RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	EDS1	P38073	919 aa		4.76	□□□□□ -1.65
SMT3	YDR510W	MRX12	P47084	519 aa		4.76	□□□□□ -1.65
SMT3	YDR510W	ATG32	P40458	529 aa		4.75	□□□□□ -1.65
SMT3	YDR510W	YJL007C	P47080	104 aa		4.75	□□□□□ -1.65
SMT3	YDR510W	SLD2	P34252	453 aa		4.74	□□□□□ -1.65
SMT3	YDR510W	SNU71	P53207	620 aa	Known RBP	4.74	□□□□□ -1.65
SMT3	YDR510W	RPL34B	P40525	121 aa	Known RBP	4.72	□□□□□ -1.65
SMT3	YDR510W	CSN12	P47130	423 aa		4.72	□□□□□ -1.65
SMT3	YDR510W	PRY3	P47033	881 aa		4.71	□□□□□ -1.66
SMT3	YDR510W	TIF1	P10081	395 aa	Known RBP	4.7	□□□□□ -1.66
SMT3	YDR510W	CPS1	P27614	576 aa		4.7	□□□□□ -1.66
SMT3	YDR510W	UBP14	P38237	781 aa	Known RBP	4.7	□□□□□ -1.66
SMT3	YDR510W	STS1	P38637	319 aa		4.7	□□□□□ -1.66
SMT3	YDR510W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
SMT3	YDR510W	YDR090C	Q03193	310 aa		4.7	□□□□□ -1.66
SMT3	YDR510W	ERG12	P07277	443 aa		4.69	□□□□□ -1.66
SMT3	YDR510W	VHR2	P40041	505 aa		4.69	□□□□□ -1.66
SMT3	YDR510W	RPL34A	P87262	121 aa	Predicted RBP	4.69	□□□□□ -1.66
SMT3	YDR510W	CDC3	P32457	520 aa	Known RBP	4.68	□□□□□ -1.66
SMT3	YDR510W	PTC3	P34221	468 aa	Known RBP	4.68	□□□□□ -1.66
SMT3	YDR510W	TTI1	P36097	1038 aa		4.68	□□□□□ -1.66
SMT3	YDR510W	PAM1	P37304	830 aa	Known RBP	4.68	□□□□□ -1.66
SMT3	YDR510W	SSF1	P38789	453 aa	Predicted RBP	4.68	□□□□□ -1.66
SMT3	YDR510W	YPR204W	Q08995	1032 aa		4.68	□□□□□ -1.66
SMT3	YDR510W	PSE1	P32337	1089 aa	Known RBP	4.67	□□□□□ -1.66
SMT3	YDR510W	MET10	P39692	1035 aa		4.67	□□□□□ -1.66
SMT3	YDR510W	YFR006W	P43590	535 aa		4.67	□□□□□ -1.66
SMT3	YDR510W	SCY1	P53009	804 aa		4.67	□□□□□ -1.66
SMT3	YDR510W	DBP1	P24784	617 aa	Known RBP	4.66	□□□□□ -1.66
SMT3	YDR510W	KTR1	P27810	393 aa	Known RBP	4.66	□□□□□ -1.66
SMT3	YDR510W	BIO2	P32451	375 aa		4.66	□□□□□ -1.66
SMT3	YDR510W	YBL036C	P38197	257 aa		4.66	□□□□□ -1.66
SMT3	YDR510W	SEN54	Q02825	467 aa	Predicted RBP	4.66	□□□□□ -1.66
SMT3	YDR510W	NOB1	Q08444	459 aa	Known RBP	4.66	□□□□□ -1.66
SMT3	YDR510W	RRN6	P32786	894 aa		4.65	□□□□□ -1.67
SMT3	YDR510W	HEM3	P28789	327 aa		4.64	□□□□□ -1.67
SMT3	YDR510W	RTG2	P32608	588 aa	Known RBP	4.64	□□□□□ -1.67
SMT3	YDR510W	KIC1	P38692	1080 aa		4.64	□□□□□ -1.67
SMT3	YDR510W	YLR326W	Q06170	240 aa	Known RBP	4.64	□□□□□ -1.67
SMT3	YDR510W	TYW1	Q08960	810 aa	Known RBP	4.63	□□□□□ -1.67
SMT3	YDR510W	TEA1	P47988	759 aa		4.62	□□□□□ -1.67
SMT3	YDR510W	YML083C	Q04526	418 aa		4.61	□□□□□ -1.67
SMT3	YDR510W	HAT1	Q12341	374 aa		4.61	□□□□□ -1.67
SMT3	YDR510W	PUP1	P25043	261 aa		4.6	□□□□□ -1.67
SMT3	YDR510W	YNL108C	P53929	270 aa		4.6	□□□□□ -1.67
SMT3	YDR510W	YTA7	P40340	1379 aa		4.6	□□□□□ -1.67
SMT3	YDR510W	RAD54	P32863	898 aa		4.59	□□□□□ -1.67
SMT3	YDR510W	ORC6	P38826	435 aa		4.59	□□□□□ -1.67
SMT3	YDR510W	YOR238W	Q08634	303 aa		4.59	□□□□□ -1.67
SMT3	YDR510W	CSE4	P36012	229 aa		4.58	□□□□□ -1.68
SMT3	YDR510W	SIS2	P36024	562 aa		4.58	□□□□□ -1.68
SMT3	YDR510W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SMT3	YDR510W	ATH1	P48016	1211 aa		4.58	□□□□□ -1.68
SMT3	YDR510W	ASF1	P32447	279 aa		4.57	□□□□□ -1.68
SMT3	YDR510W	YGR273C	P53329	174 aa		4.57	□□□□□ -1.68
SMT3	YDR510W	ITT1	Q04638	464 aa		4.57	□□□□□ -1.68
SMT3	YDR510W	RAD59	Q12223	238 aa		4.57	□□□□□ -1.68
SMT3	YDR510W	ENO1	P00924	437 aa	Known RBP	4.56	□□□□□ -1.68
SMT3	YDR510W	KEX1	P09620	729 aa		4.56	□□□□□ -1.68
SMT3	YDR510W	SUP45	P12385	437 aa	Known RBP	4.56	□□□□□ -1.68
SMT3	YDR510W	CLB5	P30283	435 aa		4.56	□□□□□ -1.68
SMT3	YDR510W	GUT1	P32190	709 aa		4.56	□□□□□ -1.68
SMT3	YDR510W	BRN1	P38170	754 aa		4.56	□□□□□ -1.68
SMT3	YDR510W	MAP2	P38174	421 aa	Known RBP	4.56	□□□□□ -1.68
SMT3	YDR510W	UBP10	P53874	792 aa	Predicted RBP	4.56	□□□□□ -1.68
SMT3	YDR510W	PKH3	Q03306	898 aa	Predicted RBP	4.56	□□□□□ -1.68
SMT3	YDR510W	GRE2	Q12068	342 aa	Known RBP	4.56	□□□□□ -1.68
SMT3	YDR510W	OCA5	P38738	679 aa		4.55	□□□□□ -1.68
SMT3	YDR510W	IPL1	P38991	367 aa		4.55	□□□□□ -1.68
SMT3	YDR510W	STM1	P39015	273 aa	Known RBP	4.55	□□□□□ -1.68
SMT3	YDR510W	HST2	P53686	357 aa		4.55	□□□□□ -1.68
SMT3	YDR510W	NIS1	P53939	407 aa		4.55	□□□□□ -1.68
SMT3	YDR510W	ENO2	P00925	437 aa	Known RBP	4.54	□□□□□ -1.68
SMT3	YDR510W	RGR1	P19263	1082 aa		4.54	□□□□□ -1.68
SMT3	YDR510W	ESS1	P22696	170 aa		4.54	□□□□□ -1.68
SMT3	YDR510W	SLX5	P32828	619 aa	Known RBP	4.54	□□□□□ -1.68
SMT3	YDR510W	FPK1	P53739	893 aa		4.54	□□□□□ -1.68
SMT3	YDR510W	YMR196W	Q04336	1088 aa		4.54	□□□□□ -1.68
SMT3	YDR510W	MRX10	Q05648	414 aa		4.54	□□□□□ -1.68
SMT3	YDR510W	MMP1	Q12372	583 aa		4.54	□□□□□ -1.68
SMT3	YDR510W	VMA1	P17255	1071 aa	Known RBP	4.53	□□□□□ -1.68
SMT3	YDR510W	SPT5	P27692	1063 aa	Known RBP	4.53	□□□□□ -1.68
SMT3	YDR510W	SEC20	P28791	383 aa		4.53	□□□□□ -1.68
SMT3	YDR510W	TGL4	P36165	910 aa		4.53	□□□□□ -1.68
SMT3	YDR510W	YDJ1	P25491	409 aa	Known RBP	4.52	□□□□□ -1.69
SMT3	YDR510W	YJU3	P28321	313 aa		4.52	□□□□□ -1.69
SMT3	YDR510W	ALD2	P47771	506 aa		4.52	□□□□□ -1.69
SMT3	YDR510W	RIM21	P48565	533 aa		4.52	□□□□□ -1.69
SMT3	YDR510W	DOS2	P54858	310 aa		4.52	□□□□□ -1.69
SMT3	YDR510W	YBL113C	Q7M4S9	792 aa		4.52	□□□□□ -1.69
SMT3	YDR510W	TOP1	P04786	769 aa		4.51	□□□□□ -1.69
SMT3	YDR510W	ARG8	P18544	423 aa		4.51	□□□□□ -1.69
SMT3	YDR510W	SCJ1	P25303	377 aa		4.51	□□□□□ -1.69
SMT3	YDR510W	SPC42	P36094	363 aa		4.51	□□□□□ -1.69
SMT3	YDR510W	MVP1	P40959	511 aa	Known RBP	4.51	□□□□□ -1.69
SMT3	YDR510W	PIB1	Q06651	286 aa		4.51	□□□□□ -1.69
SMT3	YDR510W	ERP5	P38819	212 aa		4.5	□□□□□ -1.69
SMT3	YDR510W	SOL3	P38858	249 aa		4.5	□□□□□ -1.69
SMT3	YDR510W	YCK3	P39962	524 aa		4.5	□□□□□ -1.69
SMT3	YDR510W	RRP15	Q06511	250 aa	Predicted RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms