RNA–Protein interactions for RNA: YJL092W

SRS2, Transcript of DNA helicase and DNA-dependent ATPase, yeast

Gene SRS2, Length 3,525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRS2	YJL092W	NOB1	Q08444	459 aa	Known RBP	5.71	□□□□□ -1.5
SRS2	YJL092W	TFC8	Q12308	588 aa		5.7	□□□□□ -1.5
SRS2	YJL092W	NUG1	P40010	520 aa	Known RBP	5.7	□□□□□ -1.5
SRS2	YJL092W	REF2	P42073	533 aa	Predicted RBP	5.7	□□□□□ -1.5
SRS2	YJL092W	ATF2	P53296	535 aa		5.69	□□□□□ -1.5
SRS2	YJL092W	CDC3	P32457	520 aa	Known RBP	5.68	□□□□□ -1.5
SRS2	YJL092W	YJL007C	P47080	104 aa		5.68	□□□□□ -1.5
SRS2	YJL092W	COX6	P00427	148 aa		5.67	□□□□□ -1.5
SRS2	YJL092W	ERG12	P07277	443 aa		5.66	□□□□□ -1.5
SRS2	YJL092W	HO	P09932	586 aa		5.66	□□□□□ -1.5
SRS2	YJL092W	TIF1	P10081	395 aa	Known RBP	5.66	□□□□□ -1.5
SRS2	YJL092W	CPS1	P27614	576 aa		5.66	□□□□□ -1.5
SRS2	YJL092W	TTI1	P36097	1038 aa		5.65	□□□□□ -1.5
SRS2	YJL092W	COQ8	P27697	501 aa		5.65	□□□□□ -1.51
SRS2	YJL092W	MRM1	P25270	412 aa		5.64	□□□□□ -1.51
SRS2	YJL092W	NOP53	Q12080	455 aa	Known RBP	5.64	□□□□□ -1.51
SRS2	YJL092W	TSR3	Q12094	313 aa	Known RBP	5.64	□□□□□ -1.51
SRS2	YJL092W	AAD16	Q02895	342 aa		5.62	□□□□□ -1.51
SRS2	YJL092W	DCD1	P06773	312 aa		5.62	□□□□□ -1.51
SRS2	YJL092W	SSA2	P10592	639 aa	Known RBP	5.62	□□□□□ -1.51
SRS2	YJL092W	YAF9	P53930	226 aa		5.62	□□□□□ -1.51
SRS2	YJL092W	RPL34A	P87262	121 aa	Predicted RBP	5.62	□□□□□ -1.51
SRS2	YJL092W	RTG3	P38165	486 aa		5.62	□□□□□ -1.51
SRS2	YJL092W	ALD4	P46367	519 aa	Known RBP	5.62	□□□□□ -1.51
SRS2	YJL092W	TPO2	P53283	614 aa		5.62	□□□□□ -1.51
SRS2	YJL092W	RTS3	P53289	263 aa		5.62	□□□□□ -1.51
SRS2	YJL092W	ALD2	P47771	506 aa		5.61	□□□□□ -1.51
SRS2	YJL092W	RRP15	Q06511	250 aa	Predicted RBP	5.61	□□□□□ -1.51
SRS2	YJL092W	YJR008W	P47085	338 aa		5.61	□□□□□ -1.51
SRS2	YJL092W	HAT1	Q12341	374 aa		5.61	□□□□□ -1.51
SRS2	YJL092W	CSN12	P47130	423 aa		5.6	□□□□□ -1.51
SRS2	YJL092W	YML083C	Q04526	418 aa		5.6	□□□□□ -1.51
SRS2	YJL092W	FPR4	Q06205	392 aa	Predicted RBP	5.6	□□□□□ -1.51
SRS2	YJL092W	KTR1	P27810	393 aa	Known RBP	5.6	□□□□□ -1.51
SRS2	YJL092W	ASF1	P32447	279 aa		5.6	□□□□□ -1.51
SRS2	YJL092W	BBC1	P47068	1157 aa		5.6	□□□□□ -1.51
SRS2	YJL092W	IPL1	P38991	367 aa		5.59	□□□□□ -1.51
SRS2	YJL092W	PUP1	P25043	261 aa		5.58	□□□□□ -1.52
SRS2	YJL092W	KEX1	P09620	729 aa		5.58	□□□□□ -1.52
SRS2	YJL092W	NMD2	P38798	1089 aa	Known RBP	5.58	□□□□□ -1.52
SRS2	YJL092W	BCH2	P36122	765 aa		5.58	□□□□□ -1.52
SRS2	YJL092W	CST6	P40535	587 aa		5.58	□□□□□ -1.52
SRS2	YJL092W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
SRS2	YJL092W	ITT1	Q04638	464 aa		5.58	□□□□□ -1.52
SRS2	YJL092W	BIO2	P32451	375 aa		5.57	□□□□□ -1.52
SRS2	YJL092W	OSW7	P43611	510 aa		5.57	□□□□□ -1.52
SRS2	YJL092W	SUB1	P54000	292 aa	Known RBP	5.57	□□□□□ -1.52
SRS2	YJL092W	EDS1	P38073	919 aa		5.56	□□□□□ -1.52
SRS2	YJL092W	VPS29	P38759	282 aa		5.56	□□□□□ -1.52
SRS2	YJL092W	GIN4	Q12263	1142 aa		5.56	□□□□□ -1.52
SRS2	YJL092W	YDR090C	Q03193	310 aa		5.56	□□□□□ -1.52
SRS2	YJL092W	UBX5	Q06682	500 aa		5.56	□□□□□ -1.52
SRS2	YJL092W	VPS72	Q03388	795 aa		5.55	□□□□□ -1.52
SRS2	YJL092W	YPR204W	Q08995	1032 aa		5.55	□□□□□ -1.52
SRS2	YJL092W	UBP14	P38237	781 aa	Known RBP	5.55	□□□□□ -1.52
SRS2	YJL092W	RTG2	P32608	588 aa	Known RBP	5.54	□□□□□ -1.52
SRS2	YJL092W	NNF1	P47149	201 aa		5.54	□□□□□ -1.52
SRS2	YJL092W	ATE1	P16639	503 aa		5.53	□□□□□ -1.52
SRS2	YJL092W	RPL34B	P40525	121 aa	Known RBP	5.53	□□□□□ -1.52
SRS2	YJL092W	STM1	P39015	273 aa	Known RBP	5.52	□□□□□ -1.53
SRS2	YJL092W	RNH70	P53331	553 aa		5.52	□□□□□ -1.53
SRS2	YJL092W	FAP1	P53971	965 aa		5.52	□□□□□ -1.53
SRS2	YJL092W	BUD21	Q08492	214 aa	Predicted RBP	5.52	□□□□□ -1.53
SRS2	YJL092W	EPS1	P40557	701 aa		5.52	□□□□□ -1.53
SRS2	YJL092W	MDG1	P53885	366 aa		5.52	□□□□□ -1.53
SRS2	YJL092W	MAG2	Q06436	670 aa	Known RBP	5.51	□□□□□ -1.53
SRS2	YJL092W	SUP45	P12385	437 aa	Known RBP	5.51	□□□□□ -1.53
SRS2	YJL092W	PDR1	P12383	1068 aa		5.51	□□□□□ -1.53
SRS2	YJL092W	MSC6	Q08818	692 aa	Known RBP	5.51	□□□□□ -1.53
SRS2	YJL092W	SVF1	Q05515	481 aa		5.5	□□□□□ -1.53
SRS2	YJL092W	TOM20	P35180	183 aa		5.5	□□□□□ -1.53
SRS2	YJL092W	PSE1	P32337	1089 aa	Known RBP	5.49	□□□□□ -1.53
SRS2	YJL092W	SEC20	P28791	383 aa		5.49	□□□□□ -1.53
SRS2	YJL092W	YBL036C	P38197	257 aa		5.49	□□□□□ -1.53
SRS2	YJL092W	YNL108C	P53929	270 aa		5.49	□□□□□ -1.53
SRS2	YJL092W	MRX10	Q05648	414 aa		5.48	□□□□□ -1.53
SRS2	YJL092W	TYW1	Q08960	810 aa	Known RBP	5.48	□□□□□ -1.53
SRS2	YJL092W	STB3	Q12427	513 aa		5.48	□□□□□ -1.53
SRS2	YJL092W	YOL098C	Q12496	1037 aa		5.48	□□□□□ -1.53
SRS2	YJL092W	YBL113C	Q7M4S9	792 aa		5.48	□□□□□ -1.53
SRS2	YJL092W	CDC27	P38042	758 aa		5.48	□□□□□ -1.53
SRS2	YJL092W	BDF1	P35817	686 aa		5.48	□□□□□ -1.53
SRS2	YJL092W	TRL1	P09880	827 aa	Known RBP	5.47	□□□□□ -1.53
SRS2	YJL092W	ERP5	P38819	212 aa		5.47	□□□□□ -1.53
SRS2	YJL092W	MAK16	P10962	306 aa	Predicted RBP	5.47	□□□□□ -1.53
SRS2	YJL092W	WHI5	Q12416	295 aa		5.47	□□□□□ -1.53
SRS2	YJL092W	MIF2	P35201	549 aa		5.46	□□□□□ -1.54
SRS2	YJL092W	ENO1	P00924	437 aa	Known RBP	5.46	□□□□□ -1.54
SRS2	YJL092W	TGL4	P36165	910 aa		5.46	□□□□□ -1.54
SRS2	YJL092W	CSE4	P36012	229 aa		5.45	□□□□□ -1.54
SRS2	YJL092W	POL32	P47110	350 aa		5.45	□□□□□ -1.54
SRS2	YJL092W	STS1	P38637	319 aa		5.44	□□□□□ -1.54
SRS2	YJL092W	CIT2	P08679	460 aa		5.44	□□□□□ -1.54
SRS2	YJL092W	SIS2	P36024	562 aa		5.44	□□□□□ -1.54
SRS2	YJL092W	PMC1	P38929	1173 aa	Predicted RBP	5.44	□□□□□ -1.54
SRS2	YJL092W	IOC3	P43596	787 aa		5.44	□□□□□ -1.54
SRS2	YJL092W	ZDS1	P50111	915 aa	Known RBP	5.44	□□□□□ -1.54
SRS2	YJL092W	YLR326W	Q06170	240 aa	Known RBP	5.44	□□□□□ -1.54
SRS2	YJL092W	SEC8	P32855	1065 aa		5.43	□□□□□ -1.54
SRS2	YJL092W	PTC3	P34221	468 aa	Known RBP	5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms