RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W HTA2P04912 132 aa6.18□□□□□ -1.42
RPL40AYIL148W ABP1P15891 592 aaKnown RBP6.18□□□□□ -1.42
RPL40AYIL148W PRE3P38624 215 aa6.17□□□□□ -1.42
RPL40AYIL148W PTC4P38089 393 aa6.16□□□□□ -1.42
RPL40AYIL148W YEL023CP39992 682 aa6.16□□□□□ -1.42
RPL40AYIL148W YDR344CQ05510 147 aa6.12□□□□□ -1.43
RPL40AYIL148W VRP1P37370 817 aa6.06□□□□□ -1.44
RPL40AYIL148W PML39Q03760 334 aa6.06□□□□□ -1.44
RPL40AYIL148W XDJ1P39102 459 aa6.04□□□□□ -1.44
RPL40AYIL148W GRE2Q12068 342 aaKnown RBP6.04□□□□□ -1.44
RPL40AYIL148W ELP4Q02884 456 aaKnown RBP6.02□□□□□ -1.45
RPL40AYIL148W MIF2P35201 549 aa6□□□□□ -1.45
RPL40AYIL148W EDS1P38073 919 aa5.98□□□□□ -1.45
RPL40AYIL148W MID1P41821 548 aa5.98□□□□□ -1.45
RPL40AYIL148W ATH1P48016 1211 aa5.97□□□□□ -1.45
RPL40AYIL148W NST1P53935 1240 aa5.97□□□□□ -1.45
RPL40AYIL148W GUT1P32190 709 aa5.96□□□□□ -1.46
RPL40AYIL148W PTC3P34221 468 aaKnown RBP5.96□□□□□ -1.46
RPL40AYIL148W ARH1P48360 493 aa5.96□□□□□ -1.46
RPL40AYIL148W DPS1P04802 557 aaKnown RBP5.95□□□□□ -1.46
RPL40AYIL148W MAK11P20484 414 aaKnown RBP5.94□□□□□ -1.46
RPL40AYIL148W RAM2P29703 316 aa5.94□□□□□ -1.46
RPL40AYIL148W SOL3P38858 249 aa5.92□□□□□ -1.46
RPL40AYIL148W COQ8P27697 501 aa5.88□□□□□ -1.47
RPL40AYIL148W SPT23P35210 1082 aa5.88□□□□□ -1.47
RPL40AYIL148W ILV3P39522 585 aaKnown RBP5.88□□□□□ -1.47
RPL40AYIL148W MPH3P0CE00 602 aa5.87□□□□□ -1.47
RPL40AYIL148W PEX29Q03370 554 aa5.87□□□□□ -1.47
RPL40AYIL148W AI4P03878 556 aa5.86□□□□□ -1.47
RPL40AYIL148W HAP5Q02516 242 aa5.85□□□□□ -1.47
RPL40AYIL148W SRC1Q03707 834 aa5.85□□□□□ -1.47
RPL40AYIL148W BNI4P53858 892 aa5.81□□□□□ -1.48
RPL40AYIL148W MPC54Q08550 464 aa5.8□□□□□ -1.48
RPL40AYIL148W YML082WQ04533 649 aaKnown RBP5.79□□□□□ -1.48
RPL40AYIL148W PTC2P39966 464 aaKnown RBP5.78□□□□□ -1.48
RPL40AYIL148W YGR273CP53329 174 aa5.78□□□□□ -1.48
RPL40AYIL148W NMA111P53920 997 aa5.75□□□□□ -1.49
RPL40AYIL148W RGA2Q06407 1009 aa5.75□□□□□ -1.49
RPL40AYIL148W SLI15P38283 698 aa5.74□□□□□ -1.49
RPL40AYIL148W RAS1P01119 309 aa5.72□□□□□ -1.49
RPL40AYIL148W NOP53Q12080 455 aaKnown RBP5.71□□□□□ -1.5
RPL40AYIL148W YPR015CQ12531 247 aa5.71□□□□□ -1.5
RPL40AYIL148W DPL1Q05567 589 aa5.7□□□□□ -1.5
RPL40AYIL148W RGA1P39083 1007 aa5.69□□□□□ -1.5
RPL40AYIL148W RAM1P22007 431 aa5.67□□□□□ -1.5
RPL40AYIL148W KEX1P09620 729 aa5.63□□□□□ -1.51
RPL40AYIL148W ISU2Q12056 156 aa5.63□□□□□ -1.51
RPL40AYIL148W CDC73Q06697 393 aa5.62□□□□□ -1.51
RPL40AYIL148W GYP1Q08484 637 aa5.6□□□□□ -1.51
RPL40AYIL148W PDR1P12383 1068 aa5.59□□□□□ -1.51
RPL40AYIL148W SDH2P21801 266 aa5.59□□□□□ -1.51
RPL40AYIL148W AMS1P22855 1083 aa5.59□□□□□ -1.51
RPL40AYIL148W TRK1P12685 1235 aa5.57□□□□□ -1.52
RPL40AYIL148W YLR326WQ06170 240 aaKnown RBP5.56□□□□□ -1.52
RPL40AYIL148W UBP14P38237 781 aaKnown RBP5.55□□□□□ -1.52
RPL40AYIL148W VHR2P40041 505 aa5.53□□□□□ -1.52
RPL40AYIL148W PCS60P38137 543 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
RPL40AYIL148W SAS4Q04003 481 aa5.52□□□□□ -1.53
RPL40AYIL148W SET1P38827 1080 aaKnown RBP5.5□□□□□ -1.53
RPL40AYIL148W RAD54P32863 898 aa5.48□□□□□ -1.53
RPL40AYIL148W YEL077CQ3E7X8 1277 aa5.47□□□□□ -1.53
RPL40AYIL148W BUD20Q08004 166 aaPredicted RBP5.46□□□□□ -1.54
RPL40AYIL148W RQC2Q12532 1038 aaKnown RBP5.45□□□□□ -1.54
RPL40AYIL148W YRR1Q12172 810 aa5.43□□□□□ -1.54
RPL40AYIL148W PRT1P06103 763 aaKnown RBP5.42□□□□□ -1.54
RPL40AYIL148W RPP1BP10622 106 aaKnown RBP5.42□□□□□ -1.54
RPL40AYIL148W MRF1P30775 413 aaPredicted RBP5.42□□□□□ -1.54
RPL40AYIL148W STR2P47164 639 aa5.42□□□□□ -1.54
RPL40AYIL148W YDR090CQ03193 310 aa5.42□□□□□ -1.54
RPL40AYIL148W ISM1P48526 1002 aa5.41□□□□□ -1.54
RPL40AYIL148W YPL062WQ02781 134 aa5.41□□□□□ -1.54
RPL40AYIL148W AIR1P40507 360 aaKnown RBP5.4□□□□□ -1.54
RPL40AYIL148W GAP1P19145 602 aaPredicted RBP5.38□□□□□ -1.55
RPL40AYIL148W CST6P40535 587 aa5.38□□□□□ -1.55
RPL40AYIL148W CLA4P48562 842 aa5.38□□□□□ -1.55
RPL40AYIL148W PEX21P50091 288 aa5.38□□□□□ -1.55
RPL40AYIL148W ERG12P07277 443 aa5.37□□□□□ -1.55
RPL40AYIL148W NUD1P32336 851 aa5.36□□□□□ -1.55
RPL40AYIL148W BRE2P43132 505 aa5.36□□□□□ -1.55
RPL40AYIL148W TUM1Q08686 304 aaKnown RBP5.36□□□□□ -1.55
RPL40AYIL148W KIC1P38692 1080 aa5.35□□□□□ -1.55
RPL40AYIL148W CSC1Q06538 782 aa5.34□□□□□ -1.55
RPL40AYIL148W TFB4Q12004 338 aa5.34□□□□□ -1.55
RPL40AYIL148W TY1A-DR4O74302 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-HP0C2I4 478 aaKnown RBP5.33□□□□□ -1.56
RPL40AYIL148W TY1A-AP0CX57 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-PR1P0CX58 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-ORP0CX59 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-PR2P0CX60 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-DR5P0CX65 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-ER2P0CX66 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-GR3P0CX67 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-LR1P0CX68 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-MR2P0CX69 440 aa5.33□□□□□ -1.56
RPL40AYIL148W GAR1P28007 205 aaKnown RBP5.33□□□□□ -1.56
RPL40AYIL148W TY1A-JR2P47099 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-DR1Q03856 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-ML1Q04706 440 aaKnown RBP5.33□□□□□ -1.56
RPL40AYIL148W TY1A-BRQ12217 440 aa5.33□□□□□ -1.56
RPL40AYIL148W TY1A-NL2Q12470 440 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms