□□ -1.07
VMA5YKL080W BCK2P33306 851 aa8.35□□□□□ -1.07
VMA5YKL080W PML39Q03760 334 aa8.35□□□□□ -1.07
VMA5YKL080W COQ8P27697 501 aa8.34□□□□□ -1.07
VMA5YKL080W SOL3P38858 249 aa8.34□□□□□ -1.07
VMA5YKL080W ATH1P48016 1211 aa8.34□□□□□ -1.07
VMA5YKL080W MID1P41821 548 aa8.28□□□□□ -1.08
VMA5YKL080W ILV3P39522 585 aaKnown RBP8.25□□□□□ -1.09
VMA5YKL080W MPH3P0CE00 602 aa8.22□□□□□ -1.09
VMA5YKL080W VRP1P37370 817 aa8.22□□□□□ -1.09
VMA5YKL080W ELP4Q02884 456 aaKnown RBP8.22□□□□□ -1.09
VMA5YKL080W ARH1P48360 493 aa8.21□□□□□ -1.1
VMA5YKL080W AI4P03878 556 aa8.2□□□□□ -1.1
VMA5YKL080W XDJ1P39102 459 aa8.18□□□□□ -1.1
VMA5YKL080W YGR273CP53329 174 aa8.15□□□□□ -1.1
VMA5YKL080W NOP53Q12080 455 aaKnown RBP8.15□□□□□ -1.1
VMA5YKL080W PEX29Q03370 554 aa8.12□□□□□ -1.11
VMA5YKL080W SPT23P35210 1082 aa8.09□□□□□ -1.11
VMA5YKL080W MPC54Q08550 464 aa8.08□□□□□ -1.12
VMA5YKL080W HAP5Q02516 242 aa8.07□□□□□ -1.12
VMA5YKL080W SLI15P38283 698 aa8.05□□□□□ -1.12
VMA5YKL080W BNI4P53858 892 aa8.03□□□□□ -1.12
VMA5YKL080W YML082WQ04533 649 aaKnown RBP8.01□□□□□ -1.13
VMA5YKL080W NMA111P53920 997 aa8□□□□□ -1.13
VMA5YKL080W DPS1P04802 557 aaKnown RBP7.99□□□□□ -1.13
VMA5YKL080W KEX1P09620 729 aa7.97□□□□□ -1.13
VMA5YKL080W DPL1Q05567 589 aa7.96□□□□□ -1.14
VMA5YKL080W PTC2P39966 464 aaKnown RBP7.95□□□□□ -1.14
VMA5YKL080W SET1P38827 1080 aaKnown RBP7.94□□□□□ -1.14
VMA5YKL080W UBP14P38237 781 aaKnown RBP7.93□□□□□ -1.14
VMA5YKL080W YPR015CQ12531 247 aa7.93□□□□□ -1.14
VMA5YKL080W RAM1P22007 431 aa7.91□□□□□ -1.14
VMA5YKL080W YLR326WQ06170 240 aaKnown RBP7.91□□□□□ -1.14
VMA5YKL080W CDC73Q06697 393 aa7.91□□□□□ -1.14
VMA5YKL080W DMA1P38823 416 aa7.89□□□□□ -1.15
VMA5YKL080W SRC1Q03707 834 aa7.89□□□□□ -1.15
VMA5YKL080W ISU2Q12056 156 aa7.87□□□□□ -1.15
VMA5YKL080W PCS60P38137 543 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
VMA5YKL080W VHR2P40041 505 aa7.85□□□□□ -1.15
VMA5YKL080W RAS1P01119 309 aa7.81□□□□□ -1.16
VMA5YKL080W PDR1P12383 1068 aa7.81□□□□□ -1.16
VMA5YKL080W RAD54P32863 898 aa7.77□□□□□ -1.17
VMA5YKL080W YDR090CQ03193 310 aa7.77□□□□□ -1.17
VMA5YKL080W SDH2P21801 266 aa7.75□□□□□ -1.17
VMA5YKL080W GYP1Q08484 637 aa7.71□□□□□ -1.18
VMA5YKL080W VPS70P47161 811 aa7.7□□□□□ -1.18
VMA5YKL080W GAP1P19145 602 aaPredicted RBP7.68□□□□□ -1.18
VMA5YKL080W AMS1P22855 1083 aa7.67□□□□□ -1.18
VMA5YKL080W IFH1P39520 1085 aa7.67□□□□□ -1.18
VMA5YKL080W YPR148CQ06523 435 aa7.66□□□□□ -1.18
VMA5YKL080W BUD20Q08004 166 aaPredicted RBP7.66□□□□□ -1.18
VMA5YKL080W SAS4Q04003 481 aa7.64□□□□□ -1.19
VMA5YKL080W YRR1Q12172 810 aa7.64□□□□□ -1.19
VMA5YKL080W RPP1BP10622 106 aaKnown RBP7.62□□□□□ -1.19
VMA5YKL080W REF2P42073 533 aaPredicted RBP7.62□□□□□ -1.19
VMA5YKL080W STR2P47164 639 aa7.62□□□□□ -1.19
VMA5YKL080W KIC1P38692 1080 aa7.6□□□□□ -1.19
VMA5YKL080W ISM1P48526 1002 aa7.6□□□□□ -1.19
VMA5YKL080W RQC2Q12532 1038 aaKnown RBP7.6□□□□□ -1.19
VMA5YKL080W ORC6P38826 435 aa7.58□□□□□ -1.2
VMA5YKL080W CSC1Q06538 782 aa7.58□□□□□ -1.2
VMA5YKL080W TUM1Q08686 304 aaKnown RBP7.58□□□□□ -1.2
VMA5YKL080W PRT1P06103 763 aaKnown RBP7.57□□□□□ -1.2
VMA5YKL080W TRK1P12685 1235 aa7.57□□□□□ -1.2
VMA5YKL080W TFB4Q12004 338 aa7.57□□□□□ -1.2
VMA5YKL080W PEX21P50091 288 aa7.56□□□□□ -1.2
VMA5YKL080W NUD1P32336 851 aa7.55□□□□□ -1.2
VMA5YKL080W COX6P00427 148 aa7.52□□□□□ -1.21
VMA5YKL080W SEC2P17065 759 aa7.52□□□□□ -1.21
VMA5YKL080W RGA1P39083 1007 aa7.52□□□□□ -1.21
VMA5YKL080W YEL077CQ3E7X8 1277 aa7.52□□□□□ -1.21
VMA5YKL080W TY1A-DR4O74302 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-HP0C2I4 478 aaKnown RBP7.51□□□□□ -1.21
VMA5YKL080W TY1A-AP0CX57 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-PR1P0CX58 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-ORP0CX59 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-PR2P0CX60 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-DR5P0CX65 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-ER2P0CX66 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-GR3P0CX67 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-LR1P0CX68 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-MR2P0CX69 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-JR2P47099 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-DR1Q03856 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-ML1Q04706 440 aaKnown RBP7.51□□□□□ -1.21
VMA5YKL080W RGA2Q06407 1009 aa7.51□□□□□ -1.21
VMA5YKL080W SAS10Q12136 610 aaPredicted RBP7.51□□□□□ -1.21
VMA5YKL080W TY1A-BRQ12217 440 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms