RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W HTA1P04911 132 aaKnown RBP8.08□□□□□ -1.12
PEX4YGR133W HTA2P04912 132 aa8.08□□□□□ -1.12
PEX4YGR133W ABP1P15891 592 aaKnown RBP8.08□□□□□ -1.12
PEX4YGR133W YEL023CP39992 682 aa8.06□□□□□ -1.12
PEX4YGR133W PTC4P38089 393 aa8.05□□□□□ -1.12
PEX4YGR133W YDR344CQ05510 147 aa8.01□□□□□ -1.13
PEX4YGR133W VRP1P37370 817 aa7.98□□□□□ -1.13
PEX4YGR133W XDJ1P39102 459 aa7.94□□□□□ -1.14
PEX4YGR133W PML39Q03760 334 aa7.93□□□□□ -1.14
PEX4YGR133W ELP4Q02884 456 aaKnown RBP7.91□□□□□ -1.14
PEX4YGR133W GRE2Q12068 342 aaKnown RBP7.88□□□□□ -1.15
PEX4YGR133W DPS1P04802 557 aaKnown RBP7.84□□□□□ -1.15
PEX4YGR133W MIF2P35201 549 aa7.8□□□□□ -1.16
PEX4YGR133W MID1P41821 548 aa7.8□□□□□ -1.16
PEX4YGR133W ARH1P48360 493 aa7.79□□□□□ -1.16
PEX4YGR133W ATH1P48016 1211 aa7.78□□□□□ -1.16
PEX4YGR133W EDS1P38073 919 aa7.76□□□□□ -1.17
PEX4YGR133W GUT1P32190 709 aa7.75□□□□□ -1.17
PEX4YGR133W PTC3P34221 468 aaKnown RBP7.75□□□□□ -1.17
PEX4YGR133W NST1P53935 1240 aa7.74□□□□□ -1.17
PEX4YGR133W SPT23P35210 1082 aa7.71□□□□□ -1.18
PEX4YGR133W PEX29Q03370 554 aa7.71□□□□□ -1.18
PEX4YGR133W MAK11P20484 414 aaKnown RBP7.7□□□□□ -1.18
PEX4YGR133W SOL3P38858 249 aa7.69□□□□□ -1.18
PEX4YGR133W RAM2P29703 316 aa7.68□□□□□ -1.18
PEX4YGR133W SRC1Q03707 834 aa7.68□□□□□ -1.18
PEX4YGR133W MPH3P0CE00 602 aa7.64□□□□□ -1.19
PEX4YGR133W ILV3P39522 585 aaKnown RBP7.64□□□□□ -1.19
PEX4YGR133W HAP5Q02516 242 aa7.64□□□□□ -1.19
PEX4YGR133W AI4P03878 556 aa7.63□□□□□ -1.19
PEX4YGR133W RGA2Q06407 1009 aa7.62□□□□□ -1.19
PEX4YGR133W COQ8P27697 501 aa7.61□□□□□ -1.19
PEX4YGR133W BNI4P53858 892 aa7.59□□□□□ -1.19
PEX4YGR133W PTC2P39966 464 aaKnown RBP7.58□□□□□ -1.2
PEX4YGR133W YML082WQ04533 649 aaKnown RBP7.57□□□□□ -1.2
PEX4YGR133W MPC54Q08550 464 aa7.56□□□□□ -1.2
PEX4YGR133W RGA1P39083 1007 aa7.52□□□□□ -1.21
PEX4YGR133W YGR273CP53329 174 aa7.51□□□□□ -1.21
PEX4YGR133W RAS1P01119 309 aa7.5□□□□□ -1.21
PEX4YGR133W NMA111P53920 997 aa7.5□□□□□ -1.21
PEX4YGR133W SLI15P38283 698 aa7.46□□□□□ -1.22
PEX4YGR133W YPR015CQ12531 247 aa7.45□□□□□ -1.22
PEX4YGR133W DPL1Q05567 589 aa7.44□□□□□ -1.22
PEX4YGR133W RAM1P22007 431 aa7.37□□□□□ -1.23
PEX4YGR133W NOP53Q12080 455 aaKnown RBP7.37□□□□□ -1.23
PEX4YGR133W GYP1Q08484 637 aa7.34□□□□□ -1.23
PEX4YGR133W TRK1P12685 1235 aa7.33□□□□□ -1.24
PEX4YGR133W AMS1P22855 1083 aa7.33□□□□□ -1.24
PEX4YGR133W ISU2Q12056 156 aa7.33□□□□□ -1.24
PEX4YGR133W KEX1P09620 729 aa7.31□□□□□ -1.24
PEX4YGR133W CDC73Q06697 393 aa7.31□□□□□ -1.24
PEX4YGR133W PDR1P12383 1068 aa7.28□□□□□ -1.24
PEX4YGR133W SDH2P21801 266 aa7.27□□□□□ -1.25
PEX4YGR133W SAS4Q04003 481 aa7.2□□□□□ -1.26
PEX4YGR133W YLR326WQ06170 240 aaKnown RBP7.19□□□□□ -1.26
PEX4YGR133W UBP14P38237 781 aaKnown RBP7.17□□□□□ -1.26
PEX4YGR133W VHR2P40041 505 aa7.17□□□□□ -1.26
PEX4YGR133W YEL077CQ3E7X8 1277 aa7.17□□□□□ -1.26
PEX4YGR133W PCS60P38137 543 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
PEX4YGR133W YPL062WQ02781 134 aa7.14□□□□□ -1.27
PEX4YGR133W RAD54P32863 898 aa7.11□□□□□ -1.27
PEX4YGR133W BUD20Q08004 166 aaPredicted RBP7.1□□□□□ -1.27
PEX4YGR133W MRF1P30775 413 aaPredicted RBP7.09□□□□□ -1.27
PEX4YGR133W SET1P38827 1080 aaKnown RBP7.07□□□□□ -1.28
PEX4YGR133W PRT1P06103 763 aaKnown RBP7.06□□□□□ -1.28
PEX4YGR133W RPP1BP10622 106 aaKnown RBP7.06□□□□□ -1.28
PEX4YGR133W AIR1P40507 360 aaKnown RBP7.06□□□□□ -1.28
PEX4YGR133W YRR1Q12172 810 aa7.06□□□□□ -1.28
PEX4YGR133W BRE2P43132 505 aa7.04□□□□□ -1.28
PEX4YGR133W STR2P47164 639 aa7.04□□□□□ -1.28
PEX4YGR133W CLA4P48562 842 aa7.03□□□□□ -1.28
PEX4YGR133W GAR1P28007 205 aaKnown RBP7.02□□□□□ -1.29
PEX4YGR133W ISM1P48526 1002 aa7.02□□□□□ -1.29
PEX4YGR133W ERG12P07277 443 aa7.01□□□□□ -1.29
PEX4YGR133W CST6P40535 587 aa7.01□□□□□ -1.29
PEX4YGR133W PEX21P50091 288 aa7□□□□□ -1.29
PEX4YGR133W GBP2P25555 427 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PEX4YGR133W YDR090CQ03193 310 aa6.98□□□□□ -1.29
PEX4YGR133W NUD1P32336 851 aa6.97□□□□□ -1.29
PEX4YGR133W GCR2Q01722 534 aa6.97□□□□□ -1.29
PEX4YGR133W TUM1Q08686 304 aaKnown RBP6.96□□□□□ -1.3
PEX4YGR133W KIC1P38692 1080 aa6.95□□□□□ -1.3
PEX4YGR133W GAP1P19145 602 aaPredicted RBP6.94□□□□□ -1.3
PEX4YGR133W LAM6Q08001 693 aa6.93□□□□□ -1.3
PEX4YGR133W TFB4Q12004 338 aa6.92□□□□□ -1.3
PEX4YGR133W TY1A-DR4O74302 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-HP0C2I4 478 aaKnown RBP6.91□□□□□ -1.3
PEX4YGR133W TY1A-AP0CX57 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-PR1P0CX58 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-ORP0CX59 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-PR2P0CX60 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-DR5P0CX65 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-ER2P0CX66 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-GR3P0CX67 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-LR1P0CX68 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-MR2P0CX69 440 aa6.91□□□□□ -1.3
PEX4YGR133W GCD11P32481 527 aaKnown RBP6.91□□□□□ -1.3
PEX4YGR133W NPL4P33755 580 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-JR2P47099 440 aa6.91□□□□□ -1.3
PEX4YGR133W FRK1Q03002 865 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms