RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A XDJ1P39102 459 aa6.18□□□□□ -1.42
YER088C-AYER088C-A YEL023CP39992 682 aa6.17□□□□□ -1.42
YER088C-AYER088C-A CST9Q06032 482 aa6.17□□□□□ -1.42
YER088C-AYER088C-A MGA2P40578 1113 aa6.16□□□□□ -1.42
YER088C-AYER088C-A DCW1P36091 449 aa6.14□□□□□ -1.43
YER088C-AYER088C-A VRP1P37370 817 aa6.13□□□□□ -1.43
YER088C-AYER088C-A DPS1P04802 557 aaKnown RBP6.08□□□□□ -1.44
YER088C-AYER088C-A RCR1P38212 213 aa6.08□□□□□ -1.44
YER088C-AYER088C-A ELP4Q02884 456 aaKnown RBP6.08□□□□□ -1.44
YER088C-AYER088C-A PML39Q03760 334 aa6.05□□□□□ -1.44
YER088C-AYER088C-A YDR344CQ05510 147 aa6.02□□□□□ -1.45
YER088C-AYER088C-A RGA2Q06407 1009 aa6.02□□□□□ -1.45
YER088C-AYER088C-A GRE2Q12068 342 aaKnown RBP6.02□□□□□ -1.45
YER088C-AYER088C-A ARH1P48360 493 aa6□□□□□ -1.45
YER088C-AYER088C-A SPT23P35210 1082 aa5.95□□□□□ -1.46
YER088C-AYER088C-A ATH1P48016 1211 aa5.95□□□□□ -1.46
YER088C-AYER088C-A GUT1P32190 709 aa5.94□□□□□ -1.46
YER088C-AYER088C-A PEX29Q03370 554 aa5.93□□□□□ -1.46
YER088C-AYER088C-A SRC1Q03707 834 aa5.92□□□□□ -1.46
YER088C-AYER088C-A RGA1P39083 1007 aa5.91□□□□□ -1.46
YER088C-AYER088C-A MID1P41821 548 aa5.9□□□□□ -1.46
YER088C-AYER088C-A MIF2P35201 549 aa5.89□□□□□ -1.47
YER088C-AYER088C-A PTC3P34221 468 aaKnown RBP5.88□□□□□ -1.47
YER088C-AYER088C-A HAP5Q02516 242 aa5.88□□□□□ -1.47
YER088C-AYER088C-A MAK11P20484 414 aaKnown RBP5.87□□□□□ -1.47
YER088C-AYER088C-A BNI4P53858 892 aa5.87□□□□□ -1.47
YER088C-AYER088C-A NST1P53935 1240 aa5.87□□□□□ -1.47
YER088C-AYER088C-A AI4P03878 556 aa5.86□□□□□ -1.47
YER088C-AYER088C-A YML082WQ04533 649 aaKnown RBP5.85□□□□□ -1.47
YER088C-AYER088C-A MPH3P0CE00 602 aa5.84□□□□□ -1.47
YER088C-AYER088C-A PTC2P39966 464 aaKnown RBP5.84□□□□□ -1.47
YER088C-AYER088C-A EDS1P38073 919 aa5.83□□□□□ -1.48
YER088C-AYER088C-A SOL3P38858 249 aa5.8□□□□□ -1.48
YER088C-AYER088C-A MPC54Q08550 464 aa5.77□□□□□ -1.49
YER088C-AYER088C-A COQ8P27697 501 aa5.76□□□□□ -1.49
YER088C-AYER088C-A RAM2P29703 316 aa5.75□□□□□ -1.49
YER088C-AYER088C-A ILV3P39522 585 aaKnown RBP5.75□□□□□ -1.49
YER088C-AYER088C-A NMA111P53920 997 aa5.71□□□□□ -1.5
YER088C-AYER088C-A RAS1P01119 309 aa5.7□□□□□ -1.5
YER088C-AYER088C-A YGR273CP53329 174 aa5.7□□□□□ -1.5
YER088C-AYER088C-A TRK1P12685 1235 aa5.69□□□□□ -1.5
YER088C-AYER088C-A DPL1Q05567 589 aa5.69□□□□□ -1.5
YER088C-AYER088C-A NOP53Q12080 455 aaKnown RBP5.69□□□□□ -1.5
YER088C-AYER088C-A AMS1P22855 1083 aa5.66□□□□□ -1.5
YER088C-AYER088C-A SLI15P38283 698 aa5.66□□□□□ -1.5
YER088C-AYER088C-A YPR015CQ12531 247 aa5.65□□□□□ -1.5
YER088C-AYER088C-A GYP1Q08484 637 aa5.63□□□□□ -1.51
YER088C-AYER088C-A RAM1P22007 431 aa5.62□□□□□ -1.51
YER088C-AYER088C-A ISU2Q12056 156 aa5.62□□□□□ -1.51
YER088C-AYER088C-A SAS4Q04003 481 aa5.6□□□□□ -1.51
YER088C-AYER088C-A YPL062WQ02781 134 aa5.58□□□□□ -1.52
YER088C-AYER088C-A YEL077CQ3E7X8 1277 aa5.57□□□□□ -1.52
YER088C-AYER088C-A KEX1P09620 729 aa5.54□□□□□ -1.52
YER088C-AYER088C-A SDH2P21801 266 aa5.53□□□□□ -1.52
YER088C-AYER088C-A MRF1P30775 413 aaPredicted RBP5.52□□□□□ -1.53
YER088C-AYER088C-A CDC73Q06697 393 aa5.51□□□□□ -1.53
YER088C-AYER088C-A RPP1BP10622 106 aaKnown RBP5.49□□□□□ -1.53
YER088C-AYER088C-A PDR1P12383 1068 aa5.48□□□□□ -1.53
YER088C-AYER088C-A BRE2P43132 505 aa5.46□□□□□ -1.54
YER088C-AYER088C-A GCR2Q01722 534 aa5.45□□□□□ -1.54
YER088C-AYER088C-A GBP2P25555 427 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
YER088C-AYER088C-A YLR326WQ06170 240 aaKnown RBP5.43□□□□□ -1.54
YER088C-AYER088C-A PRT1P06103 763 aaKnown RBP5.4□□□□□ -1.54
YER088C-AYER088C-A ERG12P07277 443 aa5.4□□□□□ -1.54
YER088C-AYER088C-A GAR1P28007 205 aaKnown RBP5.4□□□□□ -1.54
YER088C-AYER088C-A RAD54P32863 898 aa5.4□□□□□ -1.54
YER088C-AYER088C-A UBP14P38237 781 aaKnown RBP5.4□□□□□ -1.54
YER088C-AYER088C-A BUD20Q08004 166 aaPredicted RBP5.39□□□□□ -1.55
YER088C-AYER088C-A PCS60P38137 543 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
YER088C-AYER088C-A VHR2P40041 505 aa5.38□□□□□ -1.55
YER088C-AYER088C-A AIR1P40507 360 aaKnown RBP5.36□□□□□ -1.55
YER088C-AYER088C-A PEX21P50091 288 aa5.35□□□□□ -1.55
YER088C-AYER088C-A YRR1Q12172 810 aa5.34□□□□□ -1.55
YER088C-AYER088C-A CST6P40535 587 aa5.33□□□□□ -1.56
YER088C-AYER088C-A STR2P47164 639 aa5.33□□□□□ -1.56
YER088C-AYER088C-A SET1P38827 1080 aaKnown RBP5.31□□□□□ -1.56
YER088C-AYER088C-A ISM1P48526 1002 aa5.31□□□□□ -1.56
YER088C-AYER088C-A CLA4P48562 842 aa5.31□□□□□ -1.56
YER088C-AYER088C-A LAM6Q08001 693 aa5.31□□□□□ -1.56
YER088C-AYER088C-A TFB4Q12004 338 aa5.31□□□□□ -1.56
YER088C-AYER088C-A CDC4P07834 779 aa5.3□□□□□ -1.56
YER088C-AYER088C-A NUD1P32336 851 aa5.3□□□□□ -1.56
YER088C-AYER088C-A KIC1P38692 1080 aa5.3□□□□□ -1.56
YER088C-AYER088C-A CSC1Q06538 782 aa5.3□□□□□ -1.56
YER088C-AYER088C-A NPL4P33755 580 aa5.29□□□□□ -1.56
YER088C-AYER088C-A ENV9Q08651 330 aa5.29□□□□□ -1.56
YER088C-AYER088C-A GAP1P19145 602 aaPredicted RBP5.28□□□□□ -1.56
YER088C-AYER088C-A SPT16P32558 1035 aaKnown RBP5.28□□□□□ -1.56
YER088C-AYER088C-A MET22P32179 357 aa5.27□□□□□ -1.57
YER088C-AYER088C-A FRK1Q03002 865 aaPredicted RBP5.26□□□□□ -1.57
YER088C-AYER088C-A TUM1Q08686 304 aaKnown RBP5.26□□□□□ -1.57
YER088C-AYER088C-A IFH1P39520 1085 aa5.25□□□□□ -1.57
YER088C-AYER088C-A YDR090CQ03193 310 aa5.25□□□□□ -1.57
YER088C-AYER088C-A TY1A-DR4O74302 440 aa5.23□□□□□ -1.57
YER088C-AYER088C-A TY1A-HP0C2I4 478 aaKnown RBP5.23□□□□□ -1.57
YER088C-AYER088C-A TY1A-AP0CX57 440 aa5.23□□□□□ -1.57
YER088C-AYER088C-A TY1A-PR1P0CX58 440 aa5.23□□□□□ -1.57
YER088C-AYER088C-A TY1A-ORP0CX59 440 aa5.23□□□□□ -1.57
YER088C-AYER088C-A TY1A-PR2P0CX60 440 aa5.23□□□□□ -1.57
YER088C-AYER088C-A TY1A-DR5P0CX65 440 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms