RNA–Protein interactions for RNA: YDR450W

RPS18A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS18A, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS18A	YDR450W	TIF4632	P39936	914 aa	Known RBP	5.11	□□□□□ -1.59
RPS18A	YDR450W	DOS2	P54858	310 aa		5.11	□□□□□ -1.59
RPS18A	YDR450W	MET10	P39692	1035 aa		5.1	□□□□□ -1.59
RPS18A	YDR450W	IES2	P40154	320 aa		5.1	□□□□□ -1.59
RPS18A	YDR450W	TGL3	P40308	642 aa		5.09	□□□□□ -1.59
RPS18A	YDR450W	RPL34A	P87262	121 aa	Predicted RBP	5.09	□□□□□ -1.59
RPS18A	YDR450W	SIS2	P36024	562 aa		5.08	□□□□□ -1.6
RPS18A	YDR450W	RTG3	P38165	486 aa		5.08	□□□□□ -1.6
RPS18A	YDR450W	NUP42	P49686	430 aa	Known RBP	5.08	□□□□□ -1.6
RPS18A	YDR450W	COX6	P00427	148 aa		5.07	□□□□□ -1.6
RPS18A	YDR450W	CDC3	P32457	520 aa	Known RBP	5.07	□□□□□ -1.6
RPS18A	YDR450W	MRX12	P47084	519 aa		5.07	□□□□□ -1.6
RPS18A	YDR450W	FPR4	Q06205	392 aa	Predicted RBP	5.07	□□□□□ -1.6
RPS18A	YDR450W	YTA7	P40340	1379 aa		5.06	□□□□□ -1.6
RPS18A	YDR450W	RPL34B	P40525	121 aa	Known RBP	5.06	□□□□□ -1.6
RPS18A	YDR450W	TFB3	Q03290	321 aa		5.06	□□□□□ -1.6
RPS18A	YDR450W	SVF1	Q05515	481 aa		5.06	□□□□□ -1.6
RPS18A	YDR450W	DIT2	P21595	489 aa		5.03	□□□□□ -1.6
RPS18A	YDR450W	SEC20	P28791	383 aa		5.02	□□□□□ -1.61
RPS18A	YDR450W	PAM1	P37304	830 aa	Known RBP	5.02	□□□□□ -1.61
RPS18A	YDR450W	SUB1	P54000	292 aa	Known RBP	5.02	□□□□□ -1.61
RPS18A	YDR450W	COQ8	P27697	501 aa		5.01	□□□□□ -1.61
RPS18A	YDR450W	BRN1	P38170	754 aa		5.01	□□□□□ -1.61
RPS18A	YDR450W	STM1	P39015	273 aa	Known RBP	5.01	□□□□□ -1.61
RPS18A	YDR450W	SSF1	P38789	453 aa	Predicted RBP	5	□□□□□ -1.61
RPS18A	YDR450W	CSN12	P47130	423 aa		5	□□□□□ -1.61
RPS18A	YDR450W	BUD31	P25337	157 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS18A	YDR450W	CSE4	P36012	229 aa		4.99	□□□□□ -1.61
RPS18A	YDR450W	NMD2	P38798	1089 aa	Known RBP	4.99	□□□□□ -1.61
RPS18A	YDR450W	PSE1	P32337	1089 aa	Known RBP	4.98	□□□□□ -1.61
RPS18A	YDR450W	RRN6	P32786	894 aa		4.98	□□□□□ -1.61
RPS18A	YDR450W	BIM1	P40013	344 aa		4.98	□□□□□ -1.61
RPS18A	YDR450W	MRM1	P25270	412 aa		4.97	□□□□□ -1.61
RPS18A	YDR450W	YJL007C	P47080	104 aa		4.97	□□□□□ -1.61
RPS18A	YDR450W	NNF1	P47149	201 aa		4.97	□□□□□ -1.61
RPS18A	YDR450W	ITT1	Q04638	464 aa		4.97	□□□□□ -1.61
RPS18A	YDR450W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	RIP-Chip
RPS18A	YDR450W	SPT5	P27692	1063 aa	Known RBP	4.95	□□□□□ -1.62
RPS18A	YDR450W	CLB5	P30283	435 aa		4.95	□□□□□ -1.62
RPS18A	YDR450W	YAF9	P53930	226 aa		4.95	□□□□□ -1.62
RPS18A	YDR450W	UBP14	P38237	781 aa	Known RBP	4.94	□□□□□ -1.62
RPS18A	YDR450W	OCA5	P38738	679 aa		4.94	□□□□□ -1.62
RPS18A	YDR450W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RPS18A	YDR450W	NOP2	P40991	618 aa	Known RBP	4.94	□□□□□ -1.62
RPS18A	YDR450W	SEN54	Q02825	467 aa	Predicted RBP	4.94	□□□□□ -1.62
RPS18A	YDR450W	VPS72	Q03388	795 aa		4.94	□□□□□ -1.62
RPS18A	YDR450W	TIF1	P10081	395 aa	Known RBP	4.93	□□□□□ -1.62
RPS18A	YDR450W	GLN1	P32288	370 aa	Known RBP	4.93	□□□□□ -1.62
RPS18A	YDR450W	YBL036C	P38197	257 aa		4.93	□□□□□ -1.62
RPS18A	YDR450W	KIC1	P38692	1080 aa		4.93	□□□□□ -1.62
RPS18A	YDR450W	FAR11	P53917	953 aa		4.93	□□□□□ -1.62
RPS18A	YDR450W	URN1	Q06525	465 aa	Known RBP	4.93	□□□□□ -1.62
RPS18A	YDR450W	KEX1	P09620	729 aa		4.92	□□□□□ -1.62
RPS18A	YDR450W	SPC42	P36094	363 aa		4.92	□□□□□ -1.62
RPS18A	YDR450W	TTI1	P36097	1038 aa		4.92	□□□□□ -1.62
RPS18A	YDR450W	FPR3	P38911	411 aa	Known RBP	4.92	□□□□□ -1.62
RPS18A	YDR450W	NUG1	P40010	520 aa	Known RBP	4.92	□□□□□ -1.62
RPS18A	YDR450W	ATG32	P40458	529 aa		4.92	□□□□□ -1.62
RPS18A	YDR450W	OSW7	P43611	510 aa		4.92	□□□□□ -1.62
RPS18A	YDR450W	MAK16	P10962	306 aa	Predicted RBP	4.91	□□□□□ -1.62
RPS18A	YDR450W	PKC1	P24583	1151 aa		4.91	□□□□□ -1.62
RPS18A	YDR450W	MST1	P07236	462 aa		4.9	□□□□□ -1.63
RPS18A	YDR450W	RTG2	P32608	588 aa	Known RBP	4.9	□□□□□ -1.63
RPS18A	YDR450W	RRP14	P36080	434 aa	Known RBP	4.9	□□□□□ -1.63
RPS18A	YDR450W	RCR1	P38212	213 aa		4.9	□□□□□ -1.63
RPS18A	YDR450W	YAP5	P40574	245 aa		4.9	□□□□□ -1.63
RPS18A	YDR450W	YPP1	P46951	817 aa		4.9	□□□□□ -1.63
RPS18A	YDR450W	YOR238W	Q08634	303 aa		4.9	□□□□□ -1.63
RPS18A	YDR450W	MIF2	P35201	549 aa		4.89	□□□□□ -1.63
RPS18A	YDR450W	TEA1	P47988	759 aa		4.89	□□□□□ -1.63
RPS18A	YDR450W	RTS3	P53289	263 aa		4.89	□□□□□ -1.63
RPS18A	YDR450W	NOB1	Q08444	459 aa	Known RBP	4.89	□□□□□ -1.63
RPS18A	YDR450W	HAT1	Q12341	374 aa		4.89	□□□□□ -1.63
RPS18A	YDR450W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RPS18A	YDR450W	YGL081W	P53156	320 aa		4.88	□□□□□ -1.63
RPS18A	YDR450W	CPS1	P27614	576 aa		4.87	□□□□□ -1.63
RPS18A	YDR450W	UBP9	P39967	754 aa		4.87	□□□□□ -1.63
RPS18A	YDR450W	SPT2	P06843	333 aa	Predicted RBP	4.86	□□□□□ -1.63
RPS18A	YDR450W	YJL049W	P47048	450 aa		4.86	□□□□□ -1.63
RPS18A	YDR450W	YPR204W	Q08995	1032 aa		4.86	□□□□□ -1.63
RPS18A	YDR450W	RPP1B	P10622	106 aa	Known RBP	4.85	□□□□□ -1.63
RPS18A	YDR450W	VPS29	P38759	282 aa		4.85	□□□□□ -1.63
RPS18A	YDR450W	MSC6	Q08818	692 aa	Known RBP	4.85	□□□□□ -1.63
RPS18A	YDR450W	MNN4	P36044	1178 aa		4.84	□□□□□ -1.63
RPS18A	YDR450W	PPX1	P38698	397 aa		4.84	□□□□□ -1.63
RPS18A	YDR450W	SUP45	P12385	437 aa	Known RBP	4.83	□□□□□ -1.64
RPS18A	YDR450W	PTC3	P34221	468 aa	Known RBP	4.83	□□□□□ -1.64
RPS18A	YDR450W	MGE1	P38523	228 aa		4.83	□□□□□ -1.64
RPS18A	YDR450W	HST2	P53686	357 aa		4.83	□□□□□ -1.64
RPS18A	YDR450W	PUP1	P25043	261 aa		4.82	□□□□□ -1.64
RPS18A	YDR450W	TFG1	P41895	735 aa	Predicted RBP	4.82	□□□□□ -1.64
RPS18A	YDR450W	YDR090C	Q03193	310 aa		4.82	□□□□□ -1.64
RPS18A	YDR450W	BIO2	P32451	375 aa		4.81	□□□□□ -1.64
RPS18A	YDR450W	RAD54	P32863	898 aa		4.81	□□□□□ -1.64
RPS18A	YDR450W	EDS1	P38073	919 aa		4.81	□□□□□ -1.64
RPS18A	YDR450W	CST6	P40535	587 aa		4.81	□□□□□ -1.64
RPS18A	YDR450W	NAF1	P53919	492 aa	Known RBP	4.81	□□□□□ -1.64
RPS18A	YDR450W	YMR196W	Q04336	1088 aa		4.81	□□□□□ -1.64
RPS18A	YDR450W	PUF6	Q04373	656 aa	Known RBP	4.81	□□□□□ -1.64
RPS18A	YDR450W	TOM20	P35180	183 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms