RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A YEL023CP39992 682 aa9.49□□□□□ -0.89
YDR170W-AYDR170W-A DCW1P36091 449 aa9.46□□□□□ -0.9
YDR170W-AYDR170W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
YDR170W-AYDR170W-A DPS1P04802 557 aaKnown RBP9.44□□□□□ -0.9
YDR170W-AYDR170W-A CST9Q06032 482 aa9.44□□□□□ -0.9
YDR170W-AYDR170W-A YDR344CQ05510 147 aa9.41□□□□□ -0.9
YDR170W-AYDR170W-A SSP1P38871 571 aa9.37□□□□□ -0.91
YDR170W-AYDR170W-A RCR1P38212 213 aa9.35□□□□□ -0.91
YDR170W-AYDR170W-A ELP4Q02884 456 aaKnown RBP9.35□□□□□ -0.91
YDR170W-AYDR170W-A MGA2P40578 1113 aa9.31□□□□□ -0.92
YDR170W-AYDR170W-A PML39Q03760 334 aa9.31□□□□□ -0.92
YDR170W-AYDR170W-A TFA1P36100 482 aa9.28□□□□□ -0.92
YDR170W-AYDR170W-A RGA1P39083 1007 aa9.28□□□□□ -0.92
YDR170W-AYDR170W-A SRC1Q03707 834 aa9.26□□□□□ -0.93
YDR170W-AYDR170W-A ARH1P48360 493 aa9.24□□□□□ -0.93
YDR170W-AYDR170W-A GRE2Q12068 342 aaKnown RBP9.19□□□□□ -0.94
YDR170W-AYDR170W-A SPT23P35210 1082 aa9.13□□□□□ -0.95
YDR170W-AYDR170W-A MID1P41821 548 aa9.12□□□□□ -0.95
YDR170W-AYDR170W-A ATH1P48016 1211 aa9.05□□□□□ -0.96
YDR170W-AYDR170W-A NST1P53935 1240 aa9.05□□□□□ -0.96
YDR170W-AYDR170W-A PEX29Q03370 554 aa9.05□□□□□ -0.96
YDR170W-AYDR170W-A GUT1P32190 709 aa9.04□□□□□ -0.96
YDR170W-AYDR170W-A HAP5Q02516 242 aa9.02□□□□□ -0.97
YDR170W-AYDR170W-A BNI4P53858 892 aa9□□□□□ -0.97
YDR170W-AYDR170W-A YML082WQ04533 649 aaKnown RBP8.99□□□□□ -0.97
YDR170W-AYDR170W-A PTC3P34221 468 aaKnown RBP8.97□□□□□ -0.97
YDR170W-AYDR170W-A MIF2P35201 549 aa8.97□□□□□ -0.97
YDR170W-AYDR170W-A PTC2P39966 464 aaKnown RBP8.95□□□□□ -0.98
YDR170W-AYDR170W-A AI4P03878 556 aa8.93□□□□□ -0.98
YDR170W-AYDR170W-A MPH3P0CE00 602 aa8.93□□□□□ -0.98
YDR170W-AYDR170W-A EDS1P38073 919 aa8.93□□□□□ -0.98
YDR170W-AYDR170W-A SOL3P38858 249 aa8.93□□□□□ -0.98
YDR170W-AYDR170W-A RAS1P01119 309 aa8.88□□□□□ -0.99
YDR170W-AYDR170W-A MAK11P20484 414 aaKnown RBP8.88□□□□□ -0.99
YDR170W-AYDR170W-A ILV3P39522 585 aaKnown RBP8.86□□□□□ -0.99
YDR170W-AYDR170W-A MPC54Q08550 464 aa8.84□□□□□ -0.99
YDR170W-AYDR170W-A TRK1P12685 1235 aa8.78□□□□□ -1
YDR170W-AYDR170W-A NMA111P53920 997 aa8.77□□□□□ -1.01
YDR170W-AYDR170W-A COQ8P27697 501 aa8.75□□□□□ -1.01
YDR170W-AYDR170W-A RAM2P29703 316 aa8.75□□□□□ -1.01
YDR170W-AYDR170W-A YPR015CQ12531 247 aa8.74□□□□□ -1.01
YDR170W-AYDR170W-A AMS1P22855 1083 aa8.71□□□□□ -1.02
YDR170W-AYDR170W-A YGR273CP53329 174 aa8.69□□□□□ -1.02
YDR170W-AYDR170W-A DPL1Q05567 589 aa8.68□□□□□ -1.02
YDR170W-AYDR170W-A YPL062WQ02781 134 aa8.67□□□□□ -1.02
YDR170W-AYDR170W-A RAM1P22007 431 aa8.66□□□□□ -1.02
YDR170W-AYDR170W-A SLI15P38283 698 aa8.66□□□□□ -1.02
YDR170W-AYDR170W-A GYP1Q08484 637 aa8.63□□□□□ -1.03
YDR170W-AYDR170W-A SDH2P21801 266 aa8.56□□□□□ -1.04
YDR170W-AYDR170W-A ISU2Q12056 156 aa8.56□□□□□ -1.04
YDR170W-AYDR170W-A NOP53Q12080 455 aaKnown RBP8.55□□□□□ -1.04
YDR170W-AYDR170W-A SAS4Q04003 481 aa8.53□□□□□ -1.04
YDR170W-AYDR170W-A YEL077CQ3E7X8 1277 aa8.5□□□□□ -1.05
YDR170W-AYDR170W-A PDR1P12383 1068 aa8.44□□□□□ -1.06
YDR170W-AYDR170W-A CDC73Q06697 393 aa8.44□□□□□ -1.06
YDR170W-AYDR170W-A KEX1P09620 729 aa8.42□□□□□ -1.06
YDR170W-AYDR170W-A MRF1P30775 413 aaPredicted RBP8.39□□□□□ -1.07
YDR170W-AYDR170W-A BRE2P43132 505 aa8.39□□□□□ -1.07
YDR170W-AYDR170W-A GAR1P28007 205 aaKnown RBP8.36□□□□□ -1.07
YDR170W-AYDR170W-A GBP2P25555 427 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
YDR170W-AYDR170W-A GCR2Q01722 534 aa8.32□□□□□ -1.08
YDR170W-AYDR170W-A AIR1P40507 360 aaKnown RBP8.29□□□□□ -1.08
YDR170W-AYDR170W-A BUD20Q08004 166 aaPredicted RBP8.27□□□□□ -1.09
YDR170W-AYDR170W-A PRT1P06103 763 aaKnown RBP8.26□□□□□ -1.09
YDR170W-AYDR170W-A YLR326WQ06170 240 aaKnown RBP8.25□□□□□ -1.09
YDR170W-AYDR170W-A ERG12P07277 443 aa8.23□□□□□ -1.09
YDR170W-AYDR170W-A CLA4P48562 842 aa8.23□□□□□ -1.09
YDR170W-AYDR170W-A RPP1BP10622 106 aaKnown RBP8.21□□□□□ -1.1
YDR170W-AYDR170W-A UBP14P38237 781 aaKnown RBP8.21□□□□□ -1.1
YDR170W-AYDR170W-A PCS60P38137 543 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
YDR170W-AYDR170W-A CST6P40535 587 aa8.2□□□□□ -1.1
YDR170W-AYDR170W-A VHR2P40041 505 aa8.17□□□□□ -1.1
YDR170W-AYDR170W-A STR2P47164 639 aa8.16□□□□□ -1.1
YDR170W-AYDR170W-A RAD54P32863 898 aa8.15□□□□□ -1.1
YDR170W-AYDR170W-A MET22P32179 357 aa8.14□□□□□ -1.11
YDR170W-AYDR170W-A LAM6Q08001 693 aa8.14□□□□□ -1.11
YDR170W-AYDR170W-A YRR1Q12172 810 aa8.13□□□□□ -1.11
YDR170W-AYDR170W-A ISM1P48526 1002 aa8.12□□□□□ -1.11
YDR170W-AYDR170W-A ENV9Q08651 330 aa8.12□□□□□ -1.11
YDR170W-AYDR170W-A CDC4P07834 779 aa8.1□□□□□ -1.11
YDR170W-AYDR170W-A PEX21P50091 288 aa8.07□□□□□ -1.12
YDR170W-AYDR170W-A NUD1P32336 851 aa8.06□□□□□ -1.12
YDR170W-AYDR170W-A FRK1Q03002 865 aaPredicted RBP8.04□□□□□ -1.12
YDR170W-AYDR170W-A YDR444WQ04093 687 aa8.03□□□□□ -1.12
YDR170W-AYDR170W-A GAP1P19145 602 aaPredicted RBP8.03□□□□□ -1.12
YDR170W-AYDR170W-A SPT16P32558 1035 aaKnown RBP8.03□□□□□ -1.12
YDR170W-AYDR170W-A TFB4Q12004 338 aa8.01□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-DR4O74302 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-HP0C2I4 478 aaKnown RBP8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-AP0CX57 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-PR1P0CX58 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-ORP0CX59 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-PR2P0CX60 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-DR5P0CX65 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-ER2P0CX66 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-GR3P0CX67 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-LR1P0CX68 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-MR2P0CX69 440 aa8□□□□□ -1.13
YDR170W-AYDR170W-A NPL4P33755 580 aa8□□□□□ -1.13
YDR170W-AYDR170W-A TY1A-JR2P47099 440 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms