RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W PTC4P38089 393 aa7.04□□□□□ -1.28
YCK3YER123W CST9Q06032 482 aa7.04□□□□□ -1.28
YCK3YER123W DCW1P36091 449 aa7.01□□□□□ -1.29
YCK3YER123W XDJ1P39102 459 aa7.01□□□□□ -1.29
YCK3YER123W YEL023CP39992 682 aa7.01□□□□□ -1.29
YCK3YER123W MGA2P40578 1113 aa7.01□□□□□ -1.29
YCK3YER123W VRP1P37370 817 aa6.98□□□□□ -1.29
YCK3YER123W RCR1P38212 213 aa6.95□□□□□ -1.3
YCK3YER123W ELP4Q02884 456 aaKnown RBP6.91□□□□□ -1.3
YCK3YER123W DPS1P04802 557 aaKnown RBP6.9□□□□□ -1.31
YCK3YER123W PML39Q03760 334 aa6.89□□□□□ -1.31
YCK3YER123W YDR344CQ05510 147 aa6.86□□□□□ -1.31
YCK3YER123W GRE2Q12068 342 aaKnown RBP6.84□□□□□ -1.31
YCK3YER123W ARH1P48360 493 aa6.82□□□□□ -1.32
YCK3YER123W ATH1P48016 1211 aa6.76□□□□□ -1.33
YCK3YER123W GUT1P32190 709 aa6.75□□□□□ -1.33
YCK3YER123W SPT23P35210 1082 aa6.75□□□□□ -1.33
YCK3YER123W MID1P41821 548 aa6.74□□□□□ -1.33
YCK3YER123W PEX29Q03370 554 aa6.72□□□□□ -1.33
YCK3YER123W MIF2P35201 549 aa6.71□□□□□ -1.34
YCK3YER123W SRC1Q03707 834 aa6.7□□□□□ -1.34
YCK3YER123W PTC3P34221 468 aaKnown RBP6.69□□□□□ -1.34
YCK3YER123W RGA1P39083 1007 aa6.69□□□□□ -1.34
YCK3YER123W NST1P53935 1240 aa6.68□□□□□ -1.34
YCK3YER123W HAP5Q02516 242 aa6.68□□□□□ -1.34
YCK3YER123W MAK11P20484 414 aaKnown RBP6.65□□□□□ -1.34
YCK3YER123W BNI4P53858 892 aa6.65□□□□□ -1.34
YCK3YER123W AI4P03878 556 aa6.65□□□□□ -1.35
YCK3YER123W EDS1P38073 919 aa6.65□□□□□ -1.35
YCK3YER123W YML082WQ04533 649 aaKnown RBP6.65□□□□□ -1.35
YCK3YER123W MPH3P0CE00 602 aa6.64□□□□□ -1.35
YCK3YER123W PTC2P39966 464 aaKnown RBP6.63□□□□□ -1.35
YCK3YER123W SOL3P38858 249 aa6.61□□□□□ -1.35
YCK3YER123W COQ8P27697 501 aa6.56□□□□□ -1.36
YCK3YER123W RAM2P29703 316 aa6.56□□□□□ -1.36
YCK3YER123W MPC54Q08550 464 aa6.56□□□□□ -1.36
YCK3YER123W ILV3P39522 585 aaKnown RBP6.55□□□□□ -1.36
YCK3YER123W RAS1P01119 309 aa6.51□□□□□ -1.37
YCK3YER123W NMA111P53920 997 aa6.51□□□□□ -1.37
YCK3YER123W YGR273CP53329 174 aa6.48□□□□□ -1.37
YCK3YER123W DPL1Q05567 589 aa6.46□□□□□ -1.38
YCK3YER123W TRK1P12685 1235 aa6.45□□□□□ -1.38
YCK3YER123W NOP53Q12080 455 aaKnown RBP6.45□□□□□ -1.38
YCK3YER123W SLI15P38283 698 aa6.44□□□□□ -1.38
YCK3YER123W AMS1P22855 1083 aa6.42□□□□□ -1.38
YCK3YER123W YPR015CQ12531 247 aa6.42□□□□□ -1.38
YCK3YER123W GYP1Q08484 637 aa6.41□□□□□ -1.38
YCK3YER123W RAM1P22007 431 aa6.4□□□□□ -1.39
YCK3YER123W ISU2Q12056 156 aa6.4□□□□□ -1.39
YCK3YER123W SAS4Q04003 481 aa6.35□□□□□ -1.39
YCK3YER123W YPL062WQ02781 134 aa6.31□□□□□ -1.4
YCK3YER123W YEL077CQ3E7X8 1277 aa6.31□□□□□ -1.4
YCK3YER123W KEX1P09620 729 aa6.3□□□□□ -1.4
YCK3YER123W SDH2P21801 266 aa6.29□□□□□ -1.4
YCK3YER123W CDC73Q06697 393 aa6.28□□□□□ -1.4
YCK3YER123W PDR1P12383 1068 aa6.26□□□□□ -1.41
YCK3YER123W MRF1P30775 413 aaPredicted RBP6.26□□□□□ -1.41
YCK3YER123W RPP1BP10622 106 aaKnown RBP6.21□□□□□ -1.42
YCK3YER123W YLR326WQ06170 240 aaKnown RBP6.18□□□□□ -1.42
YCK3YER123W BRE2P43132 505 aa6.18□□□□□ -1.42
YCK3YER123W GCR2Q01722 534 aa6.18□□□□□ -1.42
YCK3YER123W GBP2P25555 427 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
YCK3YER123W UBP14P38237 781 aaKnown RBP6.16□□□□□ -1.42
YCK3YER123W PRT1P06103 763 aaKnown RBP6.15□□□□□ -1.42
YCK3YER123W GAR1P28007 205 aaKnown RBP6.15□□□□□ -1.42
YCK3YER123W ERG12P07277 443 aa6.14□□□□□ -1.43
YCK3YER123W RAD54P32863 898 aa6.14□□□□□ -1.43
YCK3YER123W PCS60P38137 543 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
YCK3YER123W BUD20Q08004 166 aaPredicted RBP6.14□□□□□ -1.43
YCK3YER123W VHR2P40041 505 aa6.14□□□□□ -1.43
YCK3YER123W AIR1P40507 360 aaKnown RBP6.1□□□□□ -1.43
YCK3YER123W YRR1Q12172 810 aa6.09□□□□□ -1.43
YCK3YER123W PEX21P50091 288 aa6.08□□□□□ -1.44
YCK3YER123W CST6P40535 587 aa6.06□□□□□ -1.44
YCK3YER123W STR2P47164 639 aa6.06□□□□□ -1.44
YCK3YER123W SET1P38827 1080 aaKnown RBP6.06□□□□□ -1.44
YCK3YER123W ISM1P48526 1002 aa6.05□□□□□ -1.44
YCK3YER123W CLA4P48562 842 aa6.05□□□□□ -1.44
YCK3YER123W NUD1P32336 851 aa6.03□□□□□ -1.44
YCK3YER123W LAM6Q08001 693 aa6.03□□□□□ -1.44
YCK3YER123W TFB4Q12004 338 aa6.03□□□□□ -1.44
YCK3YER123W CDC4P07834 779 aa6.01□□□□□ -1.45
YCK3YER123W NPL4P33755 580 aa6.01□□□□□ -1.45
YCK3YER123W KIC1P38692 1080 aa6.01□□□□□ -1.45
YCK3YER123W CSC1Q06538 782 aa6.01□□□□□ -1.45
YCK3YER123W SPT16P32558 1035 aaKnown RBP6.01□□□□□ -1.45
YCK3YER123W GAP1P19145 602 aaPredicted RBP6□□□□□ -1.45
YCK3YER123W MET22P32179 357 aa6□□□□□ -1.45
YCK3YER123W TUM1Q08686 304 aaKnown RBP6□□□□□ -1.45
YCK3YER123W ENV9Q08651 330 aa5.99□□□□□ -1.45
YCK3YER123W YDR090CQ03193 310 aa5.98□□□□□ -1.45
YCK3YER123W GCD11P32481 527 aaKnown RBP5.97□□□□□ -1.45
YCK3YER123W FRK1Q03002 865 aaPredicted RBP5.97□□□□□ -1.45
YCK3YER123W IFH1P39520 1085 aa5.96□□□□□ -1.46
YCK3YER123W TY1A-DR4O74302 440 aa5.94□□□□□ -1.46
YCK3YER123W TY1A-HP0C2I4 478 aaKnown RBP5.94□□□□□ -1.46
YCK3YER123W TY1A-AP0CX57 440 aa5.94□□□□□ -1.46
YCK3YER123W TY1A-PR1P0CX58 440 aa5.94□□□□□ -1.46
YCK3YER123W TY1A-ORP0CX59 440 aa5.94□□□□□ -1.46
YCK3YER123W TY1A-PR2P0CX60 440 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms