RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W TY1B-ER2Q03619 1755 aa5.16□□□□□ -1.58
CHD1YER164W TY1B-MR1Q04214 1755 aa5.16□□□□□ -1.58
CHD1YER164W TY1B-MR2Q04670 1755 aaKnown RBP5.16□□□□□ -1.58
CHD1YER164W TY1B-LR1Q12088 1755 aaKnown RBP5.16□□□□□ -1.58
CHD1YER164W TY1B-NL1Q12112 1755 aa5.16□□□□□ -1.58
CHD1YER164W TY1B-GR1Q12141 1755 aa5.16□□□□□ -1.58
CHD1YER164W TY1B-BLQ12490 1755 aa5.16□□□□□ -1.58
CHD1YER164W TY3B-GQ99315 1547 aa5.16□□□□□ -1.58
CHD1YER164W CKB1P43639 278 aa5.15□□□□□ -1.59
CHD1YER164W SNT2P53127 1403 aa5.14□□□□□ -1.59
CHD1YER164W MNN4P36044 1178 aa5.14□□□□□ -1.59
CHD1YER164W BFR2Q06631 534 aaKnown RBP5.14□□□□□ -1.59
CHD1YER164W GDB1Q06625 1536 aa5.12□□□□□ -1.59
CHD1YER164W RPA190P10964 1664 aaKnown RBP5.12□□□□□ -1.59
CHD1YER164W VPS15P22219 1454 aa5.1□□□□□ -1.59
CHD1YER164W NUP159P40477 1460 aa5.09□□□□□ -1.59
CHD1YER164W BUD3P25558 1636 aa5.09□□□□□ -1.6
CHD1YER164W CAB3P36076 571 aa5.07□□□□□ -1.6
CHD1YER164W MET10P39692 1035 aa5.07□□□□□ -1.6
CHD1YER164W NTE1Q04958 1679 aa5.06□□□□□ -1.6
CHD1YER164W ORC1P54784 914 aaPredicted RBP5.06□□□□□ -1.6
CHD1YER164W YBT1P32386 1661 aa5.06□□□□□ -1.6
CHD1YER164W NUP157P40064 1391 aaKnown RBP5.06□□□□□ -1.6
CHD1YER164W YRF1-1P0CX20 1796 aa5.05□□□□□ -1.6
CHD1YER164W YRF1-5P0CX21 1796 aa5.05□□□□□ -1.6
CHD1YER164W YRF1-8P0CX22 1796 aa5.05□□□□□ -1.6
CHD1YER164W NUP170P38181 1502 aa5.05□□□□□ -1.6
CHD1YER164W GEA2P39993 1459 aaKnown RBP5.05□□□□□ -1.6
CHD1YER164W RPO21P04050 1733 aaKnown RBP5.05□□□□□ -1.6
CHD1YER164W ARO1P08566 1588 aaKnown RBP5.04□□□□□ -1.6
CHD1YER164W PDR10P51533 1564 aa5.03□□□□□ -1.6
CHD1YER164W SPO14P36126 1683 aa5.03□□□□□ -1.6
CHD1YER164W IRC20Q06554 1556 aa5.03□□□□□ -1.6
CHD1YER164W BUD21Q08492 214 aaPredicted RBP5.01□□□□□ -1.61
CHD1YER164W YSP2Q06681 1438 aa5□□□□□ -1.61
CHD1YER164W SRB8P25648 1427 aa4.99□□□□□ -1.61
CHD1YER164W NSR1P27476 414 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
CHD1YER164W LEU3P08638 886 aa4.98□□□□□ -1.61
CHD1YER164W CAT8P39113 1433 aa4.98□□□□□ -1.61
CHD1YER164W IQG1Q12280 1495 aa4.97□□□□□ -1.61
CHD1YER164W MET5P47169 1442 aa4.97□□□□□ -1.61
CHD1YER164W PDR12Q02785 1511 aa4.96□□□□□ -1.62
CHD1YER164W ITT1Q04638 464 aa4.95□□□□□ -1.62
CHD1YER164W POL5P39985 1022 aaKnown RBP4.94□□□□□ -1.62
CHD1YER164W BNR1P40450 1375 aa4.93□□□□□ -1.62
CHD1YER164W SPT7P35177 1332 aa4.92□□□□□ -1.62
CHD1YER164W NOP7P53261 605 aaKnown RBP4.92□□□□□ -1.62
CHD1YER164W PDR11P40550 1411 aa4.92□□□□□ -1.62
CHD1YER164W TYS1P36421 394 aaKnown RBP4.91□□□□□ -1.62
CHD1YER164W TFA1P36100 482 aa4.9□□□□□ -1.62
CHD1YER164W SEC7P11075 2009 aaKnown RBP4.9□□□□□ -1.62
CHD1YER164W AIM44Q99299 758 aa4.9□□□□□ -1.62
CHD1YER164W TAF5P38129 798 aa4.89□□□□□ -1.63
CHD1YER164W PDR5P33302 1511 aaKnown RBP4.89□□□□□ -1.63
CHD1YER164W ENP1P38333 483 aaKnown RBP4.88□□□□□ -1.63
CHD1YER164W NST1P53935 1240 aa4.88□□□□□ -1.63
CHD1YER164W PSD2P53037 1138 aaKnown RBP4.88□□□□□ -1.63
CHD1YER164W EAF7P53911 425 aaKnown RBP4.88□□□□□ -1.63
CHD1YER164W LTE1P07866 1435 aa4.88□□□□□ -1.63
CHD1YER164W FPR3P38911 411 aaKnown RBP4.87□□□□□ -1.63
CHD1YER164W DRS2P39524 1355 aa4.86□□□□□ -1.63
CHD1YER164W PAF1P38351 445 aa4.85□□□□□ -1.63
CHD1YER164W KIP3P53086 805 aaKnown RBP4.85□□□□□ -1.63
CHD1YER164W DOP1Q03921 1698 aa4.85□□□□□ -1.63
CHD1YER164W GCN2P15442 1659 aa4.85□□□□□ -1.63
CHD1YER164W MMS1Q06211 1407 aa4.85□□□□□ -1.63
CHD1YER164W BNI1P41832 1953 aa4.84□□□□□ -1.63
CHD1YER164W VMR1P38735 1592 aa4.84□□□□□ -1.63
CHD1YER164W EBP2P36049 427 aaKnown RBP4.83□□□□□ -1.64
CHD1YER164W FUN12P39730 1002 aaKnown RBP4.82□□□□□ -1.64
CHD1YER164W YOR093CQ12275 1648 aa4.82□□□□□ -1.64
CHD1YER164W AVT3P36062 692 aa4.82□□□□□ -1.64
CHD1YER164W DNF2Q12675 1612 aa4.82□□□□□ -1.64
CHD1YER164W IPL1P38991 367 aa4.81□□□□□ -1.64
CHD1YER164W CAB1Q04430 367 aa4.8□□□□□ -1.64
CHD1YER164W RAD9P14737 1309 aa4.8□□□□□ -1.64
CHD1YER164W YAP3P38749 330 aa4.8□□□□□ -1.64
CHD1YER164W RAV1P47104 1357 aa4.79□□□□□ -1.64
CHD1YER164W SEC3P33332 1336 aaKnown RBP4.79□□□□□ -1.64
CHD1YER164W RTC1Q08281 1341 aa4.79□□□□□ -1.64
CHD1YER164W TAF8Q03750 510 aa4.79□□□□□ -1.64
CHD1YER164W QCR6P00127 147 aa4.79□□□□□ -1.64
CHD1YER164W PDS5Q04264 1277 aa4.79□□□□□ -1.64
CHD1YER164W CHC1P22137 1653 aaKnown RBP4.79□□□□□ -1.64
CHD1YER164W IML1P47170 1584 aa4.77□□□□□ -1.65
CHD1YER164W SPE2P21182 396 aa4.77□□□□□ -1.65
CHD1YER164W NUP192P47054 1683 aa4.77□□□□□ -1.65
CHD1YER164W LEO1P38439 464 aa4.77□□□□□ -1.65
CHD1YER164W RTG3P38165 486 aa4.77□□□□□ -1.65
CHD1YER164W KRE5P22023 1365 aa4.76□□□□□ -1.65
CHD1YER164W SCT1P32784 759 aa4.75□□□□□ -1.65
CHD1YER164W CHZ1P40019 153 aaPredicted RBP4.75□□□□□ -1.65
CHD1YER164W YLR419WQ06698 1435 aaKnown RBP4.75□□□□□ -1.65
CHD1YER164W ESL2P36168 1195 aa4.75□□□□□ -1.65
CHD1YER164W NUP188P52593 1655 aaKnown RBP4.75□□□□□ -1.65
CHD1YER164W PRS1P32895 427 aaKnown RBP4.75□□□□□ -1.65
CHD1YER164W MHP1P43638 1398 aa4.74□□□□□ -1.65
CHD1YER164W ALD4P46367 519 aaKnown RBP4.74□□□□□ -1.65
CHD1YER164W RNA1P11745 407 aaKnown RBP4.73□□□□□ -1.65
CHD1YER164W TRM3Q07527 1436 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms