RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C TY1B-MR2Q04670 1755 aaKnown RBP15.21■□□□□ 0.02
CCA1YER168C TY1B-LR1Q12088 1755 aaKnown RBP15.21■□□□□ 0.02
CCA1YER168C TY1B-NL1Q12112 1755 aa15.21■□□□□ 0.02
CCA1YER168C TY1B-GR1Q12141 1755 aa15.21■□□□□ 0.02
CCA1YER168C TY1B-BLQ12490 1755 aa15.21■□□□□ 0.02
CCA1YER168C ESC1Q03661 1658 aaKnown RBP15.19■□□□□ 0.02
CCA1YER168C DNF1P32660 1571 aa15.07■□□□□ 0
CCA1YER168C RPA190P10964 1664 aaKnown RBP15.06■□□□□ 0
CCA1YER168C YBT1P32386 1661 aa15.06■□□□□ 0
CCA1YER168C NTE1Q04958 1679 aa15.06■□□□□ 0
CCA1YER168C IRC20Q06554 1556 aa15.06■□□□□ 0
CCA1YER168C GEA2P39993 1459 aaKnown RBP15.05■□□□□ -0
CCA1YER168C VPS15P22219 1454 aa15.04■□□□□ -0
CCA1YER168C RPO21P04050 1733 aaKnown RBP15.02■□□□□ -0
CCA1YER168C CAT8P39113 1433 aa14.97□□□□□ -0.01
CCA1YER168C RTT106P40161 455 aa14.97□□□□□ -0.01
CCA1YER168C NUP159P40477 1460 aa14.9□□□□□ -0.02
CCA1YER168C GDB1Q06625 1536 aa14.88□□□□□ -0.03
CCA1YER168C ARO1P08566 1588 aaKnown RBP14.84□□□□□ -0.03
CCA1YER168C PDR10P51533 1564 aa14.83□□□□□ -0.04
CCA1YER168C MTC1P47018 478 aaKnown RBP14.82□□□□□ -0.04
CCA1YER168C SRB8P25648 1427 aa14.82□□□□□ -0.04
CCA1YER168C PDR12Q02785 1511 aa14.81□□□□□ -0.04
CCA1YER168C SPO14P36126 1683 aa14.76□□□□□ -0.05
CCA1YER168C YRF1-1P0CX20 1796 aa14.73□□□□□ -0.05
CCA1YER168C YRF1-5P0CX21 1796 aa14.73□□□□□ -0.05
CCA1YER168C YRF1-8P0CX22 1796 aa14.73□□□□□ -0.05
CCA1YER168C MET10P39692 1035 aa14.72□□□□□ -0.05
CCA1YER168C NUP157P40064 1391 aaKnown RBP14.72□□□□□ -0.05
CCA1YER168C CKB1P43639 278 aa14.7□□□□□ -0.06
CCA1YER168C GCN2P15442 1659 aa14.69□□□□□ -0.06
CCA1YER168C NSR1P27476 414 aaKnown RBP RIP-Chip data14.67□□□□□ -0.06not detected
CCA1YER168C POL5P39985 1022 aaKnown RBP14.67□□□□□ -0.06
CCA1YER168C BUD3P25558 1636 aa14.65□□□□□ -0.06
CCA1YER168C MET5P47169 1442 aa14.65□□□□□ -0.06
CCA1YER168C YSP2Q06681 1438 aa14.63□□□□□ -0.07
CCA1YER168C MMS1Q06211 1407 aa14.59□□□□□ -0.07
CCA1YER168C BUD21Q08492 214 aaPredicted RBP14.57□□□□□ -0.08
CCA1YER168C IQG1Q12280 1495 aa14.57□□□□□ -0.08
CCA1YER168C PDR5P33302 1511 aaKnown RBP14.5□□□□□ -0.09
CCA1YER168C NOP7P53261 605 aaKnown RBP14.47□□□□□ -0.09
CCA1YER168C YOR093CQ12275 1648 aa14.45□□□□□ -0.1
CCA1YER168C SEC3P33332 1336 aaKnown RBP14.41□□□□□ -0.1
CCA1YER168C ENP1P38333 483 aaKnown RBP14.41□□□□□ -0.1
CCA1YER168C BNR1P40450 1375 aa14.41□□□□□ -0.1
CCA1YER168C SPT7P35177 1332 aa14.4□□□□□ -0.1
CCA1YER168C LTE1P07866 1435 aa14.37□□□□□ -0.11
CCA1YER168C CHC1P22137 1653 aaKnown RBP14.37□□□□□ -0.11
CCA1YER168C SEC7P11075 2009 aaKnown RBP14.36□□□□□ -0.11
CCA1YER168C PAF1P38351 445 aa14.34□□□□□ -0.11
CCA1YER168C BFR2Q06631 534 aaKnown RBP14.32□□□□□ -0.12
CCA1YER168C NOP2P40991 618 aaKnown RBP14.31□□□□□ -0.12
CCA1YER168C VMR1P38735 1592 aa14.27□□□□□ -0.12
CCA1YER168C PDR11P40550 1411 aa14.27□□□□□ -0.12
CCA1YER168C MHP1P43638 1398 aa14.26□□□□□ -0.13
CCA1YER168C RAV1P47104 1357 aa14.26□□□□□ -0.13
CCA1YER168C TY3B-IQ7LHG5 1498 aaKnown RBP14.24□□□□□ -0.13
CCA1YER168C DOP1Q03921 1698 aa14.24□□□□□ -0.13
CCA1YER168C TRM3Q07527 1436 aa14.24□□□□□ -0.13
CCA1YER168C ORC1P54784 914 aaPredicted RBP14.21□□□□□ -0.13
CCA1YER168C RTC1Q08281 1341 aa14.21□□□□□ -0.13
CCA1YER168C NUP188P52593 1655 aaKnown RBP14.19□□□□□ -0.14
CCA1YER168C IML1P47170 1584 aa14.18□□□□□ -0.14
CCA1YER168C PSD2P53037 1138 aaKnown RBP14.14□□□□□ -0.15
CCA1YER168C DRS2P39524 1355 aa14.14□□□□□ -0.15
CCA1YER168C LEU3P08638 886 aa14.12□□□□□ -0.15
CCA1YER168C TAF5P38129 798 aa14.11□□□□□ -0.15
CCA1YER168C YLR419WQ06698 1435 aaKnown RBP14.1□□□□□ -0.15
CCA1YER168C NUP192P47054 1683 aa14.1□□□□□ -0.15
CCA1YER168C PRS1P32895 427 aaKnown RBP14.07□□□□□ -0.16
CCA1YER168C DNF2Q12675 1612 aa14.07□□□□□ -0.16
CCA1YER168C ESL2P36168 1195 aa14.04□□□□□ -0.16
CCA1YER168C KIP3P53086 805 aaKnown RBP14.03□□□□□ -0.16
CCA1YER168C PDS5Q04264 1277 aa14.03□□□□□ -0.16
CCA1YER168C BNI1P41832 1953 aa13.95□□□□□ -0.18
CCA1YER168C TYS1P36421 394 aaKnown RBP13.94□□□□□ -0.18
CCA1YER168C NST1P53935 1240 aa13.94□□□□□ -0.18
CCA1YER168C ITT1Q04638 464 aa13.94□□□□□ -0.18
CCA1YER168C IPL1P38991 367 aa13.92□□□□□ -0.18
CCA1YER168C SPE2P21182 396 aa13.9□□□□□ -0.18
CCA1YER168C YAP3P38749 330 aa13.86□□□□□ -0.19
CCA1YER168C BCK1Q01389 1478 aa13.86□□□□□ -0.19
CCA1YER168C URN1Q06525 465 aaKnown RBP13.85□□□□□ -0.19
CCA1YER168C SCT1P32784 759 aa13.83□□□□□ -0.2
CCA1YER168C RAD9P14737 1309 aa13.83□□□□□ -0.2
CCA1YER168C ALD4P46367 519 aaKnown RBP13.81□□□□□ -0.2
CCA1YER168C TAF8Q03750 510 aa13.81□□□□□ -0.2
CCA1YER168C RTG3P38165 486 aa13.77□□□□□ -0.21
CCA1YER168C HAP1P0CE41 1502 aa13.74□□□□□ -0.21
CCA1YER168C FKH1P40466 484 aa13.73□□□□□ -0.21
CCA1YER168C CAB1Q04430 367 aa13.73□□□□□ -0.21
CCA1YER168C MLP1Q02455 1875 aaKnown RBP13.73□□□□□ -0.21
CCA1YER168C CHZ1P40019 153 aaPredicted RBP13.72□□□□□ -0.21
CCA1YER168C CFT1Q06632 1357 aaKnown RBP13.68□□□□□ -0.22
CCA1YER168C YML133CQ03099 1374 aa13.67□□□□□ -0.22
CCA1YER168C YLL067CQ07888 1374 aa13.67□□□□□ -0.22
CCA1YER168C YLL066CQ99208 1374 aa13.67□□□□□ -0.22
CCA1YER168C RPP0P05317 312 aaKnown RBP13.65□□□□□ -0.22
CCA1YER168C YEF3P16521 1044 aaKnown RBP13.65□□□□□ -0.22
CCA1YER168C NAP1P25293 417 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms