RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W XDJ1P39102 459 aa9.67□□□□□ -0.86
PTI1YGR156W DCW1P36091 449 aa9.65□□□□□ -0.86
PTI1YGR156W ABP1P15891 592 aaKnown RBP9.64□□□□□ -0.87
PTI1YGR156W HTA1P04911 132 aaKnown RBP9.63□□□□□ -0.87
PTI1YGR156W HTA2P04912 132 aa9.63□□□□□ -0.87
PTI1YGR156W VRP1P37370 817 aa9.61□□□□□ -0.87
PTI1YGR156W YEL023CP39992 682 aa9.58□□□□□ -0.88
PTI1YGR156W YDR344CQ05510 147 aa9.58□□□□□ -0.88
PTI1YGR156W PTC4P38089 393 aa9.56□□□□□ -0.88
PTI1YGR156W DPS1P04802 557 aaKnown RBP9.55□□□□□ -0.88
PTI1YGR156W RGA1P39083 1007 aa9.48□□□□□ -0.89
PTI1YGR156W GRE2Q12068 342 aaKnown RBP9.46□□□□□ -0.9
PTI1YGR156W MIF2P35201 549 aa9.44□□□□□ -0.9
PTI1YGR156W PML39Q03760 334 aa9.41□□□□□ -0.9
PTI1YGR156W ELP4Q02884 456 aaKnown RBP9.4□□□□□ -0.9
PTI1YGR156W ATH1P48016 1211 aa9.38□□□□□ -0.91
PTI1YGR156W SRC1Q03707 834 aa9.36□□□□□ -0.91
PTI1YGR156W MAK11P20484 414 aaKnown RBP9.35□□□□□ -0.91
PTI1YGR156W EDS1P38073 919 aa9.34□□□□□ -0.91
PTI1YGR156W RAM2P29703 316 aa9.33□□□□□ -0.92
PTI1YGR156W PTC3P34221 468 aaKnown RBP9.33□□□□□ -0.92
PTI1YGR156W GUT1P32190 709 aa9.31□□□□□ -0.92
PTI1YGR156W ARH1P48360 493 aa9.29□□□□□ -0.92
PTI1YGR156W MID1P41821 548 aa9.27□□□□□ -0.93
PTI1YGR156W NST1P53935 1240 aa9.25□□□□□ -0.93
PTI1YGR156W COQ8P27697 501 aa9.24□□□□□ -0.93
PTI1YGR156W PEX29Q03370 554 aa9.22□□□□□ -0.93
PTI1YGR156W SOL3P38858 249 aa9.19□□□□□ -0.94
PTI1YGR156W SPT23P35210 1082 aa9.17□□□□□ -0.94
PTI1YGR156W AI4P03878 556 aa9.13□□□□□ -0.95
PTI1YGR156W MPH3P0CE00 602 aa9.13□□□□□ -0.95
PTI1YGR156W ILV3P39522 585 aaKnown RBP9.13□□□□□ -0.95
PTI1YGR156W HAP5Q02516 242 aa9.09□□□□□ -0.95
PTI1YGR156W BNI4P53858 892 aa9.06□□□□□ -0.96
PTI1YGR156W YGR273CP53329 174 aa9.03□□□□□ -0.96
PTI1YGR156W YML082WQ04533 649 aaKnown RBP9.03□□□□□ -0.96
PTI1YGR156W MPC54Q08550 464 aa9.02□□□□□ -0.97
PTI1YGR156W PTC2P39966 464 aaKnown RBP9.01□□□□□ -0.97
PTI1YGR156W RAS1P01119 309 aa8.96□□□□□ -0.98
PTI1YGR156W SLI15P38283 698 aa8.95□□□□□ -0.98
PTI1YGR156W NMA111P53920 997 aa8.95□□□□□ -0.98
PTI1YGR156W NOP53Q12080 455 aaKnown RBP8.95□□□□□ -0.98
PTI1YGR156W DPL1Q05567 589 aa8.9□□□□□ -0.98
PTI1YGR156W YPR015CQ12531 247 aa8.9□□□□□ -0.98
PTI1YGR156W TRK1P12685 1235 aa8.85□□□□□ -0.99
PTI1YGR156W KEX1P09620 729 aa8.83□□□□□ -1
PTI1YGR156W RAM1P22007 431 aa8.82□□□□□ -1
PTI1YGR156W YPL062WQ02781 134 aa8.8□□□□□ -1
PTI1YGR156W CDC73Q06697 393 aa8.78□□□□□ -1
PTI1YGR156W ISU2Q12056 156 aa8.78□□□□□ -1
PTI1YGR156W AMS1P22855 1083 aa8.75□□□□□ -1.01
PTI1YGR156W SET1P38827 1080 aaKnown RBP8.75□□□□□ -1.01
PTI1YGR156W GYP1Q08484 637 aa8.75□□□□□ -1.01
PTI1YGR156W VHR2P40041 505 aa8.74□□□□□ -1.01
PTI1YGR156W SDH2P21801 266 aa8.73□□□□□ -1.01
PTI1YGR156W YLR326WQ06170 240 aaKnown RBP8.72□□□□□ -1.01
PTI1YGR156W PDR1P12383 1068 aa8.71□□□□□ -1.02
PTI1YGR156W UBP14P38237 781 aaKnown RBP8.69□□□□□ -1.02
PTI1YGR156W RAD54P32863 898 aa8.66□□□□□ -1.02
PTI1YGR156W PCS60P38137 543 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02 RIP-Chip
PTI1YGR156W RPP1BP10622 106 aaKnown RBP8.6□□□□□ -1.03
PTI1YGR156W SAS4Q04003 481 aa8.57□□□□□ -1.04
PTI1YGR156W KIC1P38692 1080 aa8.54□□□□□ -1.04
PTI1YGR156W PEX21P50091 288 aa8.53□□□□□ -1.04
PTI1YGR156W YEL077CQ3E7X8 1277 aa8.53□□□□□ -1.04
PTI1YGR156W IFH1P39520 1085 aa8.52□□□□□ -1.05
PTI1YGR156W YRR1Q12172 810 aa8.52□□□□□ -1.05
PTI1YGR156W YDR090CQ03193 310 aa8.5□□□□□ -1.05
PTI1YGR156W BUD20Q08004 166 aaPredicted RBP8.49□□□□□ -1.05
PTI1YGR156W MRF1P30775 413 aaPredicted RBP8.48□□□□□ -1.05
PTI1YGR156W PRT1P06103 763 aaKnown RBP8.46□□□□□ -1.06
PTI1YGR156W GAR1P28007 205 aaKnown RBP8.45□□□□□ -1.06
PTI1YGR156W STR2P47164 639 aa8.45□□□□□ -1.06
PTI1YGR156W TUM1Q08686 304 aaKnown RBP8.44□□□□□ -1.06
PTI1YGR156W GBP2P25555 427 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
PTI1YGR156W BRE2P43132 505 aa8.43□□□□□ -1.06
PTI1YGR156W ISM1P48526 1002 aa8.43□□□□□ -1.06
PTI1YGR156W NUD1P32336 851 aa8.42□□□□□ -1.06
PTI1YGR156W AIR1P40507 360 aaKnown RBP8.41□□□□□ -1.06
PTI1YGR156W ERG12P07277 443 aa8.4□□□□□ -1.06
PTI1YGR156W CSC1Q06538 782 aa8.4□□□□□ -1.06
PTI1YGR156W TFB4Q12004 338 aa8.4□□□□□ -1.06
PTI1YGR156W REF2P42073 533 aaPredicted RBP8.39□□□□□ -1.07
PTI1YGR156W GAP1P19145 602 aaPredicted RBP8.38□□□□□ -1.07
PTI1YGR156W NPL4P33755 580 aa8.38□□□□□ -1.07
PTI1YGR156W CLA4P48562 842 aa8.38□□□□□ -1.07
PTI1YGR156W GCR2Q01722 534 aa8.37□□□□□ -1.07
PTI1YGR156W CST6P40535 587 aa8.36□□□□□ -1.07
PTI1YGR156W GCD11P32481 527 aaKnown RBP8.35□□□□□ -1.07
PTI1YGR156W ORC6P38826 435 aa8.33□□□□□ -1.08
PTI1YGR156W YPR148CQ06523 435 aa8.32□□□□□ -1.08
PTI1YGR156W SPT16P32558 1035 aaKnown RBP8.31□□□□□ -1.08
PTI1YGR156W TY1A-DR4O74302 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-HP0C2I4 478 aaKnown RBP8.3□□□□□ -1.08
PTI1YGR156W TY1A-AP0CX57 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-PR1P0CX58 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-ORP0CX59 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-PR2P0CX60 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-DR5P0CX65 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-ER2P0CX66 440 aa8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms